Details from NCBI annotation

Gene Symbol Hps4
Gene Name Hermansky-Pudlak syndrome 4, transcript variant X4
Entrez Gene ID 101714464

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HPS4 ENSCPOG00000000355 (Guinea pig)

Gene Details

Hermansky-Pudlak syndrome 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000312, Guinea pig)

Protein Percentage 83.95%
CDS Percentage 87.69%
Ka/Ks Ratio 0.38283 (Ka = 0.0979, Ks = 0.2557)

HPS4 ENSG00000100099 (Human)

Gene Details

Hermansky-Pudlak syndrome 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000381213, Human)

Protein Percentage 71.79%
CDS Percentage 79.2%
Ka/Ks Ratio 0.38769 (Ka = 0.1853, Ks = 0.4779)

Hps4 ENSMUSG00000042328 (Mouse)

Gene Details

Hermansky-Pudlak syndrome 4 homolog (human)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000107978, Mouse)

Protein Percentage 63.64%
CDS Percentage 72.33%
Ka/Ks Ratio 0.32542 (Ka = 0.2605, Ks = 0.8004)

Genome Location

Sequence Coding sequence

Length: 2118 bp    Location: 3033640..3004370   Strand: -
>XM_004843347.1
ATGGCCGCCTCCACCTCTCCAGGGACAAAGTCAGCCTCTTGGTGGAGTTATTTTTTTCTTTATGATGGTTCCAAGGTGAAGGAGGAAGGAGATCCAACCAGAGCTGGCATTTGTTACTTTTATCCTTCTCAGACCGTTCTGGACTGTCAGGAGCTGCTCTGTGGGCAGATTGCTGGAGTTGTCCGCTGTGTCTCTGACATTTCTGGCTCTTCTCCCACTCTCATTCGCCTGCGGAAACTGAAGTTTGCCGTAAAGGTTGAAGAAGATTACCTCTGGGTGCTGGGCTGTGCTGTGGAGCTCCCCGATATCAGCTGCAAGCAGTTCCTAGATCAGCTCATTGGATTCTTTAATTTTTACAATGGTCCCGTTTCCCTGGCTTATAAGAACCATTCTCAGGAGGAACTGAGTTTGCAGTGGGACACTTTCATTGAGCAAGTTCTGAAAAACACCAGTGATCTGCATAAGATATTCAATTCCCTCTGGAACCTGGATCAAACCAAAGTGGAGCCCCTGCTGTTGCTGAAGGCAGCCCTCATTTTGCAGACCTGCCAGCGCTCGCCTCACATTCTAGCTGGCTGCATCCTGTATAAAGGACTGATTGTAAGCACCCAGCTGGCACCCTCCCTCACTGCCAAGATCCTGCTTCACAGACCTGCACCTCTGGACCAGAGACTACCTGCAGCAGGGGACGCACCACGGGACCCAGGAGCAGCATTCCCCCTGAATGTCCAGATCACCCCCGTTTTCCTGACCGAAGAGGAAGCTGCCAGTCTCCATGAGTTCCCAGTGGAGCAGATGCCCAGGCCAGCCAGACTTCAGGATGGCACAGTCCAGCATCTTGCAAAGGATTGGAGCACATCTGCTTTAAAAAAAGATGCCGCCAGGCAAGTGGCCTCCGAGGCTCAGATGTCAGCTGCCACCCTGGACCCCATGTCCCCTGACAGAGTGTGGCCAAATGGCAAGGGAGAGAATGGACATTTACCTGGCCATGAGATGGAGGACTGGGGGCCCACAGGACTACACACTACTGCCAAGGGCCAGGTCCCTGGCCTCAGCTGCCCTCTGCACAAGGAACCAGGCTTTCCCCAGGAGGAGACTGACTTGTCTGAAATCCACATTCCAGAAGCTCAGGAAGTAGGAGGATCCTCAGGTCATTATACCTTCCTACAAATGTATGCCCCGGGTGGCAGAGGTCTTTACCATGAGCACCCTGTCAGTGATGCCAGCAACCTGGAACCCATGCCATCTGAGGACATGGCTACCAGCTGCAGTCTCTCTGCCTCACTTGATGTGCTCACCCAGAATGGAGCCCAAGAGCAGCATGAAGACCTTCCTGGTACCAGCAACCACAGCCTTGTTCCTGGAACAGACCCCCTCCCCACACAGACCAGCTGGCCATTGTCGCCTCACCCAGATCCAGAGCAGAAAGGAAGCAAGCTTCTTGGGGGGCACCAAGGTGTAGATCAGCAGGTTGATGGAGTCCGTGAGAGCCTCGCAGCCACTGGTTTACAATGCATTTCAGATTCAGCAGACTCCCAGGGTGATAACCCCTCTACAGACAGAGCTGACCCCAGGCTGACCCCAGTAGGGGGCCCCATGAGACTCGTGCAGATGAACCTCTACACTCACAGTGTTAAGGGGTTGATGCTGTCGCTGCTGGCTGAGGCACCACTGCTAAGAGACAGCTCAGCCATCGAGGAGGTGTACCACAGCAGCCTGGCGTCCCTGAATGGACTGGAGGTGCACCTGAAGGAGACGCTGCCCAGAGACCAAGCTGGTCCCTCAGCCAGCACCTACAGCTTCGTGCACCACGACCACATCCAGAACGTGCTCACGGCCAACCTTCCCCCGGTGGCCTCAGCCCAAGACCGCCACTTCCTCCAAGCCATCAGCCTCATGCACTCGGACTTCGCCCAGCAGCCCACACTGTACGAGATGACCGTCAGGAACGCCTCCACGGCTGTGTATGCCTGCTGCAGCCCTGCCCAAGAGACCTACTTCCAGCCACTGATGTCCGACACCCGGAGCTCCGGCTTCCCGAACCCACAGGATGGAGCCTTCAGCCTGGCGGGCAAAGCCAAGCAGAAGCTGCTGAAGCATGGAGTAAACTTGCTGTGA

Related Sequences

XP_004843404.1 Protein

Hps4 PREDICTED: Hermansky-Pudlak syndrome 4 protein isoform X4 [Heterocephalus glaber]

Length: 705 aa      View alignments
>XP_004843404.1
MAASTSPGTKSASWWSYFFLYDGSKVKEEGDPTRAGICYFYPSQTVLDCQELLCGQIAGVVRCVSDISGSSPTLIRLRKLKFAVKVEEDYLWVLGCAVELPDISCKQFLDQLIGFFNFYNGPVSLAYKNHSQEELSLQWDTFIEQVLKNTSDLHKIFNSLWNLDQTKVEPLLLLKAALILQTCQRSPHILAGCILYKGLIVSTQLAPSLTAKILLHRPAPLDQRLPAAGDAPRDPGAAFPLNVQITPVFLTEEEAASLHEFPVEQMPRPARLQDGTVQHLAKDWSTSALKKDAARQVASEAQMSAATLDPMSPDRVWPNGKGENGHLPGHEMEDWGPTGLHTTAKGQVPGLSCPLHKEPGFPQEETDLSEIHIPEAQEVGGSSGHYTFLQMYAPGGRGLYHEHPVSDASNLEPMPSEDMATSCSLSASLDVLTQNGAQEQHEDLPGTSNHSLVPGTDPLPTQTSWPLSPHPDPEQKGSKLLGGHQGVDQQVDGVRESLAATGLQCISDSADSQGDNPSTDRADPRLTPVGGPMRLVQMNLYTHSVKGLMLSLLAEAPLLRDSSAIEEVYHSSLASLNGLEVHLKETLPRDQAGPSASTYSFVHHDHIQNVLTANLPPVASAQDRHFLQAISLMHSDFAQQPTLYEMTVRNASTAVYACCSPAQETYFQPLMSDTRSSGFPNPQDGAFSLAGKAKQKLLKHGVNLL