Details from NCBI annotation

Gene Symbol Tbx1
Gene Name T-box 1
Entrez Gene ID 101717395

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TBX1 ENSCPOG00000012532 (Guinea pig)

Gene Details

T-box 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011276, Guinea pig)

Protein Percentage 84.62%
CDS Percentage 82.78%
Ka/Ks Ratio 0.19815 (Ka = 0.1217, Ks = 0.6144)

TBX1 ENSG00000184058 (Human)

Gene Details

T-box 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000331791, Human)

Protein Percentage 96.54%
CDS Percentage 91.12%
Ka/Ks Ratio 0.02146 (Ka = 0.0154, Ks = 0.7189)

Tbx1 ENSMUSG00000009097 (Mouse)

Gene Details

T-box 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000009241, Mouse)

Protein Percentage 89.9%
CDS Percentage 85.29%
Ka/Ks Ratio 0.05603 (Ka = 0.0529, Ks = 0.9445)

Tbx1 ENSRNOG00000001892 (Rat)

Gene Details

T-box 1 (Tbx1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002597, Rat)

Protein Percentage 92.44%
CDS Percentage 86.2%
Ka/Ks Ratio 0.03493 (Ka = 0.0357, Ks = 1.022)

Genome Location

Sequence Coding sequence

Length: 1641 bp    Location: 387462..395502   Strand: +
>XM_004843257.1
ATGGACGCGCGCAGCCCGCTGTCTCCCCGGGCCAGTGCGTTCAGCATCGCCTCTCTGGTTGCAGCCGAGGCCTCGGAGGGCACCGCCCACCGGGGCCCCGGGTCCTCTGACCAGGCGAAGCTTCCCTGGCTATCGAGATCCCCCGCCGGGATGCACTTCAGCACAGTCACCAGGGACATGGAAGCCTTCACGGCCAGCAGCCTGAGCAGCCTGGGGGCCGCGGGGGGCTTCCCGGGCGCCGCGTCGCCGGGCGCCGACCCGTACGGCCCGCGAGAGCCCCCGCCGCCGCGCTACGACCCGTGCGCCGCCGCCGTCCCCGGGGCCCCCGGCCCGCCGCCGCCGCACGCCTACCCGTTCGCTCCCGCTGCCGGGGCCGCCACCAGCGCCGCCTCCGAGCCCGAGGGCCCCGGGTCCAGCTGCGCGGCCGCCGCCAAGGCGCCGGTGAAGAAAAACGCGAAGGTGGCCAGCGTGAGCGTGCAGCTGGAGATGAAGGCGCTGTGGGACGAGTTCAATCAGCTGGGCACGGAGATGATCGTCACCAAGGCCGGCAGGCGAATGTTCCCCACGTTCCAAGTGAAGCTCTTCGGCATGGACCCTATGGCCGACTACATGCTGCTTATGGACTTTGTGCCAGTGGACGACAAACGGTACCGGTACGCCTTCCACAGCTCCTCCTGGCTGGTGGCCGGCAAGGCGGACCCTGCCACTCCGGGCCGCGTGCACTACCACCCAGACTCGCCGGCCAAGGGTGCACAGTGGATGAAGCAAATAGTGTCCTTTGACAAGCTCAAGCTGACCAACAACTTGCTGGATGACAACGGCCACATTATTCTCAACTCCATGCACAGATACCAGCCCCGCTTCCACGTTGTCTATGTGGATCCACGAAAAGACAGCGAGAAGTATGCAGAGGAGAACTTCAAAACCTTTGTGTTCGAGGAGACGCGCTTCACCGCGGTTACTGCTTATCAGAACCACCGGATCACGCAGCTAAAGATTGCCAGCAACCCTTTCGCCAAAGGCTTCCGGGACTGCGACCCTGAGGACTGGCCGCGGAACCACCGGCCTGGAGCGCTGCCGCTCATGAGCGCCTTTGCGCGCTCCAGGAACCCCGTGGCCTCCCCCACGCAGCCCAACGGCGCAGAGAAAGACGCGGCCGAGGCCCGGAGAGAATTCGATCGCGAAGGGGGCGGGTCAGCCATGCTCGGGGACCCTGCACATCCGCCGCAGCTGCTGGCTCGGGTGCTGAGCCCCGCGGTGCCTGGGGCCGGCGGTGCGGGCGGCCTCGTTCCCCTTCCCGGTGCGCCCGGAGGCCGGCCCAGCCCCCCTCACCCGGAGCTGCGCCTGGAGGCGCCCGGCGCGTCGGAGCCGCTGCATCACCATCCCTACAAATACCCGGCCACCGCCTACGACCACTACCTCGGGGCCAAGAGCCGGCCGGCGCCCTACCCGCTGCCCGGCCTCCGCGGCCACGGTTACCACCCGCACGCGCACGCACATCCGCACCACCACCACCCAGCCGTGAGCCCGGCCGCCGCCGCCGCCGCAGCCGCCGCGGCTGCCGCCGCCGCCGCGGCTGCCAACATGTACTCGTCTGCTGGGGCCGCGCCGCCGGGCTCCTACGACTACTGCCCCAGATAA

Related Sequences

XP_004843314.1 Protein

Tbx1 PREDICTED: T-box transcription factor TBX1 [Heterocephalus glaber]

Length: 546 aa      View alignments
>XP_004843314.1
MDARSPLSPRASAFSIASLVAAEASEGTAHRGPGSSDQAKLPWLSRSPAGMHFSTVTRDMEAFTASSLSSLGAAGGFPGAASPGADPYGPREPPPPRYDPCAAAVPGAPGPPPPHAYPFAPAAGAATSAASEPEGPGSSCAAAAKAPVKKNAKVASVSVQLEMKALWDEFNQLGTEMIVTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLVAGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRFHVVYVDPRKDSEKYAEENFKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRDCDPEDWPRNHRPGALPLMSAFARSRNPVASPTQPNGAEKDAAEARREFDREGGGSAMLGDPAHPPQLLARVLSPAVPGAGGAGGLVPLPGAPGGRPSPPHPELRLEAPGASEPLHHHPYKYPATAYDHYLGAKSRPAPYPLPGLRGHGYHPHAHAHPHHHHPAVSPAAAAAAAAAAAAAAAAANMYSSAGAAPPGSYDYCPR