Sequence details NCBI ID: XM_004842585.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Clic6
Gene Name chloride intracellular channel 6
Entrez Gene ID 101713305

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLIC6 ENSG00000159212 (Human)

Gene Details

chloride intracellular channel 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000290332, Human)

Protein Percentage 70.33%
CDS Percentage 77.59%
Ka/Ks Ratio 0.27438 (Ka = 0.1964, Ks = 0.7159)

Clic6 ENSMUSG00000022949 (Mouse)

Gene Details

chloride intracellular channel 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023670, Mouse)

Protein Percentage 68.0%
CDS Percentage 74.55%
Ka/Ks Ratio 0.24192 (Ka = 0.2262, Ks = 0.935)

Clic6 ENSRNOG00000026870 (Rat)

Gene Details

chloride intracellular channel 6 (Clic6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000033206, Rat)

Protein Percentage 65.93%
CDS Percentage 73.99%
Ka/Ks Ratio 0.27722 (Ka = 0.2436, Ks = 0.8788)

Genome Location

Sequence Coding sequence

Length: 1662 bp    Location: 22815951..22860012   Strand: +
Raw sequence   
>XM_004842585.1
ATGGCTGAGGCCGCGGAGCCCGAGGGTGGCGCTCCGGGTCCCCAGGGGCCGCCTGAGGACCCAGCGATTCTGGCAGCGGGATCGGAGGCAGAGGGACAGGAGGCTGGCGAGGGCGCAGCAGCGGAGCCCAGCGGCGAGGGGACGCGCGCGGTGGAGGAGGAAGGCGGCGGCGGGAGGGACGCGGGGCGCGCGGGCGAGGGAGGGGACCCGGGGGCAGAGGCGCAGGGCTCGAGGGGAGCGCAGGGCGGGGAGGAGACCCAGGACGGCGCCCAGGACGGCGCCCAGGACGGCCCCGCGGTGCCCCCGGCAGGGAAGGAGGCGGGCGGCGCCGAGCAGGTGGAAGAGGCCTCGGGGGAGGCTCAGGGGGACCCGGGGGACCCCGCGGCCCCGGAGGCGCACGAGGAAGCGGAGCGAGGGCTGGAGGAGCCACCGGGGTTTCGCCTAGACGCCCAGGGACCGGCAGGGGACAGCATGGAAGCTGAGGCGCCGGCGGGAGGGGCGCACGGGGTGGAGAACGAGCCCCCGGCGGAGGAGAGCGCGGACCCCAGCCCGGGGGAGCCTAGGGAGGCTTTGGGGGAGGACGAGGCGGCGGAGAGCGGGTCCCCGGGGGCAGAGGAGTCGGAGGACGCGGTCCCCGGGGACGCGAGGGCAGACGCTGGCGAGAATGGTGACCCGGGGGGGCTCCGGGAGGAGACCGGGGAGGAGCAAGGGGAGGGGGAGCCGAGCCCCGGGGGGGCCCGCGAGGAAGCCACACTGGGGCGCGAGGAGCGGCCCCCCGACGGCCGCCGCCATGGGCAGGCGGCTGAGTCCAGTGAGGGTGAGGAGCCGCAGCCCCAGCTCAGCAACCACCTGGCGGAGGAGGGCAGCGCCCAGGGCGGCGAGGAGTCCGCGCCAGTAAATGGCGGCGGGGAGGACGGCGAAGCGGCCCAGGAGGGGGACCCGGGACAGGAGCATGACATCACCCTCTTCGTCAAGGCTGGTTATGATGGTGAGAGTATTGGAAACTGCCCATTTTCTCAGCGTCTCTTTATGATTCTCTGGCTAAAGGGTGTTATATTTAATGTCACAACCGTGGATCTGAAAAGGAAGCCCCTGGACCTGCAAAACCTGGCTCCTGGAGCAAACCCGCCTTTTATGACTTTTGATGGTGAAGTCAAGACGGATGTGAATAAGATTGAGGAGTTCTTAGAGGAGAAGTTAGCACCCCCAAGGTACCCTAAGCTGGGGACCCAACACCCTGAATCTAACTCTGCAGGAAATGATGTGTTTGCCAAATTCTCAGCATTTATTAAAAACACCAAGAAGGATGCACATGAGATTTATGAAAAGAACCTGTTACGGGCCCTGAAGAAGCTGGATAATTACTTAAACAGCCTTCTGCCCGATGAAATAGACACCAACAGCACAGAGGATGTCACTGTTTCGGGCAGGAAGTTCCTGGACGGGGATGAGCTCACACTGGCCGACTGTAACCTCTTACCCAAGCTCCACATTATTAAGATTGTGGCCAAGAAATACAGAGATTTTGAGTTTCCTCCTGAAATGACTGGCATCTGGAGATACTTGGACAATGCTTATGCTAGGGATGAATTCACAAATACGTGTCCAGCTGACCGGGAGATTGAACATGCGTATTCAGATGTTGCCAAAAGGATGAAGTGA

Related Sequences

XP_004842642.1 Protein

Clic6 PREDICTED: chloride intracellular channel protein 6 [Heterocephalus glaber]

Length: 553 aa      
>XP_004842642.1
MAEAAEPEGGAPGPQGPPEDPAILAAGSEAEGQEAGEGAAAEPSGEGTRAVEEEGGGGRDAGRAGEGGDPGAEAQGSRGAQGGEETQDGAQDGAQDGPAVPPAGKEAGGAEQVEEASGEAQGDPGDPAAPEAHEEAERGLEEPPGFRLDAQGPAGDSMEAEAPAGGAHGVENEPPAEESADPSPGEPREALGEDEAAESGSPGAEESEDAVPGDARADAGENGDPGGLREETGEEQGEGEPSPGGAREEATLGREERPPDGRRHGQAAESSEGEEPQPQLSNHLAEEGSAQGGEESAPVNGGGEDGEAAQEGDPGQEHDITLFVKAGYDGESIGNCPFSQRLFMILWLKGVIFNVTTVDLKRKPLDLQNLAPGANPPFMTFDGEVKTDVNKIEEFLEEKLAPPRYPKLGTQHPESNSAGNDVFAKFSAFIKNTKKDAHEIYEKNLLRALKKLDNYLNSLLPDEIDTNSTEDVTVSGRKFLDGDELTLADCNLLPKLHIIKIVAKKYRDFEFPPEMTGIWRYLDNAYARDEFTNTCPADREIEHAYSDVAKRMK