Details from NCBI annotation

Gene Symbol Itsn1
Gene Name intersectin 1 (SH3 domain protein)
Entrez Gene ID 101712226

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ITSN1 ENSCPOG00000000709 (Guinea pig)

Gene Details

intersectin 1 (SH3 domain protein)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000630, Guinea pig)

Protein Percentage 90.65%
CDS Percentage 88.92%
Ka/Ks Ratio 0.23186 (Ka = 0.0698, Ks = 0.3012)

ITSN1 ENSG00000205726 (Human)

Gene Details

intersectin 1 (SH3 domain protein)

External Links

Gene Match (Ensembl Protein ID: ENSP00000370719, Human)

Protein Percentage 96.61%
CDS Percentage 91.55%
Ka/Ks Ratio 0.05782 (Ka = 0.0192, Ks = 0.3325)

Itsn1 ENSMUSG00000022957 (Mouse)

Gene Details

intersectin 1 (SH3 domain protein 1A)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000109635, Mouse)

Protein Percentage 93.99%
CDS Percentage 87.99%
Ka/Ks Ratio 0.0651 (Ka = 0.0332, Ks = 0.5099)

Itsn1 ENSRNOG00000002001 (Rat)

Gene Details

intersectin 1 (SH3 domain protein) (Itsn1), transcript variant 2, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000045513, Rat)

Protein Percentage 91.3%
CDS Percentage 86.02%
Ka/Ks Ratio 0.08525 (Ka = 0.0492, Ks = 0.5773)

Genome Location

Sequence Coding sequence

Length: 4962 bp    Location: 21906153..22055113   Strand: +
>XM_004842583.1
ATGGCTCAGTTTCCAACACCTTTTGGTGGCAGCCTGGATATCTGGGCCATAACGGTAGAGGAAAGAGCGAAGCATGATCAGCAGTTCCATAGTTTAAAGCCAATATCTGGATTTATTACTGGTGATCAAGCAAGGAATTTTTTTTTTCAATCTGGGTTACCTCAGCCTGTCTTAGCACAGATATGGGCACTGGCTGACATGAATAACGATGGAAGAATGGATCAAGTGGAGTTTTCCATAGCAATGAAGCTTATCAAACTGAAGCTACAAGGCTATCAGCTCCCCTCTGCACTTCCTCCCATCATGAAACAGCAGCCGGTTGCTATTTCTAGTGCACCAGCATTTGGAATTGGAAACAGCAAAATATTAGTTAAAATGAGAGAGTTGTTGCAGTGGCACTCACAGCAGAATAGATCGTGTGTCCCTCCAGCAGCAGAATGGGCTGTGCCTCAGTCCTCAAGACTGAAATACAGGCAGTTATTCAATAGTCATGACAAAACTATGAGTGGACACTTAACAGGTCCCCAAGCAAGAACTATTCTTATGCAATCAAGTTTACCACAGGCTCAACTGGCTTCAATATGGAATCTTTCTGACATTGATCAAGATGGAAAACTCACAGCAGAAGAATTTATCCTGGCTATGCACCTAATTGATGTTGCTATGTCTGGCCAGCCACTGCCACCTGTCCTGCCTCCAGAATACATTCCACCTTCCTTTAGAAGAGTCCGGTCTGGCAGTGGGATATCTGTCATCAGCTCAGCATCTGTAGATCAGAGGTTACCAGAGGAGCCAGCTTTAGAGGATGAACAGCAACAATTAGAAAAGAAATTACCTGTGACATTTGAAGACAAGAAGAGGGAGAATTTCGAACGTGGCAATCTGGAGCTGGAGAAACGGAGACAAGCGCTCTTGGAGCAGCAGCGCAAAGAACAAGAGCGTTTGGCTCAGCTGGAGCGGGCTGAGCAGGAAAGGAAGGAGCGGGAGCGCCAGGAACAAGAGCGCAAACGACAGCTGGAGCTGGAGAAGCAGCTGGAAAAGCAACGGGAGCTCGAACGGCAGAGAGAGGAAGAAAGGAGGAAAGAAATAGAGAGGCGAGAGGCTGCAAAACGAGAGCTTGAAAGGCAACGACAGCTTGAATGGGAACGGAATCGAAGGCAAGAACTTCTAAATCAAAGAAACAAAGAACAGGAGGATATAGTTGTCCTGAAAGCAAAGAAAAAAACTTTGGAATTTGAATTAGAAGCTCTAAATGATAAAAAACATCAACTAGAAGGAAAACTGCAAGATATCAGATGTCGATTGGCCACTCAAAGGCAAGAAATTGAGAGTACAAACAAATCTAGAGAGTTGAGAATTGCTGAAATCACTCACTTACAGCAACAATTACAGGAATCTCAGCAAATGCTTGGAAGACTTATTCCAGAAAAGCAGGTACTCAATGACCAGTTAAAACAAGTTCAGCAGAACAGCTTGCACAGAGATTCGCTTCTTACACTCAAAAGAGCCTTAGAAGCAAAAGAACTAGCTCGGCAGCGGCTACGAGACCAACTGGATGAGGTGGAGAAGGAAACTAGGTCAAAACTGCAGGAGATTGATATTTTCAATAACCAGCTGAAGGAACTAAGAGAAATTCATAATAAGCAGCAACTCCAGAAGCAAAAGTCCATAGAAGCTGAACGATTGAAGCAGAAAGAACAGGAGCGAAAAATCATAGAATTAGAAAAGCAAAAAGAGGAAGCCCAAAGACGAGCTCAGGAAAGGGACAAACAGTGGTTGGAGCATGTGCAGCAGGAGGATGAGCATCAGCGGCCAAGAAAACTTCATGAGGAGGACAAGCTAAAAAGGGAAGAGAGTGTCAAAAAGAAGGATGGTGAGGACAAAGGCAAACCAGAACCTCAAGAGAAGCTGAGTTGGCTTTTCCATCCACACCAAGAATCTGTTAAACCAGCTGTGCAGGCTCCTTGGTCCACCACAGAAAAAGGCCCTCTTACAATTTCTGCACAGGAGAATGTAAAAGTGGTGTATTACCGAGCTCTGTACCCCTTTGAATCCAGAAGCCACGATGAAATCACCATCCAGCCTGGAGATATAGTCATGGTTAAAGGGGAATGGGTGGATGAAAGTCAAACTGGAGAACCAGGGTGGCTTGGAGGAGAATTAAAAGGAAAGACAGGATGGTTTCCTGCAAACTATGCAGAGAAGATTCCAGAAAATGAGATTCCTCCTCCAGCCAAACCAGTGACTGATTCTGCATCCACCCCTGCCCCCAAACTGGCTTTGCGTGAGACCCCTGCTCCCTTGGCAGTGACCGCTTCTGAGCCCTCCACAACCTCTAACAACTGGGCCGACTTCAGTTCCACGTGGCCCAGCAACACGAATGAAAAACCTGAAACAGACAACTGGGATGCATGGGCAGCCCAGCCTTCTCTTACCGTCCCCAGTGCTGGCCAGCTAAGGCAGAGATCAGCCTTTACTCCAGCCACAGCCACTGGCTCCTCCCCGTCTCCTGTGCTGGGCCAGGGTGAAAAGGTGGAGGGGCTACAAGCGCAAGCCCTGTATCCTTGGAGAGCCAAAAAAGACAACCATTTAAACTTTAATAAAAACGATGTCATCACCGTCCTGGAACAGCAAGATATGTGGTGGTTTGGAGAAGTTCAAGGTCAGAAGGGTTGGTTCCCCAAGTCTTACGTGAAACTCATTTCAGGGCCCATAAGGAAATCTACAAGTATGGAATCTGGTTCTTCAGAAAGTCCTGCTAGTATGAAGAGAGTAGCTTCCCCAGCAACCAAGCTGGCTGTGTCGGGTGAAGAATTTATTGCCATGTACACTTACGAGAGTTCTGAGCAAGGAGATTTAACCTTTCAGCAAGGGGATGTGATTTTGGTTACCAAGAAAGATGGTGACTGGTGGACAGGAACAGTGGGCGACAAGTCCGGAGTCTTCCCTTCTAACTATGTGAGGCTTAAAGATTCAGAGGGCTCTGGAACTGCTGGGAAAACAGGGAGTTTAGGAAAAAAACCTGAAATTGCTCAAGTTATTGCCTCCTACACTGCTACTGGTCCCGAGCAACTTACTCTGGCCCCTGGTCAGCTGATTTTGATCCGAAAAAAGAATCCAGGTGGATGGTGGGAAGGAGAGCTGCAAGCACGTGGAAAAAAGCGCCAAATAGGCTGGTTCCCAGCTAACTATGTCAAACTTCTAAGCCCTGGGACAAGCAAAATCACTCCAACAGAACTACCCAAGTCAGCAGCATTGCCAGCAGTGTGCCAGGTGATTGGGATGTACGATTACACGGCTCAGAACGACGACGAGCTGGCCTTCAACAAGGGCCAGATCATCAACGTTCTCAACAAAGAGGACCCTGACTGGTGGAAAGGGGAAGTCAACGGGCAAGTGGGGCTCTTCCCATCCAACTATGTGAAGCTGACCACGGACATGGACCCCAGCCAGCAATGGTGTTCAGATTTACATCTCTTGGATATGTTGACCCCGACTGAAAGAAAACGACAAGGATACATCCACGAACTCATTGTCACAGAGGAGAACTACGTGAACGACCTGCAGCTGGTCACAGAGATCTTTCAGAAACCCCTGATGGAGTCTGAGCTGCTGACAGAGAAAGAGGTTGCTATGATTTTTGTTAACTGGAAGGAGCTGATAATGTGTAATATCAAACTACTGAAAGCGCTGAGAGTCCGCAAGAAGATGTCTGGGGAGAAGATGCCCGTGAAGATGATCGGTGACATTCTGAGCGCCCAGCTGCCACACATGCAGCCATACATCCGCTTCTGCAGCTGCCAGCTCAATGGGGCTGCCCTAATCCAGCAGAAGACGGATGAGGCCCCGGACTTCAAGGAGTTTGTCAAGAGATTGGCAATGGACCCTCGATGTAAAGGGATGCCACTGTCTAGTTTTATACTGAAGCCTATGCAGCGGGTAACAAGATACCCACTGATCATTAAAAATATCCTGGAAAACACTCCTGAAAACCACCCTGACCACAGTCACTTGAAGCATGCACTGGAAAAGGCAGAAGAGCTGTGTTCCCAGGTGAACGAGGGGGTACGCGAGAAGGAGAACTCGGACCGGCTGGAGTGGATCCAAGCCCACGTGCAGTGTGAAGGCCTGTCTGAGCAACTGGTGTTCAACTCAGTGACCAACTGCTTGGGACCCCGAAAGTTTCTACACAGTGGGAAGCTCTACAAGGCCAAGAGCAACAAGGAGCTGTATGGTTTTCTTTTCAACGACTTCCTCCTGCTGACTCAAATCACAAAGCCCTTGGGGTCTTCTGGCACTGACAAAGTCTTCAGCCCCAAATCCAACCTGCAGTATAAAATGTACAAAACGCCTATTTTCCTAAATGAAGTTCTGGTAAAATTACCCACTGACCCCTCCGGAGATGAACCGATCTTCCACATTTCCCACATCGACAGAGTCTACACCCTCCGAGCAGAAAGTATCAATGAACGGACTGCCTGGGTGCAGAAAATCAAAGCTGCTTCTGAGCTCTACATAGAGACTGAGAAAAAGAAGCGGGAGAAAGCGTACCTTGTCCGTTCCCAAAGGGCAACAGGTATTGGAAGGCTGATGGTGAACGTTGTTGAAGGCATTGAGTTGAAGCCCTGTCGGTCCCATGGAAAGAGCAACCCATACTGCGAGGTGACCATGGGATCCCAGTGCCACATCACCAAGACAATCCAGGACACTCTCAACCCCAAGTGGAATTCCAACTGCCAGTTCTTCATCAGGGACCTGGAGCAGGAGGTTCTCTGTATCACCGTGTTCGAGAGGGACCAGTTCTCACCAGACGATTTTTTGGGTCGGACAGAAATCCGTGTGGCTGACATCAAGAAAGACCAGGGCCCCAAAGGGCCAGTTACCAAGTGTCTCCTGCTCCATGAGGTCCCCACGGGAGAGATTGTTGTCCGCCTGGACCTGCAGTTGTTTGATGAACCCTAG

Related Sequences

XP_004842640.1 Protein

Itsn1 PREDICTED: intersectin-1 [Heterocephalus glaber]

Length: 1653 aa      View alignments
>XP_004842640.1
MAQFPTPFGGSLDIWAITVEERAKHDQQFHSLKPISGFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLIKLKLQGYQLPSALPPIMKQQPVAISSAPAFGIGNSKILVKMRELLQWHSQQNRSCVPPAAEWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLIDVAMSGQPLPPVLPPEYIPPSFRRVRSGSGISVISSASVDQRLPEEPALEDEQQQLEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQREEERRKEIERREAAKRELERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEFELEALNDKKHQLEGKLQDIRCRLATQRQEIESTNKSRELRIAEITHLQQQLQESQQMLGRLIPEKQVLNDQLKQVQQNSLHRDSLLTLKRALEAKELARQRLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSIEAERLKQKEQERKIIELEKQKEEAQRRAQERDKQWLEHVQQEDEHQRPRKLHEEDKLKREESVKKKDGEDKGKPEPQEKLSWLFHPHQESVKPAVQAPWSTTEKGPLTISAQENVKVVYYRALYPFESRSHDEITIQPGDIVMVKGEWVDESQTGEPGWLGGELKGKTGWFPANYAEKIPENEIPPPAKPVTDSASTPAPKLALRETPAPLAVTASEPSTTSNNWADFSSTWPSNTNEKPETDNWDAWAAQPSLTVPSAGQLRQRSAFTPATATGSSPSPVLGQGEKVEGLQAQALYPWRAKKDNHLNFNKNDVITVLEQQDMWWFGEVQGQKGWFPKSYVKLISGPIRKSTSMESGSSESPASMKRVASPATKLAVSGEEFIAMYTYESSEQGDLTFQQGDVILVTKKDGDWWTGTVGDKSGVFPSNYVRLKDSEGSGTAGKTGSLGKKPEIAQVIASYTATGPEQLTLAPGQLILIRKKNPGGWWEGELQARGKKRQIGWFPANYVKLLSPGTSKITPTELPKSAALPAVCQVIGMYDYTAQNDDELAFNKGQIINVLNKEDPDWWKGEVNGQVGLFPSNYVKLTTDMDPSQQWCSDLHLLDMLTPTERKRQGYIHELIVTEENYVNDLQLVTEIFQKPLMESELLTEKEVAMIFVNWKELIMCNIKLLKALRVRKKMSGEKMPVKMIGDILSAQLPHMQPYIRFCSCQLNGAALIQQKTDEAPDFKEFVKRLAMDPRCKGMPLSSFILKPMQRVTRYPLIIKNILENTPENHPDHSHLKHALEKAEELCSQVNEGVREKENSDRLEWIQAHVQCEGLSEQLVFNSVTNCLGPRKFLHSGKLYKAKSNKELYGFLFNDFLLLTQITKPLGSSGTDKVFSPKSNLQYKMYKTPIFLNEVLVKLPTDPSGDEPIFHISHIDRVYTLRAESINERTAWVQKIKAASELYIETEKKKREKAYLVRSQRATGIGRLMVNVVEGIELKPCRSHGKSNPYCEVTMGSQCHITKTIQDTLNPKWNSNCQFFIRDLEQEVLCITVFERDQFSPDDFLGRTEIRVADIKKDQGPKGPVTKCLLLHEVPTGEIVVRLDLQLFDEP