Sequence details NCBI ID: XM_004842535.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Col6a2
Gene Name collagen, type VI, alpha 2, transcript variant X1
Entrez Gene ID 101711621

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 3063 bp    Location: 31246463..31272397   Strand: +
Raw sequence   
>XM_004842535.1
ATGCTGCGGGGCCCCTTCATGGCACTGCTGCTCGGGGGGCTCCTGGGGACTCTCCATGCCCAGCAGCAAGAGCTCATCTCACCTGACACTGTCACCTCTGAGAGGACAAACGGCTGCCCAGAGAAAACCGACTGCCCTGTCCACGTGTACTTCGTACTGGACACCTCTGAGAGTGTGGCCATGCAGTCGCCCACCGACAGCCTGCTCTACCACATGCAGCAGTTTGTGCCGCAGCTCATCAGCCAGCTGCAGAACGAGCTCTACCTGGACCAGGTGGCGCTCAGCTGGCGCTACGGCGGCCTGCACTTCTCCGACCAAGTGGAGGTCTTCAGCCCGCCAGGCAGTGACCGTGCCTCCTTCACCAAGAGCCTGCAGGGCATCAGCTCCTTCCGCCGAGGCACCTTTACCGACTGCGCGCTGGCCAACATGACACAGGAGATCCGCCGCTCGGGGCCCCGCGGCGTCAGCTTCGCCGTGGTCATCACTGACGGCCACGTCACGGGCAGCCCGTGCGGCGGCATTAAGCTGCAGGCCGAGCGGGCCCGTGACGAGGGCATCCGGCTCTTCGCTGTGGCGCCCAATCAGAACCTGAACGAGCAGGGCCTGCGGGACCTCGCCAGCACCCCCCACGAGCTCTACCGCAGCAACTACGCCACCATGCGGCCGGACTCTACTGAGATCGACCAGGACACCATCAACCGCATCATCAAGGTCATGAAGCACGAAGCCTACGGAGAGTGCTACAAGGTGAGCTGCCTGGAGATCCCTGGGCCACCCGGCCCCAAGGGCTACCGAGGACAGAAGGGTGCCAAGGGCAACATGGGTGAGCCAGGAGAGCCCGGCCAGAAGGGGCGACAGGGGGACCCCGGCATCGAAGGCCCCATCGGATTCCCAGGACCCAAGGGTGTGCCTGGCTTCAAAGGAGAGAAGGGAGAGTTTGGAGCCGACGGAAGGAAGGGGGCCCCCGGGCTGGCAGGCAAGAACGGCACCGATGGGCAGAAGGGCAAGCTGGGCCGAATTGGACCCCCGGGCTGCAAGGGAGACACCGGAGACCGGGGCCCTGACGGGTACACAGGGGACGCCGGCAGCCCAGGAGAGCAAGGAGACCAGGGCGCCAAGGGGGATGCTGGCCGCTCAGGACGCAGGGGCCCCCCCGGAGACCCCGGAGACAAAGGAAGCAAGGGTTACCAAGGCAACAATGGAGCCCCTGGAAGTCCGGGTGTGAAAGGAGCCAAGGGCGGACCTGGGCCCCGCGGACCCAAAGGCGAGCCTGGGCGCAGAGGAGACCCTGGAGCCAAGGGCAGCCCAGGCAGTGACGGCCCCAAGGGGGAGAAGGGGGATCCTGGCCCTGAGGGGCCCCGCGGCCTGACTGGAGAGGTTGGCGGCAAAGGAGCCAAGGGGGACCGAGGGCTGCCTGGACCCAGAGGCCCCCAGGGGGCTCTCGGGCAGCCGGGGAAGCAGGGATCTCGGGGAGACCCCGGTGATGCCGGGCCCCGAGGAGACTCAGGACAGCCAGGCCCTAAGGGAGACCCCGGCAGGCCTGGATTCAGCTACCCAGGACCCCGGGGGACACCGGGAGAGAGAGGAGAGCCTGGCCCGCCTGGCCCAGAGGGAGGTCGAGGAGACTTCGGCATGAAAGGAAGACCTGGGAGGAAAGGCGAAAAGGGGGAGCCCGCTGATCCTGGTCCCCATGGAGAACCGGGCCCTCGGGGGCCCAGAGGAGACCCGGGACCCGAGGGCGAGCCTGGCCCCCCTGGAGACCCTGGCCTCACGGAGTGCGACGTCATGACCTACGTGAGGGAGACCTGTGGGTGCTGTGACTGCGAGAAGCGCTGTGGCGCCCTGGACGTGGTCTTCGTCATCGACAGCTCCGAGAGCATCGGCTACACCAACTTCACCCTGGAGAAGAACTTCGTCATCAACGTGGTCAACAGGCTGGGGGCCATCGCCAAGGACCCCAAGTCGGAGACAGGGACGCGTGTGGGCGTGGTGCAGTACAGCCACGAGGGCACTTTCGAGGCCATCCAGCTGGACGACGAGCGCATCGACTCCCTGTCCAGCTTCAAGGAGGCCGTCAAGAACCTGGAGTGGATCGCGGGTGGCACCTGGACACCCTCTGCCCTCAAGTTCGCCTACAATCAGCTCATCAAGGAGAGCCGGCGCCAGAAGACGCGCGTGTTCGCCGTGGTCATCACGGATGGGCGCCATGACCCACGTGACGACGACCTCAACCTGCGGGCGCTGTGTGACCGTGATGTCACGGTGACGGCCATCGGGATCGGCGACATGTTCCACGAGAGGCACGAGAGCGAGAACCTCTACTCCATTGCCTGTGACAAGCCACAGCAGGTGCGCAACATGACACTCTTCTCTGACCTGGTGGCTGAGAAGTTCATCGATGACATGGAGGATGTGCTGTGCCCAGACCCGCAGATTGTGTGTCCAGAGCTTCCCTGCCAAACAGAGCTGTACGTGGCGCAGTGCACACAGCGGCCCGTGGACATTGTCTTCCTGCTGGATGGCTCCGAGCGGCTGGGCGAGCAGAACTTCCACAAGGTGCGGCGCTTCGTGGAGGAGGTGGCGCAGCGCCTGACTCTGGCGCGCAGGGACGACGACCCGCTCAACGCCCGGCTGGCGCTGCTGCAGTTCGGGGGCCCGCAGGAGCAGCAGCTGGCCTTCCCACTGACCGCCAACCTGACCGTCATCCGGGAGGCGCTGGAGGACGCCCGCTACCTCAACTCCTTCTCGCACGTGGGCACGGGCGTCGTGCACGCCATCAACCACGTGGTGCGCGGTGCCCGGGCCGGGGCGCGGCGGCACGCCGAGCTGTCCTTTGTGTTCCTCACCGACGGTGTCACTGGCAACGAGAGCCTGCAGGAGGCTGTGCACTCCATGCGCAAGCAGAACGTGGTGCCCACCGTGGTGGCTGTGGGCGGCGACGTGGACGAGCACGTGCTCGCCGAGATCAGCCTGGGGGACAGGGCCGCCATCTTCCGCGAGAAGGACTTCGACAGCCTAGCGCAGCCCAGGTTCTTCGACAGGTTCATCCGCTGGATCTGTTAG

Related Sequences

XP_004842592.1 Protein

Col6a2 PREDICTED: collagen alpha-2(VI) chain isoform X1 [Heterocephalus glaber]

Length: 1020 aa      
>XP_004842592.1
MLRGPFMALLLGGLLGTLHAQQQELISPDTVTSERTNGCPEKTDCPVHVYFVLDTSESVAMQSPTDSLLYHMQQFVPQLISQLQNELYLDQVALSWRYGGLHFSDQVEVFSPPGSDRASFTKSLQGISSFRRGTFTDCALANMTQEIRRSGPRGVSFAVVITDGHVTGSPCGGIKLQAERARDEGIRLFAVAPNQNLNEQGLRDLASTPHELYRSNYATMRPDSTEIDQDTINRIIKVMKHEAYGECYKVSCLEIPGPPGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEGPIGFPGPKGVPGFKGEKGEFGADGRKGAPGLAGKNGTDGQKGKLGRIGPPGCKGDTGDRGPDGYTGDAGSPGEQGDQGAKGDAGRSGRRGPPGDPGDKGSKGYQGNNGAPGSPGVKGAKGGPGPRGPKGEPGRRGDPGAKGSPGSDGPKGEKGDPGPEGPRGLTGEVGGKGAKGDRGLPGPRGPQGALGQPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGTPGERGEPGPPGPEGGRGDFGMKGRPGRKGEKGEPADPGPHGEPGPRGPRGDPGPEGEPGPPGDPGLTECDVMTYVRETCGCCDCEKRCGALDVVFVIDSSESIGYTNFTLEKNFVINVVNRLGAIAKDPKSETGTRVGVVQYSHEGTFEAIQLDDERIDSLSSFKEAVKNLEWIAGGTWTPSALKFAYNQLIKESRRQKTRVFAVVITDGRHDPRDDDLNLRALCDRDVTVTAIGIGDMFHERHESENLYSIACDKPQQVRNMTLFSDLVAEKFIDDMEDVLCPDPQIVCPELPCQTELYVAQCTQRPVDIVFLLDGSERLGEQNFHKVRRFVEEVAQRLTLARRDDDPLNARLALLQFGGPQEQQLAFPLTANLTVIREALEDARYLNSFSHVGTGVVHAINHVVRGARAGARRHAELSFVFLTDGVTGNESLQEAVHSMRKQNVVPTVVAVGGDVDEHVLAEISLGDRAAIFREKDFDSLAQPRFFDRFIRWIC