Details from NCBI annotation

Gene Symbol Rrp1
Gene Name ribosomal RNA processing 1 homolog (S. cerevisiae), transcript variant X1
Entrez Gene ID 101698573

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RRP1 ENSCPOG00000021683 (Guinea pig)

Gene Details

ribosomal RNA processing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018159, Guinea pig)

Protein Percentage 80.89%
CDS Percentage 84.3%
Ka/Ks Ratio 0.16462 (Ka = 0.1036, Ks = 0.6292)

RRP1 ENSG00000160214 (Human)

Gene Details

ribosomal RNA processing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000417464, Human)

Protein Percentage 66.82%
CDS Percentage 73.32%
Ka/Ks Ratio 0.186 (Ka = 0.2248, Ks = 1.2084)

Rrp1 ENSMUSG00000061032 (Mouse)

Gene Details

ribosomal RNA processing 1 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000058785, Mouse)

Protein Percentage 69.1%
CDS Percentage 73.82%
Ka/Ks Ratio 0.15403 (Ka = 0.2044, Ks = 1.3271)

Rrp1 ENSRNOG00000001203 (Rat)

Gene Details

ribosomal RNA processing 1 (Rrp1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001597, Rat)

Protein Percentage 69.41%
CDS Percentage 73.65%
Ka/Ks Ratio 0.13303 (Ka = 0.2092, Ks = 1.5724)

Genome Location

Sequence Coding sequence

Length: 1716 bp    Location: 30138894..30127513   Strand: -
>XM_004842497.1
ATGCTCTGCGAGCGCCGGCTCCACGCTGCCCTTCGGGGCGGTCGCAGCCAAGGGGCTCCCTCTGGCGAGAAGGGCTCACGCTACCCTGCCCCCTCGCCGTCGTGGACGTCGCAAGAGGTGCTCTCGGGTCGCCTCGCCACCCACCTTCCCCGCAGGCGCCAGTTGCGCAGCCAGGCCATTGCGCGGCGGTGGCGAGCGACCCTGCGGCGCCTCGGGCCCGTGACGTACGGGCGGCGTCGCAGGAGCGTGACGTGGCCTGGAGACGTCGCGGGCTGTGACGTAGGACCGGATGACGTCAAGCGCGCGCCGCCGCTTAGCTCACGTGCGGAGTTGGCGAGAGAGACCATGGCTCCAGGCGTGCAGCTGCCCCCGGAGATCCAGCTGGCTCAGCGCCTGGCGGGCAACGAGCAGGTGACCCGGGACCGGGCGGTGCGGAAGCTCCGGAAGTACATTGTCGCCAGGACCCAGCGGGCCACAGGGGGCTTCACGCATGAGGAGCTGCTGAAGATATGGAAAGGACTGTTTTACTGCATGTGGATGCAGGACAAGCTGCTCCTGCAGGAGGAACTGGCAAGGACCATTTCCCAGCTCATCCATGCTTTTCAGACCACGGAGGCACAGCACCTGTTCCTGCAAACGTTCTGGCAGACCATGACCCGCGAGTGGGCGGGCATTGACCGGCTGCGCTTGGACAAGTTCTACCTGCTCATGCGCATGGTCCTGAACGAGGCCCTGAAGGCAGTGAGGATTCGAGGCTGGGCAGAGAGGGACATCGAGCAGCTTCTGGAGCTGCTGACAACCGAGATCTTGCACGAGGACAGCCAGGCTCCCAACGGTGTGAAGAGCCACTTCCTCGAGGTCTACCTGGAGGAGCTGGCCAAAGTGGGCGCCGCAGAGCTCACTGCTGACCAGAACCTGCGGTTCGTGGAGCCCTTCTGCTGGATCGCCGCCCTCACCAAGGACTCCCTGGTTCTGCACAACATCACTCGGGGCATCTTCGAGACCATTGTGGAACAGGCCCCCTTTGCCATCGAGGACCTCATGAGGGAACTGGATGAGGAGGAAGGGGAGGAGGAGGCGTCAGGTGGCGATGACGACTCAGACAGTGACGAGGAGCTGCCTGGCCAGAGGCCACCTGCAGGCTCCCCGGAGCAGAAGTGGGATGACGAGGACAGCACCAGCCCTGTCCTCCAGTTTGACTACAAGGCGGTTGCCGACAGGCTGTTTGAGGCAGCCAGCCAGCAGAACACCCCTTCTCAGAACAGGAAGCGCCTCTACAAGGTTGTCCGCAAGTTGCAGGACCTCGCTGGAGGGCACTTCCCTGAGGACGAAGTCCCGGAGAGGGCCTGCAAGCGTCTGCTGGAGGGGAGGCGCGTGCGGAAAGGGAAGCGGCGCTGGCTGCAGCAGCAGGCACGGAGCCTGAGAGGGGAACCTGGAGTGGAGGCCGAGGCCCTGAGCCCAGGAGGTGAGATGAAGAAGAGCCGGGGGAGGCCCAGGAGCACCGACCCTGCGCCGCGCACAGGAGCTGCTGGCCGGAAGGGGCCGCCCGGGAGAAAGAGGCGACCTGGGCAGCGGCATGGCGCCCGAGCAAAGGCGAAGGCGGCTGGGACGCGGGAGTCAGCGAGGAAGAAGCAGCGGCCGCTGGAGAGCGGGCAGTGGCGTGGCCGGCGGGGACGGGTGGGGGCTGTGCGATCCTCCAGCGCCGAGCCGACCTGA

Related Sequences

XP_004842554.1 Protein

Rrp1 PREDICTED: ribosomal RNA processing protein 1 homolog A isoform X1 [Heterocephalus glaber]

Length: 571 aa      View alignments
>XP_004842554.1
MLCERRLHAALRGGRSQGAPSGEKGSRYPAPSPSWTSQEVLSGRLATHLPRRRQLRSQAIARRWRATLRRLGPVTYGRRRRSVTWPGDVAGCDVGPDDVKRAPPLSSRAELARETMAPGVQLPPEIQLAQRLAGNEQVTRDRAVRKLRKYIVARTQRATGGFTHEELLKIWKGLFYCMWMQDKLLLQEELARTISQLIHAFQTTEAQHLFLQTFWQTMTREWAGIDRLRLDKFYLLMRMVLNEALKAVRIRGWAERDIEQLLELLTTEILHEDSQAPNGVKSHFLEVYLEELAKVGAAELTADQNLRFVEPFCWIAALTKDSLVLHNITRGIFETIVEQAPFAIEDLMRELDEEEGEEEASGGDDDSDSDEELPGQRPPAGSPEQKWDDEDSTSPVLQFDYKAVADRLFEAASQQNTPSQNRKRLYKVVRKLQDLAGGHFPEDEVPERACKRLLEGRRVRKGKRRWLQQQARSLRGEPGVEAEALSPGGEMKKSRGRPRSTDPAPRTGAAGRKGPPGRKRRPGQRHGARAKAKAAGTRESARKKQRPLESGQWRGRRGRVGAVRSSSAEPT