Sequence details NCBI ID: XM_004842485.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pfkl
Gene Name phosphofructokinase, liver, transcript variant X2
Entrez Gene ID 101724978

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PFKL ENSCPOG00000019438 (Guinea pig)

Gene Details

phosphofructokinase, liver

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020281, Guinea pig)

Protein Percentage 97.08%
CDS Percentage 92.25%
Ka/Ks Ratio 0.01833 (Ka = 0.0125, Ks = 0.6807)

PFKL ENSG00000141959 (Human)

Gene Details

phosphofructokinase, liver

External Links

Gene Match (Ensembl Protein ID: ENSP00000269848, Human)

Protein Percentage 93.59%
CDS Percentage 89.4%
Ka/Ks Ratio 0.02895 (Ka = 0.0279, Ks = 0.9638)

Pfkl ENSMUSG00000020277 (Mouse)

Gene Details

phosphofructokinase, liver, B-type

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020522, Mouse)

Protein Percentage 94.49%
CDS Percentage 87.26%
Ka/Ks Ratio 0.02093 (Ka = 0.0245, Ks = 1.1702)

Pfkl ENSRNOG00000001214 (Rat)

Gene Details

phosphofructokinase, liver (Pfkl), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001625, Rat)

Protein Percentage 94.87%
CDS Percentage 87.99%
Ka/Ks Ratio 0.01869 (Ka = 0.0223, Ks = 1.1907)

Genome Location

Sequence Coding sequence

Length: 2343 bp    Location: 29842848..29826202   Strand: -
Raw sequence   
>XM_004842485.1
ATGGCCGCTGTGGACCTGGAGAAGCTGCGCGCGTCGGGGGCCGGCAAGGCCATCGGGGTGCTGACCAGCGGCGGCGACGCGCAAGGTATGAATGCTGCCGTGAGGGCTGTGACCCGCATGGGCATCTACGTGGGTGCCAAGGTGTTTCTCATCTATGAGGGCTACGAGGGCCTCGTGGAGGGAGGTGAGAACATCAAGCCGGCCACCTGGCTCAGCGTCTCCAACATCATCCAGCTGGGTGGCACTGTCATCGGCAGCGCCCGCTGCAAGGCCTTCACCACACGGGAGGGGCGCCGGGCGGCCGCCTTCAACCTGGTGCAGCGTGGCATCACCAACCTGTGTGTCATCGGCGGGGACGGCAGCCTCACGGGCGCCAACATCTTCCGGAGCGAGTGGGGCAGCCTGCTGGAGGAGCTGGTGAGGGAAGGCAGGATCTCGGAGACCGCGGCTCAGACCTACTCACACCTGAATATCGCGGGGCTGGTGGGCTCCATCGATAACGACTTCTGCGGCACCGACATGACCATCGGCACGGACTCGGCCCTGCACCGCATCATGGAGGTCATAGACGCCATCACCACCACGGCCCAGAGCCACCAGAGGACGTTCGTGCTGGAGGTGATGGGGCGGCACTGCGGGTACCTGGCGCTGGTGTCCGCCCTGGCCTCAGGCGCCGACTGGCTATTCATCCCCGAGGCGCCCCCCGAGGACGGCTGGGAGAACTTCATGTGCGAGAGGCTGGGGGAGACTCGCAGCCGGGGGTCCCGCCTGAACATCATCATCCTGGCCGAGGGTGCCATCGACCGGAACGGCAAGCCCATCTCGTCCAGCTATGTGAAGGATCTGGTGGTCCAGAGGCTGGGCTTTGACACTCGAGTGACGGTGCTGGGCCACGTGCAGCGAGGAGGGACGCCCTCGGCCTTCGACCGCGTCCTGAGCAGCAAGATGGGCATGGAGGCAGTGATGGCGCTGCTGGAGGCCACGCCTGACACGCCGGCCTGCGTGGTCAGCCTCTCGGGGAACCAGTCCGTGCGGCTGCCCCTCCTGGAGTGTGTGCAGGTGACAAAGGACGTGCAGAAGGCCATGGACGACAAGAGGTTCGACGAAGCCATCCAGCTGCGTGGCAGGAGCTTCGAGAACAACTGGAACATTTACAAGCTCCTCGCCCACCAGAAGGTTTCCAAGGAGAAGACCAACTTCTCCCTGGCCATCCTGAACGTGGGCGCCCCAGCAGCTGGCATGAATGCAGCTGTGCGCTCGGCTGTGCGGACCGGCATCTCCCAGGGCCACACGGTGTATGTCGTGCACGATGGCTTCGAGGGCCTGGCCAAGGGCCAGGTGCAGGAAGTGGGTTGGCATGACGTGGCCGGCTGGCTAGGGCGTGGTGGCTCCATGCTGGGCACCAAGAGGACCCTGCCCAAGGCCCACATGGAGGCCATCGTGGAGAATCTCCGCACGCACAACATCCACGCCTTGCTGGTCATCGGCGGGTTCGAGGCCTATGAGGGGGTGTTGCAGCTGGTGGAGGCACGTGGGCGCTACGAGGAGCTGTGCATCGTCATGTGCGTCATCCCCGCCACCATCAGCAACAACGTGCCGGGCACGGACTTCAGCCTGGGCTCGGACACGGCCGTCAACGCTGCCATGGAGAGCTGCGACCGCATCAAGCAGTCGGCCTCGGGGACCAAGCGCCGTGTGTTCATCGTGGAGACCATGGGTGGATGCTGCGGCTACCTGGCCACGGTGGCCGGCATCGCCGTGGGTGCTGACGCTGCCTATGTCTTCGAGGACCCTTTCAACATCCACGACCTGCAGGCCAACGTGGAGCACATGACGGAGAAGATGAAGACTGACATCCAGAGGGGCCTGGTGCTGCGGAACGAGAAGTGCCATGAGCACTACACCACGGAGTTCCTGTACAACCTCTACTCGTCGGAGGGCAAGGGTGTCTTCGACTGCCGGACCAACGTGCTGGGCCACTTGCAGCAGGGCGGGGCTCCCACACCCTTTGACCGGAACTACGGGACCAAGCTGGGGGTGAAGGCCTTGCTCTGGATGTCGGACAAGCTGCGGGCTGTCTACCGCAGGGGGCGGGTGTTCGCCAACGCCCCAGACTCAGCCTGCGTGATTGGCCTGCGGAAGAAGGTGGTGGCCTTCAGCCCTGTCACGGAGCTCAAGGAGGACACAGACTTTGAGCACCGCATGCCCCGGGAGCAGTGGTGGCTGAACCTGCGGCTGATGCTGAAGATGCTGGCACACTACCACATCAGCATGGCCGACTACGTGTCGGGGGAGCTGGAGCACGTCACGCGGCGCACGCTCAGCCTGGACACGGGCTTCTGA

Related Sequences

XP_004842542.1 Protein

Pfkl PREDICTED: 6-phosphofructokinase, liver type isoform X2 [Heterocephalus glaber]

Length: 780 aa      View alignments
>XP_004842542.1
MAAVDLEKLRASGAGKAIGVLTSGGDAQGMNAAVRAVTRMGIYVGAKVFLIYEGYEGLVEGGENIKPATWLSVSNIIQLGGTVIGSARCKAFTTREGRRAAAFNLVQRGITNLCVIGGDGSLTGANIFRSEWGSLLEELVREGRISETAAQTYSHLNIAGLVGSIDNDFCGTDMTIGTDSALHRIMEVIDAITTTAQSHQRTFVLEVMGRHCGYLALVSALASGADWLFIPEAPPEDGWENFMCERLGETRSRGSRLNIIILAEGAIDRNGKPISSSYVKDLVVQRLGFDTRVTVLGHVQRGGTPSAFDRVLSSKMGMEAVMALLEATPDTPACVVSLSGNQSVRLPLLECVQVTKDVQKAMDDKRFDEAIQLRGRSFENNWNIYKLLAHQKVSKEKTNFSLAILNVGAPAAGMNAAVRSAVRTGISQGHTVYVVHDGFEGLAKGQVQEVGWHDVAGWLGRGGSMLGTKRTLPKAHMEAIVENLRTHNIHALLVIGGFEAYEGVLQLVEARGRYEELCIVMCVIPATISNNVPGTDFSLGSDTAVNAAMESCDRIKQSASGTKRRVFIVETMGGCCGYLATVAGIAVGADAAYVFEDPFNIHDLQANVEHMTEKMKTDIQRGLVLRNEKCHEHYTTEFLYNLYSSEGKGVFDCRTNVLGHLQQGGAPTPFDRNYGTKLGVKALLWMSDKLRAVYRRGRVFANAPDSACVIGLRKKVVAFSPVTELKEDTDFEHRMPREQWWLNLRLMLKMLAHYHISMADYVSGELEHVTRRTLSLDTGF