Sequence details NCBI ID: XM_004842479.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Lrrc3
Gene Name leucine rich repeat containing 3
Entrez Gene ID 101722737

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRRC3 ENSCPOG00000000316 (Guinea pig)

Gene Details

leucine rich repeat containing 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000021198, Guinea pig)

Protein Percentage 87.16%
CDS Percentage 89.36%
Ka/Ks Ratio 0.09088 (Ka = 0.0584, Ks = 0.6428)

LRRC3 ENSG00000160233 (Human)

Gene Details

leucine rich repeat containing 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000291592, Human)

Protein Percentage 76.26%
CDS Percentage 82.88%
Ka/Ks Ratio 0.07535 (Ka = 0.1179, Ks = 1.5648)

Lrrc3 ENSMUSG00000051652 (Mouse)

Gene Details

leucine rich repeat containing 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000059570, Mouse)

Protein Percentage 81.71%
CDS Percentage 80.93%
Ka/Ks Ratio 0.0443 (Ka = 0.094, Ks = 2.1222)

Lrrc3 ENSRNOG00000001217 (Rat)

Gene Details

leucine rich repeat containing 3 (Lrrc3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001632, Rat)

Protein Percentage 81.71%
CDS Percentage 79.64%
Ka/Ks Ratio 0.03484 (Ka = 0.0927, Ks = 2.6618)

Genome Location

Sequence Coding sequence

Length: 774 bp    Location: 29751019..29749305   Strand: -
Raw sequence   
>XM_004842479.1
ATGGGCTCCGGGCGCAGGCAGAGCCCCGGGTCCCCGCCGGCCCCCGCCCGGGGCGCCTGCCTCTTCCTCCTGCTCTGCCTGCGCCTGGGCGCCCCCTGTCCGCAGGCCTGCGAGTGCTCTGACCAGGCAGGGGCTGTGGCCGTGCACTGCAGCCACAGTGACCTGCAGGAGGTCCCTGCGGACATTCCCGCCGACGCGGAGCTCCTGAAGCTGGACGCCAACAGGATCTCCCGCATCCCGGACGGCGCCTTCCAGCACCTGCAGCACCTGCGCGAGCTGGACCTGTCCCACAACGCCGTGGAGACCATCGGCCCCGCTGCCTTTTCCGGCCTGGCCGGGGGCCTGCGGCTGCTGGACCTGTCCCACAACCGCATCCGCAGGATCCCCAAGGACGCCCTGGGCAAGCTGAGTGCCAAGATCCGCCTGTCCCACAACCCGCTGCACTGCGAGTGTGCCCTGCAGGAGGCGCTCTGGGAGCTGAAGCTGGACCCCGACTCGGTGGACGAGTTGGCCTGTCACACCTCCGTGCAGGAGGAGTTCGTGGGCCAGCCGCTCATCCAGGTGCTGGACTCTGGCGTCAGCCTCTGCAGCGCCCACCACAAGACCACGGATGTGGCCATGCTGGTCACCATGTTCGGCTGGTTCACCATGGTCGTCACCTACATCGTTTACTACGTGCGGCACAACCAGGAGGATGCCCGGAGGCACCTGGAGTACCTGAAGTCCCTGCCCAGCGCCCCCAGTCCCAAGGACCTCGGCAGCCCTGTACACTAG

Related Sequences

XP_004842536.1 Protein

Lrrc3 PREDICTED: leucine-rich repeat-containing protein 3 [Heterocephalus glaber]

Length: 257 aa      View alignments
>XP_004842536.1
MGSGRRQSPGSPPAPARGACLFLLLCLRLGAPCPQACECSDQAGAVAVHCSHSDLQEVPADIPADAELLKLDANRISRIPDGAFQHLQHLRELDLSHNAVETIGPAAFSGLAGGLRLLDLSHNRIRRIPKDALGKLSAKIRLSHNPLHCECALQEALWELKLDPDSVDELACHTSVQEEFVGQPLIQVLDSGVSLCSAHHKTTDVAMLVTMFGWFTMVVTYIVYYVRHNQEDARRHLEYLKSLPSAPSPKDLGSPVH