Details from NCBI annotation

Gene Symbol Pknox1
Gene Name PBX/knotted 1 homeobox 1, transcript variant X3
Entrez Gene ID 101705108

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PKNOX1 ENSCPOG00000004883 (Guinea pig)

Gene Details

PBX/knotted 1 homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004395, Guinea pig)

Protein Percentage 96.33%
CDS Percentage 90.83%
Ka/Ks Ratio 0.0371 (Ka = 0.0169, Ks = 0.4566)

PKNOX1 ENSG00000160199 (Human)

Gene Details

PBX/knotted 1 homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000291547, Human)

Protein Percentage 96.1%
CDS Percentage 87.39%
Ka/Ks Ratio 0.02927 (Ka = 0.0194, Ks = 0.6617)

Pknox1 ENSMUSG00000006705 (Mouse)

Gene Details

Pbx/knotted 1 homeobox

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000094966, Mouse)

Protein Percentage 95.87%
CDS Percentage 87.23%
Ka/Ks Ratio 0.02759 (Ka = 0.02, Ks = 0.7253)

Pknox1 ENSRNOG00000001184 (Rat)

Gene Details

PBX/knotted 1 homeobox 1 (Pknox1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001566, Rat)

Protein Percentage 95.64%
CDS Percentage 86.85%
Ka/Ks Ratio 0.02688 (Ka = 0.0209, Ks = 0.7788)

Genome Location

Sequence Coding sequence

Length: 1311 bp    Location: 27733833..27696262   Strand: -
>XM_004842427.1
ATGATGGCCACACAGACCCTGAGTATAGACAGCTATCAAGACGGGCAGCAAATGCAAGTGGTAACAGAGTTAAAAACGGAGCAAGAGCCAATCTGCTCTGAACCGGATGCGGAAGGAGTGAGCCCTCCTCCCGTGGAGTCTCAGACCCCGATGGATGCGGACAAGCAGGCCATTTATAGGCATCCCCTGTTTCCATTATTAGCTTTGTTGTTTGAAAAATGTGAACAGTCCACGCAAGGCTCTGAAGGCACGACTTCTGCCAGTTTTGATGTGGACATCGAGAACTTTGTCAGGAAGCAAGAGAAAGAAGGAAAACCCTTCTTCTGTGAAGATCCAGAAACTGACAACTTAATGGTAAAAGCCATCCAGGTGTTACGCATTCATCTTCTTGAGCTGGAGAAAGTGAATGAACTCTGCAAAGATTTCTGCAGTCGGTACATTGCATGTCTGAAGACAAAAATGAACAGTGAGACCCTGCTGAGCGGAGAGCCCGGAAGCCCGTACTCCCCCGTGCAGTCCCAGCAGATTCAGAGCGCAATCACGGGCACCCTTAGCCCGCAAGGGATCGTGGTGCCGGCATCTGCCCTGCAGCAGGGAAATGTCACCATGGCGACAGTGGCAGGTGGCACCGTGTACCAGCCTGTCACAGTGGTCACTCCTCAAGGCCAAGTGGTCACCCAGGCATTATCTCCGGGGACGATCAGGATCCAGAACTCGCAGCTCCAGCTGCAATTGAATCAGGACCTCAGCCTCCTGCACCAGGATGACGGCTCATCCAAGAACAAGAGGGGCGTCCTGCCCAAGCACGCCACCAATGTCATGCGGTCCTGGCTCTTCCAGCACATAGGGCATCCTTACCCAACAGAGGACGAGAAAAAGCAGATCGCTGCTCAGACAAACTTGACACTGCTCCAAGTCAACAACTGGTTCATCAATGCTAGAAGACGAATTCTGCAGCCCATGTTGGACTCCAGTTGTTCAGAGACCCCGAAGACGAAGAAGAAAACGGGTCAGAACCGGCCGGTGCAGAGGTTTTGGCCAGACTCCATCGTGTCGGGTGTGGCCCAGGCTCCGCCCAGCGAGCTCGCCATGTCGGAAGGTGCCGTCGTGACCATCACCGCGCCCGTGAACATGAATGTGGACAGCCTGCAGTCCCTGTCCTCGGACGGGGCCACCCTGGCCGTGCAGCAGGTCATGATGGCGGGCCAGAGCGAGGACGAGTCCGTGGACAGCGGGGAGGAGGACGGGGCCGCGCTGGCGCCCACCCACATCGGCGGGCTGGTGCTAGAGAACAGCGACTCCCTGCAGTAG

Related Sequences

XP_004842484.1 Protein

Pknox1 PREDICTED: homeobox protein PKNOX1 isoform X3 [Heterocephalus glaber]

Length: 436 aa      View alignments
>XP_004842484.1
MMATQTLSIDSYQDGQQMQVVTELKTEQEPICSEPDAEGVSPPPVESQTPMDADKQAIYRHPLFPLLALLFEKCEQSTQGSEGTTSASFDVDIENFVRKQEKEGKPFFCEDPETDNLMVKAIQVLRIHLLELEKVNELCKDFCSRYIACLKTKMNSETLLSGEPGSPYSPVQSQQIQSAITGTLSPQGIVVPASALQQGNVTMATVAGGTVYQPVTVVTPQGQVVTQALSPGTIRIQNSQLQLQLNQDLSLLHQDDGSSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQPMLDSSCSETPKTKKKTGQNRPVQRFWPDSIVSGVAQAPPSELAMSEGAVVTITAPVNMNVDSLQSLSSDGATLAVQQVMMAGQSEDESVDSGEEDGAALAPTHIGGLVLENSDSLQ