Details from NCBI annotation

Gene Symbol Cbs
Gene Name cystathionine-beta-synthase, transcript variant X5
Entrez Gene ID 101703797

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CBS ENSCPOG00000007817 (Guinea pig)

Gene Details

cystathionine-beta-synthase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007040, Guinea pig)

Protein Percentage 90.23%
CDS Percentage 89.85%
Ka/Ks Ratio 0.08203 (Ka = 0.0452, Ks = 0.5505)

CBS ENSG00000160200 (Human)

Gene Details

cystathionine-beta-synthase

External Links

Gene Match (Ensembl Protein ID: ENSP00000381231, Human)

Protein Percentage 85.9%
CDS Percentage 86.22%
Ka/Ks Ratio 0.06952 (Ka = 0.067, Ks = 0.9638)

Cbs ENSMUSG00000024039 (Mouse)

Gene Details

cystathionine beta-synthase

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000066878, Mouse)

Protein Percentage 86.97%
CDS Percentage 83.12%
Ka/Ks Ratio 0.06396 (Ka = 0.0732, Ks = 1.1445)

Cbs ENSRNOG00000029528 (Rat)

Gene Details

cystathionine beta synthase (Cbs), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000039968, Rat)

Protein Percentage 86.79%
CDS Percentage 83.24%
Ka/Ks Ratio 0.05535 (Ka = 0.0698, Ks = 1.2609)

Genome Location

Sequence Coding sequence

Length: 1641 bp    Location: 27672960..27687573   Strand: +
>XM_004842424.1
ATGCCTTCGGAGACACCCCAGGAGGAAAGTGGGGCTTCGGGATGCCCGCACCTCTCCAAGGAGCGCCTGTGGATCCCGCCGGATGCCCCGAGCAGGTGCACCTGGCACCTGGGCAGGCCTGGCACCGACTCCCCGCATCACCACACCGGCCTGGCAGAATCTCCAAAAATTTTGCCAGATATTCTGAGCAACATCGGGAACACCCCAATGGTCAGAATCAACAAGATCGGGAAGAATGCGGGCCTCAAGTGCGAGCTCTTGGCCAAGTGTGAGTTCTTCAACGCGGGCGGGAGCGTGAAGGACCGCATCAGCCTGCGGATGGTGGAGGATGCCGAGCGGGACGGGACCCTGAAGCCCGGGGACACCATCATCGAGCCGACGTCCGGGAACACAGGGATCGGGCTGGCGCTGGCCGCGGCCGTGAAGGGCTATCGCTGCATCATCGTGATGCCGGAGAAGATGAGCTTGGAGAAGGTGGACGTGCTGCGGGCCCTGGGCGCCGAGATCGTGCGGACCCCCACCAACGCCAGGTTCGACTCCCCCGAGTCGCACGTGGGGGTGGCTTGGCGGCTGAAGAACGAGATCCCCAACTCTCACATACTGGATCAGTACCGCAATGCCAGCAACCCCCTGATGCACTACGACACCACGGCTGAGGAGATCTTGCAGCAGTGTGGGGGGAAGCTGGACATGTTGGTGGCTTCAGTGGGCACAGGTGGAACCATCACGGGCATTGCCCGGAAGCTGAAGGAGAAGTGTCCCAGGTGCAAAATCATCGGGGTGGACCCCGAGGGCTCCATTCTGGCCGAGCCTGAGGAGCTGAACCGGACTGAGCAGACAGCCTATGAGGTGGAGGGCATCGGCTATGACTTCATCCCCACAGTGCTGGACCGGGCGGTGGTGGACAAGTGGTTCAAGAGCAACGACGAGGAGGCCTTCATCTTTGCCCGCATGCTGATCGCACAGGAGGGGCTGCTGTGTGGTGGCAGTTCTGGCAGTGCCATGGCTGTGGCCGTGAAAGCCGCCCGGGAGCTGCAGGAGGGTCAGCGCTGCGTGGTCATCCTGCCCGACTCGGTGCGGAACTACATGTCCAAGTTCCTAAGTGACAAATGGATGCTGCAGAAGGGCTTCATGAAGGAGGAGGAGGTCGCGGTGAAGAGGCCCTGGTGGTGGCACCTGCAGGTCCAGGAGCTGAGCCTGTCGGCCCCGCTGACAGTGCTGCCCACCGTCACCCTCGAGCACACCATCGCCATTCTGCGTGAGAAGGGCTTCGACCAGGTGCCCGTGGTCGACGAATCGGGGGCCATCCTGGGCATGGTGACCCTCGGCAACATGCTGTCCTCTCTGCTCGCCGGGAAGGTGCGGCCGGCCGACCAGGTCTGCAGGGTCCTCTACAGGCAGTTCAAGCCGGTCCACCTGACGGACACACTGGGCATGCTGTCGCACGTCCTGGAGATAGACCACTTCGCCCTGGTGGTCCACAAGCAGATCCAGTCACGGGACCGGCCCGGGGCAGGCGTGGTGGGGGGGCCTGCAGACCACAGTGATGGTGAGCCCAATGCACGGCAGATGGTGTTCGGCGTCGTCACCGCCATCGACCTGCTCAACTTCGTGGCCAACCGTGAGCAGGACAAGAAGTGA

Related Sequences

XP_004842481.1 Protein

Cbs PREDICTED: cystathionine beta-synthase isoform X5 [Heterocephalus glaber]

Length: 546 aa      View alignments
>XP_004842481.1
MPSETPQEESGASGCPHLSKERLWIPPDAPSRCTWHLGRPGTDSPHHHTGLAESPKILPDILSNIGNTPMVRINKIGKNAGLKCELLAKCEFFNAGGSVKDRISLRMVEDAERDGTLKPGDTIIEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSLEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLMHYDTTAEEILQQCGGKLDMLVASVGTGGTITGIARKLKEKCPRCKIIGVDPEGSILAEPEELNRTEQTAYEVEGIGYDFIPTVLDRAVVDKWFKSNDEEAFIFARMLIAQEGLLCGGSSGSAMAVAVKAARELQEGQRCVVILPDSVRNYMSKFLSDKWMLQKGFMKEEEVAVKRPWWWHLQVQELSLSAPLTVLPTVTLEHTIAILREKGFDQVPVVDESGAILGMVTLGNMLSSLLAGKVRPADQVCRVLYRQFKPVHLTDTLGMLSHVLEIDHFALVVHKQIQSRDRPGAGVVGGPADHSDGEPNARQMVFGVVTAIDLLNFVANREQDKK