Details from NCBI annotation

Gene Symbol U2af1
Gene Name U2 small nuclear RNA auxiliary factor 1, transcript variant X4
Entrez Gene ID 101702719

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

U2AF1 ENSCPOG00000004893 (Guinea pig)

Gene Details

U2 small nuclear RNA auxiliary factor 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004405, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 94.27%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.3024)

U2AF1 ENSG00000160201 (Human)

Gene Details

U2 small nuclear RNA auxiliary factor 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000291552, Human)

Protein Percentage 100.0%
CDS Percentage 91.35%
Ka/Ks Ratio 0.001 (Ka = 0.0005, Ks = 0.4809)

U2af1 ENSMUSG00000061613 (Mouse)

Gene Details

U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000014684, Mouse)

Protein Percentage 100.0%
CDS Percentage 89.78%
Ka/Ks Ratio 0.001 (Ka = 0.0006, Ks = 0.6242)

U2af1 ENSRNOG00000045860 (Rat)

Gene Details

U2 small nuclear RNA auxiliary factor 1 (U2af1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000067005, Rat)

Protein Percentage 100.0%
CDS Percentage 89.08%
Ka/Ks Ratio 0.001 (Ka = 0.0007, Ks = 0.715)

Genome Location

Sequence Coding sequence

Length: 738 bp    Location: 27647723..27660602   Strand: +
>XM_004842419.1
ATGGCGGAGTATTTGGCCTCCATCTTCGGCACCGAAAAAGACAAAGTCAACTGCTCATTTTATTTCAAAATTGGAGCATGTCGTCATGGAGACAGGTGCTCTCGGTTGCACAATAAACCGACCTTTAGCCAGACCATTGCCCTCTTGAACATTTACCGTAACCCTCAAAACTCTTCCCAGTCTGCTGACGGTTTGCGTGCCGTGAGCGATGTGGAGATGCAGGAGCACTACGATGAGTTCTTTGAGGAGGTCTTCACGGAGATGGAGGAGAAGTATGGGGAAGTGGAGGAGATGAACGTCTGCGACAACCTGGGAGACCACCTTGTGGGGAACGTGTACGTCAAGTTTCGCCGTGAGGAGGATGCGGAGAAGGCTGTGATCGACCTGAATAACCGCTGGTTTAATGGACAGCCGATCCATGCCGAGCTCTCGCCCGTGACCGACTTCAGGGAAGCCTGCTGCCGTCAGTATGAGATGGGGGAGTGCACTCGAGGAGGCTTCTGCAACTTCATGCACCTGAAGCCGATCTCCAGAGAGCTGCGACGAGAGCTGTACGGGCGCCGTCGAAAGAAGCATCGGTCCCGGTCCCGGTCCCGGGAGCGGCGCTCTCGGTCTAGAGACCGCGGTCGTGGCGGAGGCGGTGGCGGCGGAGGTGGCGGCGGTGGCGGTGGCGGCGGCGGGGGACGGGAGCGCGACCGGAGGCGGTCAAGAGATCGGGAGAGGTCTGGCCGGTTCTGA

Related Sequences

XP_004842476.1 Protein

U2af1 PREDICTED: splicing factor U2AF 35 kDa subunit isoform X4 [Heterocephalus glaber]

Length: 245 aa      View alignments
>XP_004842476.1
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGGGGGGGGGGGRERDRRRSRDRERSGRF