Details from NCBI annotation

Gene Symbol Rrp1b
Gene Name ribosomal RNA processing 1 homolog B (S. cerevisiae), transcript variant X1
Entrez Gene ID 101698323

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RRP1B ENSCPOG00000002396 (Guinea pig)

Gene Details

ribosomal RNA processing 1B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002179, Guinea pig)

Protein Percentage 72.43%
CDS Percentage 79.61%
Ka/Ks Ratio 0.38473 (Ka = 0.1878, Ks = 0.4881)

RRP1B ENSG00000160208 (Human)

Gene Details

ribosomal RNA processing 1B

External Links

Gene Match (Ensembl Protein ID: ENSP00000339145, Human)

Protein Percentage 67.45%
CDS Percentage 75.09%
Ka/Ks Ratio 0.27945 (Ka = 0.2171, Ks = 0.7768)

Rrp1b ENSMUSG00000058392 (Mouse)

Gene Details

ribosomal RNA processing 1 homolog B (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000080085, Mouse)

Protein Percentage 62.86%
CDS Percentage 71.81%
Ka/Ks Ratio 0.31683 (Ka = 0.2705, Ks = 0.8538)

Rrp1b ENSRNOG00000001194 (Rat)

Gene Details

ribosomal RNA processing 1 homolog B (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001583, Rat)

Protein Percentage 63.62%
CDS Percentage 71.75%
Ka/Ks Ratio 0.28131 (Ka = 0.2574, Ks = 0.9151)

Genome Location

Sequence Coding sequence

Length: 2190 bp    Location: 27387258..27365076   Strand: -
>XM_004842403.1
ATGCAGCCTGCCGAGATCCAGTTCGCTCAGCGGCTGGCGTCCAGCGAGAAAGGCGTCCGCGACCGGGCGGTGAGGAAGCTGCGCCAGTACCTGAGCGTGAAGACGCAGAGGGAGACAGGAGGTTTCAGTCAAGAAGAACTCCTAAAAATCTGGAAAGGACTCTTCTACTGCCTGTGGGTGCAGGACGAACCCCTACTGCAGGAGGAGCTGGCAAACACTATTTCCCAACTCATCCACGTTGTTAACAACTCGGAAGCCCAGTACCTGTTCATTCGGACCTTTTGGCAAACCATGAATCGAGAATGGAAGGAGATAGACCAGCTGCACCTGGACAAATACTATATGCTGATCCGCCTGGTCCTGCGGCAGTCCTTGGAAGTTCTGAAGCAGAACGGCTGGCAAGAAAGTCGCATCCAGCTGTTCCTAGATGTCCTGATGAAGGAGCTCCTGGGTCCCGAGAGTCAGTCTCCCAATGACATCAGGTTCCACTTCATTGACATTTACCTGGACGAGCTGTCCAGAGTCGGAGGGCAGGAGCTGTTGGCAGATCAGAACCTCCAGTTTATTGACCCGTTCTGCAGGATTGCTGCCAAGACTAAGGACCACACACTGGTGCAGACTATAGCTAGGGGTGTTTTTGAAGTCATCGCAGATCAGTCTTCCTTTGTACCTGAAGAGGCAGTGGAGGAACAGAATGGGGTTGACAGTGACCTCTCCAGAGAAGAAACTCCGGGGAATGAGACACTGAGCAAAAAAGCAGTGAGAAAGAAGGCAGTGCTGGGCAAATGCCATTCCAGGAGAGTTGGGATCAGTGGTGACAGAGAAAGACATGACTGTGGAACCCTCGAGGACATGGGGCAGCTTCTCCAGTTTGACTACAAGGCCCTTGCCGACCGACTCCTAGAAGTAACCAGCGGGAAAAACATCCCGCCCTTCAACCGGAAGCGCCTCTGCAAGCTAATCAGGAAGTTCCAAGACCTCTCTGAAGGTGGGGCATCTGTCCTTGGTTTCTCTGAGGACGTTTCTGCTGATGAAAATGACCATGGCCTCAGCCAAGGAAGACTGAAGAGAAAAAGAAAGAAACCCTTGGAGCCAGCTGGGCCGGGGATGGAGGAAGGGAACAAAGCCAGTCTTGCTGGGGATGAGGACAGTGAAAGCAGCCTTCAGAAGAGAAAAAGGAGAAAGAGGAAGAAGAACCACGGCCAGCCCGGCCAGCCCGGCCAGCCCGGCCAGCCTGGGACCTGCGGCCCCAGTGATGCAGCCGCCTCCCTCACCCAGAGCGGAACTGGGACCCAAGAGCCTGGGGCTGCGCAGCCCGCACCCAGCACCTTGTCTGAGGGCAGCCTGGAGCGGTCCCGCTCCACCCCTGGGCGCAGTAAGAGGAAGCGGCAGAAGAAAAGGAGCCTGAGGGTGCAAGGGCAGCTCTGGGAACCCACAGTGTTGCTCCCAGAGGACAGCAGGCATCCTCCAGCCCCTGCCGCTGGAGCTTCCCCGACAGACAGAGCCCAGGTCCCTAAAAGAAAGTGGAAACTCGGGGCTCTCCCGGTCAATGGCAGTGGATTGGGCATGCTGGCTTGGCCTCAAGCACAGAAGGAAGGAAACGTTGGCCAGGCCACCCTGCCCCAGTGCAGGAGGCCTCAGCACAAGAAGGTGGAGCCAGGGGACCTTGACCTCTATCCTCTGTCCAGCCAGAAGACCTCGGTGTCCAAGAAGAGGAAGAAGATGAAGGAGGTGTCAAACTTGGTGGAGAATAATGGGGTCCTGATGTCCAGGGTCCAGCAGCTCCAGGCTGTGGAAAGCAGCAGAACTCGAGCCCCATTGAAGAAACCCCTGAGGCTGGAGAACGACTTCGTGAAGTTCAACACCCCCCTCCTACCAAAGCCCCTGTTCTTTAGGAAATCAAAGAGCACCTCTGCCGCCCGCCCTCCAGGTCCTGCCTTCCAGCTGAACAAAGCCCCCTCCAGTTCCAAGAAAGTCACCTTTGGGCTGAACAGGAACATGACTGCAGAGTTCAGGAAGACAGACAAGAGCATCCTGGTCAGCCCCACGGGCCCCTCCCGAGTGGCCTTCAACCCGGAGCAGAGGCCCCTCCACGGGGTGCTGAAGATGCCCGCCAGCACCATACTGGGGACCAGGACGCTGCTGCCCGCCACTCCCAAGAGGAGGCCGAAGGCCATGGACTTCTTCTGA

Related Sequences

XP_004842460.1 Protein

Rrp1b PREDICTED: ribosomal RNA processing protein 1 homolog B isoform X1 [Heterocephalus glaber]

Length: 729 aa      View alignments
>XP_004842460.1
MQPAEIQFAQRLASSEKGVRDRAVRKLRQYLSVKTQRETGGFSQEELLKIWKGLFYCLWVQDEPLLQEELANTISQLIHVVNNSEAQYLFIRTFWQTMNREWKEIDQLHLDKYYMLIRLVLRQSLEVLKQNGWQESRIQLFLDVLMKELLGPESQSPNDIRFHFIDIYLDELSRVGGQELLADQNLQFIDPFCRIAAKTKDHTLVQTIARGVFEVIADQSSFVPEEAVEEQNGVDSDLSREETPGNETLSKKAVRKKAVLGKCHSRRVGISGDRERHDCGTLEDMGQLLQFDYKALADRLLEVTSGKNIPPFNRKRLCKLIRKFQDLSEGGASVLGFSEDVSADENDHGLSQGRLKRKRKKPLEPAGPGMEEGNKASLAGDEDSESSLQKRKRRKRKKNHGQPGQPGQPGQPGTCGPSDAAASLTQSGTGTQEPGAAQPAPSTLSEGSLERSRSTPGRSKRKRQKKRSLRVQGQLWEPTVLLPEDSRHPPAPAAGASPTDRAQVPKRKWKLGALPVNGSGLGMLAWPQAQKEGNVGQATLPQCRRPQHKKVEPGDLDLYPLSSQKTSVSKKRKKMKEVSNLVENNGVLMSRVQQLQAVESSRTRAPLKKPLRLENDFVKFNTPLLPKPLFFRKSKSTSAARPPGPAFQLNKAPSSSKKVTFGLNRNMTAEFRKTDKSILVSPTGPSRVAFNPEQRPLHGVLKMPASTILGTRTLLPATPKRRPKAMDFF