Details from NCBI annotation

Gene Symbol Chaf1b
Gene Name chromatin assembly factor 1, subunit B (p60), transcript variant X3
Entrez Gene ID 101725988

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHAF1B ENSCPOG00000006333 (Guinea pig)

Gene Details

chromatin assembly factor 1, subunit B (p60)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005707, Guinea pig)

Protein Percentage 83.88%
CDS Percentage 84.84%
Ka/Ks Ratio 0.22094 (Ka = 0.0976, Ks = 0.4417)

CHAF1B ENSG00000159259 (Human)

Gene Details

chromatin assembly factor 1, subunit B (p60)

External Links

Gene Match (Ensembl Protein ID: ENSP00000315700, Human)

Protein Percentage 87.12%
CDS Percentage 84.97%
Ka/Ks Ratio 0.13797 (Ka = 0.0725, Ks = 0.5255)

Chaf1b ENSMUSG00000022945 (Mouse)

Gene Details

chromatin assembly factor 1, subunit B (p60)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023666, Mouse)

Protein Percentage 81.28%
CDS Percentage 79.86%
Ka/Ks Ratio 0.15785 (Ka = 0.1189, Ks = 0.7534)

Chaf1b ENSRNOG00000001692 (Rat)

Gene Details

chromatin assembly factor 1, subunit B (p60) (Chaf1b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002299, Rat)

Protein Percentage 81.46%
CDS Percentage 79.56%
Ka/Ks Ratio 0.14332 (Ka = 0.1155, Ks = 0.8062)

Genome Location

Sequence Coding sequence

Length: 1689 bp    Location: 27117669..27095362   Strand: -
>XM_004842397.1
ATGAAAGTCATCACGTGCGAAATAGCCTGGCACAACAAGGAGCCTGTGTACAGCCTGGACTTCCAGTACAGCATGGCCGGGAAGGTCCACAGATTGGCCTCTGCTGGGGTGGACACCGCCGTCAGGATCTGGAAGGTAGAAAAAGGACCAGATGGAAAAGCCATTGTGGAATTTTTGTCCAATCTTGCTCGTCACACCAAAGCTGTCAATGTTGTGCGTTTTTCTCCAACTGGGGAAATTTTAGCATCAGGAGGAGACGATGCCGTCATCCTGCTGTGGAAGGTGAATGACAACAAGGAGCCAGAGCAGATTGCGTTCCAGGATGAGGAGGAGGCGCAGCTGAATAAGGAGAACTGGACTGTGGTGAAAACCCTGAGGGGCCACTTAGAAGATGTGTATGACATTTGCTGGGCAACTGATGGGAATTTAATGGCATCTGCCTCTGTGGATAACACAGCCATCATATGGGATGTTAGTAAAGGACAAAAGATTTCAATTTTTAATGAACATAAAAGCTATGTACAAGGAGTAACCTGGGATCCTTTGGGTCAATACGTGGCTACACTGAGCTGCGACAGGGTGCTGCGTGTGTACAGCACACAGAAGAAACGCGTGGCTTTTAATGTTTCCAAGATGCTGTCTGGAGTGGGAGCTGAAGGAGAGGCTAGAAGTTACCGGATGTTTCATGACGACAGCATGAAGTCCTTCTTCCGGAGACTCAGTTTCACCCCCGACGGGTCCCTGCTGCTCACCCCAGCCGGATGTGTGGAGTCTGGGGAAAACGTCACCAACACCACCTACATTTTCTCCAGGAAAAACCTTAAAAGGCCAGCCGCCCATCTTCCGTGTCCCGGGAAGGCTACGCTTGCGGTTCGCTGCTGTCCGGTCTACTTTGAGTTGAGGCCGGTGGTGGAATCAGGTACGCTGGCCGGGGAGCTGGTGCGCCTGCCCTACCGCCTGGTGTTTGCGGTGGCCTCCGAGGACTCTGTGCTGCTCTATGATACTCAGCAGCCGTTCCCCTTCGGCTACGTGTCCAACATCCACTACCACACTCTCAGTGACATTTCCTGGTCCAGCGATGGGACCTTCCTGGCTATTTCGTCCACTGATGGGTACTGCTCCTTTGTGACATTTGAGAAAGATGAACTTGGCATCCCTTTGAAAGAGAAGCCCGTGTTGAACGTGAGGACCCCCGACACAGTGAAGAAAGCTAAGAATCATGCCCAGCAGGGGTCTTCCCCGGGGCCCAGACCTGCAGAGGGGACCCCCACCTCCAAAGTGGAGGACCCCAGCAGCCCCTCCGCGACCCCCTCACTGGCAGGACAGGCTCCAGCCCCAGCAGCGGTCAAGGATGCTCCTGCGACAACTCCTGGTACTAAGGGCCCCTTGCCAGGCTCTTCTGAGGAGGTGATGCTGCAGCCCAGTAGTCAGAACACGAAGGGCCACCTGTCCCGGAGGGTCACTCTGAACACGCTGCAGTCCTGGAGCAGGACCACCCCCCGGAGAATAAACTTAACACCCTTGAAGACAGAGAGTCCACCAAATTCTGTACCAGCCAGCCTAGTTTTCACCTCTTCTACTGAAGAAATTCCGTCAGAGATGCCCGGAGACCCCCTCAATAGTCCTCCAGAGCTAAAACGGCCCAGACTTGAAGAAAGCAAAGGAAGCCCCCAAAGCCTGGACTCTTGA

Related Sequences

XP_004842454.1 Protein

Chaf1b PREDICTED: chromatin assembly factor 1 subunit B isoform X3 [Heterocephalus glaber]

Length: 562 aa      View alignments
>XP_004842454.1
MKVITCEIAWHNKEPVYSLDFQYSMAGKVHRLASAGVDTAVRIWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPTGEILASGGDDAVILLWKVNDNKEPEQIAFQDEEEAQLNKENWTVVKTLRGHLEDVYDICWATDGNLMASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWDPLGQYVATLSCDRVLRVYSTQKKRVAFNVSKMLSGVGAEGEARSYRMFHDDSMKSFFRRLSFTPDGSLLLTPAGCVESGENVTNTTYIFSRKNLKRPAAHLPCPGKATLAVRCCPVYFELRPVVESGTLAGELVRLPYRLVFAVASEDSVLLYDTQQPFPFGYVSNIHYHTLSDISWSSDGTFLAISSTDGYCSFVTFEKDELGIPLKEKPVLNVRTPDTVKKAKNHAQQGSSPGPRPAEGTPTSKVEDPSSPSATPSLAGQAPAPAAVKDAPATTPGTKGPLPGSSEEVMLQPSSQNTKGHLSRRVTLNTLQSWSRTTPRRINLTPLKTESPPNSVPASLVFTSSTEEIPSEMPGDPLNSPPELKRPRLEESKGSPQSLDS