Details from NCBI annotation

Gene Symbol Hlcs
Gene Name holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)
Entrez Gene ID 101722847

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HLCS ENSCPOG00000007955 (Guinea pig)

Gene Details

holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007159, Guinea pig)

Protein Percentage 82.39%
CDS Percentage 84.85%
Ka/Ks Ratio 0.21889 (Ka = 0.1001, Ks = 0.4575)

HLCS ENSG00000159267 (Human)

Gene Details

holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)

External Links

Gene Match (Ensembl Protein ID: ENSP00000382071, Human)

Protein Percentage 76.75%
CDS Percentage 79.04%
Ka/Ks Ratio 0.19967 (Ka = 0.145, Ks = 0.7263)

Hlcs ENSMUSG00000040820 (Mouse)

Gene Details

holocarboxylase synthetase (biotin-

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000130981, Mouse)

Protein Percentage 74.23%
CDS Percentage 77.14%
Ka/Ks Ratio 0.17437 (Ka = 0.1564, Ks = 0.897)

Hlcs ENSRNOG00000001686 (Rat)

Gene Details

Protein Hlcs

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002291, Rat)

Protein Percentage 74.16%
CDS Percentage 76.36%
Ka/Ks Ratio 0.16965 (Ka = 0.1615, Ks = 0.952)

Genome Location

Sequence Coding sequence

Length: 2151 bp    Location: 26679342..26848277   Strand: +
>XM_004842388.1
ATGGAAGACAGGCTGCAGATGGAGAATGGGCTGGTGCCTCAGAAGATCGTCTCGGTGCACTTGCAGGACTCTGCTCTGCAGGAGCTTGAAGACCAGGCCTCCTCTGGCCGAGCCCCAGTCCTGCAGCCCAACGCTGAGCTCTCCCCAGAGATGGAGCCCTCAGGAGACAGGAGAGATGGGCCGGAGGCCTCTGGGGCCTGTGCCTCCAAGCCAAGCAGGGACTCCGCCGAGGACAGTGAGCCCTGTGCCCCTGCCAGGCACCGGCACCTGCACCTGTCCAGCTGCCATGAGTGTCTGGAGCTGGAGAGCAGCACCATCGAGTCTGTGAGGTTCGCGTCTGCTGAGAACATTCCTGAGCTCCCTTATGATGCCAGCAGCAGTCTGGAGGGAGCCTCTGATGAGCTCAGCCTGGAAAGGGAAGGCAGGAGAGGCAATGCCACAGGGAAGGCACCCAACATCCTCCTCTATGTGGGCTCTGGCTCCCAGGATGCCCCCGGCCTGCTGCAGCAGGTCCAGGCTCTGCTGGCCAACTGTGTGGACACCGACAGCTACCTCCTGTACCCACTGTCGGAGGACAGTGCTCGCAGGGACCCATGGCCAGACAGCTGCCTCCTGTTGGTCATCGCCGCCAGGGAGCCCATCCCCGAGGATGTGCATGGGAGGTTCACAGCCTACCTCGAGCAGGGCGGGAAGGTGCTGAGCCTGTCTTCCTCCTTCAGGCTCGGTGGCTGGCGGGTGGCCAGCAAGGCTGCGCTGCAGAGGTCCGTGCAGAACCTGGTGTTTTCCAAGGTGGGCCGGGGTGATGTGAAGCTCAGCGCTCTGAGCAGTGGCTGTGTCTACAAGGAGGCCCCTGGAGAGCCGCTCTGCCCCGGCAGGCTGCAGGGCCACCTAGAGAATGAAGACAAAGACAGGGTGATTGTGCAAGTGCCTTTTGGTGTCCATGGAGGGGAAGCCGTTCTTTGCCAGGTGCACTTAGAAGTACCTGCCAGCACCTCTGTAGTGCGAACCCAAGAAGAATTTAACTTGCTCAAATCAAGCAATATTAGACGGTATGAAGTCCTTAAGGAAATCTTGACAGCCCTCGGCCTAAGCTGTGACGCACGAGAAGCTCCCGCCTTAACACCTCTGTACTTACTGACAGCCACTGAGGAAATCCGGGATCCACTTATGCAGTGGCTTGGGAGACATGTGGATGCAGAAGGAGTAATAAAATCCAGAAAGCTCTCCCTTAAGTTTGTTTCATCGTATACACCGGAAGGGGAAATCTCCCCGTCTTCTATACCCGTGGTCACTGACACAGAGGCCTTCTCCTCAGAACATTTTAACCTAGAGCTCTATCGACAGAATCTGCAGACCAAGCACCTTGGGAAAATAATCCTGTTTGCTGAAGTGACCTCCACGACAATGAGTCTTCTGGATGGGTTGATGTTTGAGGTCCCGCAGGAAATGGGTTTAATAGCCATTGCAGTCCGGCAGACTGAGGGCAAAGGGCGGGGGCCGAATTCATGGCTGAGCCCCTTGGGATGTGCCCTTTCTACTGTGCTGGTGGCCATCCCCCTGAGGTCCCAGCTGGGACAGAGGATTCCGTTTGTCCAGCACCTGATGTCCCTGGCCATCGTGGAGGCAGTGCGGTCCATTCCTGAGTACCAGGATATCAACCTACGAGTGAAGTGGCCCAATGACATATATTACAGCGACCTCATGAAGGTTGGTGGAGTTCTGGTTAACTCGACACTTATGGGAGAAACATTTTATATACTCATCGGCTTTGGGTTTAATGTGACCAACAGTAACCCTACGATATGCATCAATGACCTCATCGAAGAATACAACAAGCAACACAGAGCAGAACTGAAGCCCTTAAGAGCTGACTGTGTCATCGCCAGGGCCGTGACGGTGCTAGAGAGACTCATCGACACGTTTCAGGATAGAGGGCCTGACGGCGTCCTCCCCCTGTATTACAGATACTGGGTCCACAGCGGCCAGCAAGTCCGTCTGGGCAGCGCCGAGGGCCAGAAGGTGTGGATTGTGGGCCTGGATGACTTGGGGTTCCTGCAGGTCCACCAGGAGGGCGGCGAGGTGGTGACCGTGCACCCCGATGGTAACTCCTTCGACATGCTGCGCAACCTCATCCTGCCCAAACGGCAGTAG

Related Sequences

XP_004842445.1 Protein

Hlcs PREDICTED: biotin--protein ligase [Heterocephalus glaber]

Length: 716 aa      View alignments
>XP_004842445.1
MEDRLQMENGLVPQKIVSVHLQDSALQELEDQASSGRAPVLQPNAELSPEMEPSGDRRDGPEASGACASKPSRDSAEDSEPCAPARHRHLHLSSCHECLELESSTIESVRFASAENIPELPYDASSSLEGASDELSLEREGRRGNATGKAPNILLYVGSGSQDAPGLLQQVQALLANCVDTDSYLLYPLSEDSARRDPWPDSCLLLVIAAREPIPEDVHGRFTAYLEQGGKVLSLSSSFRLGGWRVASKAALQRSVQNLVFSKVGRGDVKLSALSSGCVYKEAPGEPLCPGRLQGHLENEDKDRVIVQVPFGVHGGEAVLCQVHLEVPASTSVVRTQEEFNLLKSSNIRRYEVLKEILTALGLSCDAREAPALTPLYLLTATEEIRDPLMQWLGRHVDAEGVIKSRKLSLKFVSSYTPEGEISPSSIPVVTDTEAFSSEHFNLELYRQNLQTKHLGKIILFAEVTSTTMSLLDGLMFEVPQEMGLIAIAVRQTEGKGRGPNSWLSPLGCALSTVLVAIPLRSQLGQRIPFVQHLMSLAIVEAVRSIPEYQDINLRVKWPNDIYYSDLMKVGGVLVNSTLMGETFYILIGFGFNVTNSNPTICINDLIEEYNKQHRAELKPLRADCVIARAVTVLERLIDTFQDRGPDGVLPLYYRYWVHSGQQVRLGSAEGQKVWIVGLDDLGFLQVHQEGGEVVTVHPDGNSFDMLRNLILPKRQ