Sequence details NCBI ID: XM_004842387.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ttc3
Gene Name tetratricopeptide repeat domain 3
Entrez Gene ID 101722149

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TTC3 ENSG00000182670 (Human)

Gene Details

tetratricopeptide repeat domain 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000381981, Human)

Protein Percentage 73.26%
CDS Percentage 81.94%
Ka/Ks Ratio 0.38731 (Ka = 0.1607, Ks = 0.4148)

Ttc3 ENSMUSG00000040785 (Mouse)

Gene Details

tetratricopeptide repeat domain 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000112801, Mouse)

Protein Percentage 69.33%
CDS Percentage 77.23%
Ka/Ks Ratio 0.31035 (Ka = 0.1971, Ks = 0.6351)

Ttc3 ENSRNOG00000001682 (Rat)

Gene Details

E3 ubiquitin-protein ligase TTC3

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059742, Rat)

Protein Percentage 69.41%
CDS Percentage 77.63%
Ka/Ks Ratio 0.32015 (Ka = 0.1949, Ks = 0.6089)

Genome Location

Sequence Coding sequence

Length: 5886 bp    Location: 26565904..26446017   Strand: -
Raw sequence   
>XM_004842387.1
ATGGACAGTTTTACTGAGGGAGATCTCTCTATGGCGGATTATGCCTTGTTAGATGATTGCCCTGACGAGGATGAGTGTGCCTTTGCTCCAGAACTTATGACAGCGAATTATGTTCATGTGACTCAGCTTTACTGTGATGGAGTGGGTACACAGTATAAAGATTATGCCCAAACAGACAGAAATTTAGAATTTGACATCTGCAACATATGGTGTAGTAAACCAGTTTCTGACCTGCACGATTACTGTGATGCCATTAAAATATATATCTTCTGGCCACTTCTTTTTAAACATCAGCACACTTCTGTAATATCACGATTGCATCCCTGTGTGGAGCCCAGCAATTCTTGTGCTTCTGAGATAAGTTTGAGGAAATTACAGTGTCTTGAGTTGATGGAAGATATTGTGGATTTGGCAAAGAAAGTTTCGAATGATTCGTTCCTTATTGAAGGCTTATTGAAAATTGGTTATAAAATAGAAAATAAAATGTTGGCAATGGAAGAAGCTTTAAATTGGATAAAATACACAGGTGATGTAACAATTCTGCCTAAATTAGGATCAGTTGATACTAGTTGGCCTTTATTGAGAATTTTCTTTACTGAATACAAGTATCACATAACTAAAGTTGTAATGGAAAACTGCAATTTACTTGAAGAATTTAAAACTCAAAATTGTGCTCATTGTATACAGCAAGGAGAGCTCATGAAAATAAAAGGGAATGAAGAATTTTTCAATGAAAGATTTGATATAGCTATTATCTATTACACCAGAGCCATCGAATATAGACCTGACAACCACTTTCTTTATGGTAACCGAGCTCTTTGTTTTCTTCATACTGGACAGTTAAGAAATGCACTTGGTGATGGAAAGAGAGCCACTATTCTGAAGTGCTCCTGGCCAAAGGGTCATTATCGTTACTGTACTGCTCTTTCTCTGCTGGGAGAATATGACTGGGCCCTGCAAGCAAACATAAAAGCTCAAAAACTCTGTAAAAATGACCCTGAGGGAATCAAGGATCTAATTCAGCAGCATGTACAGTTACAAAAGCAAATAGAAGACCTACAAGGTCGAACACCAAATAAGAATCCAATTAAAGCTTTTTATGAAAGCAGGGCCCATATACCTAGGAATTTACCAGCACCTGCTTTTACTGCATCACTGAGCTTTGTGGAGAAGGGACGAGAGTTCCGGAAAGCTAACCAGGAAATGGCTTACGGTGGTAGTGAGAACATGAAGGAAATAGATGAGGCTTTGAGATCAGATGATTGTGACTGCCAGACTGAATTTATACAATCGCCAAGTCATCCTCCAAGACATAGAGGAAGACATAAACCCCGAAACAATGAATCGGAGAAAGTCAACTCTAATTCAGAGTTGGCTTTGCCAGTAGATTGGAGAAAGCTCTTGGAGAGAGAGTTTTCTAAATCTTCCAGAGCTGCTCAGCAGGACTTTGCTAATATTATGAAAATGCTGAGAAGCTTAATCCAAGACGGTTACACTGCCTTGCTGGACCAGCGCTGCCGCAGTGCTGCACAGTCATTTTCAGAACTGCTGAATGGCTTAGATCCTCAAAAAATAAAGCAATTGAACCTGGCTATGATTAACTATGTATTAGTAGTCTATGGACTTGCTATGTCTCTCCTTGGAATAGGACGACCTGAGGAATTATCTGAAGCTGAAAACCAGTTTAAGAGGATTCTTGAATTCTATCCCAATGAGGGACTTGACTCCTTGGCCTACTGTGGAATTGGAAAAGTATATTTGAAGAAAAACAGATTTCAAGAAGCTCTCACTCACTTTGAGAAAGCAAAAACCTTGATTTATCGTCTCCCTGGAGTATTAACTTGGCCCACAAGTAATGTGATTATTGAAGAGTCTCAGCCAGAGAAAATAAGGACAATTTTAGAGAAATTTGTTGAAGAATGCAAGTTCCCTCCAGTGCCAGATGCCATTTGTTCCTACCAGAAGTGCCTTGGGCTTTCCAAAATCCAAATATATATAACCGATCCAGACTTTAAGGGTTTTATACGAATCAGCTGTTGCCAATACTGTAAAATAGAATTTCATATGAATTGCTGGAAGAAGTTAAAAGCAACAACATTTAATGATAAAATTGACAAGGATTTTCTGCAAGGAGTTTGTCTTACCCCTGACTGTGAAGGTATCATTTCTAAGATTATCATCTTTAGCCGTGGTGGTCATGTTAAATGTGAATTTGAACACAAGGTCATTAAAGAAAAGGTTCCTCCAAGACCTATTCTGAAACAGAAATGTTCTAGCCTAGAGAAGCTAAAACTGAAAGAAGACAAAAAACTGAAGAGAAAGATCCAAAAACAAGAAGCAAAAAAACTAGCACAAGAAAGAAGGGAAGAGGACTTAAGAGAAAGTAATCCTCCAAAAAATGAACAGCAGAAAGAAACAGTAAAGAATGTTCAGAGTTGCCCGTTCCTTGATGACAGAATTCTGCAGTGCATAAAGCAGTACTCTGACAAAATTAAATCTGGTGTACTGGACACTTCCAAGCTTCTCAAAGAATTGATTTCTTGGAAGGTTTTGACCACAGAAGACTATGCAACATTTTTCTCTAACAAAAATTTTCTCACCGAAGCAGTGGACTATGTCATCGGTTACTTGGTTCAAGAAAATAATAGAGTGAAAACAAGGATGTTTCTGCACGTTTTGTGCGAGCTTCAAGAAGTGGAGCCCAAGGTAGCCAGCTGGCTCCAGAAACTTAACAGCTTTGGCTTAGATGCCACGGGAACTTTTTTTGCTCGATACGGATCACTTCTGAAGGACCTTGACTTCACCATCATGACTTTCCTGTGGAATGAGAAGTACGGTAATAAGCTCGACTCTATAGAAGGAAGGCAGCTTGAATACTTCTGTGAGCCCGTGTCCCTGAAGGAAGCACGCTGTTTGATATGGCTGCTGGAGGATCACAGAGAGAAGTTCCCGGCCCTGCACAGTGCTCTGGATGAGTTCTTCGATATAATGGATAGCCGCTGCACTGTATTAAGGAAACAAGACAATGAAGTGCCGATGACTTCTACCAAGGTGAAGAACAAAGGCAAGAAAAAGAGGCAAAAAGATACAAAGCTGATGTTAATTGGGTCTGTAACAACTTCACTAACACCAAGTAATGAGACTTCCACTTCAAGTCAAGACCCTAACAGGCGCAATGGAGACCCTACTGGCCCGTTTGCAGTGCCAGAGCACCTTCGGCAGGAAATAGAAGAATTCGAAGCTTTCTACGAGCAGCAGCAGCAGTCTAAAGAGTACGTTGCTTGCAGTAAGAAGCTATGGGCTGTTAGCCCCAAACACAAATGTGCTCCCTGTATGAGTGATCATTTCTCTCAGTATGTGGAGGAACAAGGTCCCGTGGACATGGGTAACAGGGTATTCACTGAAGAATATGAGTTTTTCCCAGAAGAAACTCGAAAGATAGTAGAACAAGCCGGAGGCTTAAAGTCTTTTCTCCTAGGATGTCCACGTTTTGTTGTGATTGACAACTGTATTGCACTGAGGAAGGTTACGTTACGGCTCAAGAAAAGAAGAAAGAAGAGAAACATGAAAGCAAAAGCAGAAGAGATTTCAAAAATGGAAGAGTATTTACGAGCTAAGCTATCGCCGAGTCCAACTGCTGGAGCGTCTCAGCCAGACGGACAGCCCAGCCCAGCGTCTGACTCGGCTTCAGCACCTGCTGCTAAGGATGCGGAGCCCAAACCCAAGCCTGCTGAGGCTCCCAAGCCTGTCTGTGAAGACACAAAGCTCGCGCCTGGGCCTGAGAGCTCTTCCAGTCCTCTTTCTGAAGACGAGAAGCCCGAAGGGGTCTCTTGTGATTCGCTCAAGCCACTGTCGAAGGCTGTGACGCCGGCTTATTGGGCTCGGTCACACGTCGTCACAACATTGTGCACCTACCTCCCTTTCCAGGGATTTGGGATGAGCCAGACTCCACCTGCATATATGAACATGCTGCCAGGCTTGCCCCGGTACACCAGCATCTACACGCCGCTGGCCGGCATCTCCTCGGAATACCAGCGCCAGAGGGCGATCGTGCCCCTGGTGCCGTCTCTTCTGGCCAATGACAGGGTGAAGAAAAATGCTCTTTTGTGTTTTAAGGATCCTAATTTGAATGCCGAGAAGGCTGCTGATAAACCGATTGCCTCGGAAACACAGATCTCTGAGGACTCTGTGGGAGGGTCTGGAAAGGCACAGTGGGACCCACGTGAGTCTGACGGAAACGAGGGGCACTCCAGGAGCTCTGACAGCAAGTGCGAAATCAGTGCAGAAAGTGTTCCACGTACGCAGGAGGTTGCTGTACAGGTGTCCTGGACCACAACACACCAAGAAGCCAATACTGAGCCATACGGTCCTTTTGAGGGGCAGCAGGGGGATATTTCACATATTGAAAAGGAGTACTCTGTCTTACAAGAGCAGCTTCAGGAAGTGTGTGAAAATTATGAGCACATAAAACTCAAGAGCTTAGAAGAGACCAGGGACCTGGAAGAAAAGCTGAAAAGGAACCTAGAAGAAAACAAGATCTCAGAGACAGAATTAGATTGGTTCATCCAAGATTTGGAAAGAGAATTTAAAAAATGGGAACAAGAGAAAAAGGAAATCCAAGACAGACTAAAAGCAATGAAGAAGAAAATTAAAAAGGTTTTGAATGCCAATGAAATGTCTACCCAGAAAAATGATGGAATGGATAAGGAATATGAGTTACATCTGGAGCAGTCCTCTGAACACAGTAACACATTTACAGATGAGAGAATGAAAATAGAAGATGGTATAAAAAAGGGGAGAGAACATTATGAAGAGAGTCACCAAAGGGCTCTGATTGCAGAGGTATCTGTGCTTGAGAACTGGAAGGAAGGTGAAATATATAAGCTACAGACCATGGCATCCAAAGCTGAAGCCTACCTGAAGCACCTCATGAGCAGTGATTCTGCAGCATATCCCAACAAGGAATCTGATATACATTCATGGGAATCATTTATTTCTACTGTTGCAAAAGAAATTACAAAAGCAGAGTCTCAGTTTGAAGACCAAATTAGGGCAATTAGAAATGGATCTCGGCTCCGAGAACTTCCTCAAGTGCGAGTTTCTGAGCTTTCATTTCCTGCCTGTAAAGTGGTCTGTGCCAAGTTAGACCCCGAGTGTCCAGGCCCTGAGAGTCAGGTGCCTGTGACTCCTGCAAGCAGCCAGACCGGGGCGGATGGCCAGGATGACTGCTCAGGAGAGGCCCCTGCTGCACCAGCACCTTCTGGGCAGCCGGAAGTGGCTCCACCGCCAGAGCCCCAGAGGGCCAGCCAGGCAGCTCCGCCAGCACCGAGCCCCGAAGCAGATGAGGGACAGCCTGTTCCTCCGGAGCGCACTCCCCATTCCAGCCAGTCTCCAAAGAAGCCGCTAAACAGTATTACCGAGCACCTGTCGGCAATATTCCCATGTCACACCAGCATTGAGCTTGCTGGTTTCATTAAAAAAGTTCGAAGCAAGAGCAAGAACTCGCTTGCAGAGCTGAGTATCGATGAAATTGTCCAGAGAGTGACGGAGCACATTCTAGATGAACAGAAAAAGAAGCCAAATCCCGGACAGGACAAAGGGACACCCGGCGCCGGCCCTGCCGCTTCTGCTTCTGTGACCACGTCCTCTGGGAGTCCACCCCCAGCGACTGCCAGGCCGCCGACCACCAAGGCTCAGAAAACACCACATGTCCCTGCACCAGGTGCAAGCGCCTGTGAAATATGCCGCAAGGTGTTCAAGTCCAAAAATACGTGTGCGCTGAAATGTGGGCACAAGTTTCACAAAGGGTGCTTTAAGCAGTGGCTTAAAGGACACAGCAGCTGCCCCACCTGCCGTGATGGTGCCCTCTCGTCGGGAGAGCAGTGA

Related Sequences

XP_004842444.1 Protein

Ttc3 PREDICTED: E3 ubiquitin-protein ligase TTC3 [Heterocephalus glaber]

Length: 1961 aa      
>XP_004842444.1
MDSFTEGDLSMADYALLDDCPDEDECAFAPELMTANYVHVTQLYCDGVGTQYKDYAQTDRNLEFDICNIWCSKPVSDLHDYCDAIKIYIFWPLLFKHQHTSVISRLHPCVEPSNSCASEISLRKLQCLELMEDIVDLAKKVSNDSFLIEGLLKIGYKIENKMLAMEEALNWIKYTGDVTILPKLGSVDTSWPLLRIFFTEYKYHITKVVMENCNLLEEFKTQNCAHCIQQGELMKIKGNEEFFNERFDIAIIYYTRAIEYRPDNHFLYGNRALCFLHTGQLRNALGDGKRATILKCSWPKGHYRYCTALSLLGEYDWALQANIKAQKLCKNDPEGIKDLIQQHVQLQKQIEDLQGRTPNKNPIKAFYESRAHIPRNLPAPAFTASLSFVEKGREFRKANQEMAYGGSENMKEIDEALRSDDCDCQTEFIQSPSHPPRHRGRHKPRNNESEKVNSNSELALPVDWRKLLEREFSKSSRAAQQDFANIMKMLRSLIQDGYTALLDQRCRSAAQSFSELLNGLDPQKIKQLNLAMINYVLVVYGLAMSLLGIGRPEELSEAENQFKRILEFYPNEGLDSLAYCGIGKVYLKKNRFQEALTHFEKAKTLIYRLPGVLTWPTSNVIIEESQPEKIRTILEKFVEECKFPPVPDAICSYQKCLGLSKIQIYITDPDFKGFIRISCCQYCKIEFHMNCWKKLKATTFNDKIDKDFLQGVCLTPDCEGIISKIIIFSRGGHVKCEFEHKVIKEKVPPRPILKQKCSSLEKLKLKEDKKLKRKIQKQEAKKLAQERREEDLRESNPPKNEQQKETVKNVQSCPFLDDRILQCIKQYSDKIKSGVLDTSKLLKELISWKVLTTEDYATFFSNKNFLTEAVDYVIGYLVQENNRVKTRMFLHVLCELQEVEPKVASWLQKLNSFGLDATGTFFARYGSLLKDLDFTIMTFLWNEKYGNKLDSIEGRQLEYFCEPVSLKEARCLIWLLEDHREKFPALHSALDEFFDIMDSRCTVLRKQDNEVPMTSTKVKNKGKKKRQKDTKLMLIGSVTTSLTPSNETSTSSQDPNRRNGDPTGPFAVPEHLRQEIEEFEAFYEQQQQSKEYVACSKKLWAVSPKHKCAPCMSDHFSQYVEEQGPVDMGNRVFTEEYEFFPEETRKIVEQAGGLKSFLLGCPRFVVIDNCIALRKVTLRLKKRRKKRNMKAKAEEISKMEEYLRAKLSPSPTAGASQPDGQPSPASDSASAPAAKDAEPKPKPAEAPKPVCEDTKLAPGPESSSSPLSEDEKPEGVSCDSLKPLSKAVTPAYWARSHVVTTLCTYLPFQGFGMSQTPPAYMNMLPGLPRYTSIYTPLAGISSEYQRQRAIVPLVPSLLANDRVKKNALLCFKDPNLNAEKAADKPIASETQISEDSVGGSGKAQWDPRESDGNEGHSRSSDSKCEISAESVPRTQEVAVQVSWTTTHQEANTEPYGPFEGQQGDISHIEKEYSVLQEQLQEVCENYEHIKLKSLEETRDLEEKLKRNLEENKISETELDWFIQDLEREFKKWEQEKKEIQDRLKAMKKKIKKVLNANEMSTQKNDGMDKEYELHLEQSSEHSNTFTDERMKIEDGIKKGREHYEESHQRALIAEVSVLENWKEGEIYKLQTMASKAEAYLKHLMSSDSAAYPNKESDIHSWESFISTVAKEITKAESQFEDQIRAIRNGSRLRELPQVRVSELSFPACKVVCAKLDPECPGPESQVPVTPASSQTGADGQDDCSGEAPAAPAPSGQPEVAPPPEPQRASQAAPPAPSPEADEGQPVPPERTPHSSQSPKKPLNSITEHLSAIFPCHTSIELAGFIKKVRSKSKNSLAELSIDEIVQRVTEHILDEQKKKPNPGQDKGTPGAGPAASASVTTSSGSPPPATARPPTTKAQKTPHVPAPGASACEICRKVFKSKNTCALKCGHKFHKGCFKQWLKGHSSCPTCRDGALSSGEQ