Sequence details NCBI ID: XM_004842366.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Psmg1
Gene Name proteasome (prosome, macropain) assembly chaperone 1, transcript variant X1
Entrez Gene ID 101715056

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PSMG1 ENSCPOG00000027117 (Guinea pig)

Gene Details

proteasome (prosome, macropain) assembly chaperone 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019759, Guinea pig)

Protein Percentage 84.43%
CDS Percentage 86.62%
Ka/Ks Ratio 0.22213 (Ka = 0.083, Ks = 0.3736)

PSMG1 ENSG00000183527 (Human)

Gene Details

proteasome (prosome, macropain) assembly chaperone 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000329915, Human)

Protein Percentage 87.5%
CDS Percentage 84.72%
Ka/Ks Ratio 0.11169 (Ka = 0.0645, Ks = 0.5779)

Psmg1 ENSMUSG00000022913 (Mouse)

Gene Details

proteasome (prosome, macropain) assembly chaperone 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023630, Mouse)

Protein Percentage 78.55%
CDS Percentage 79.01%
Ka/Ks Ratio 0.13913 (Ka = 0.1195, Ks = 0.8587)

Psmg1 ENSRNOG00000001643 (Rat)

Gene Details

proteasome (prosome, macropain) assembly chaperone 1 (Psmg1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002242, Rat)

Protein Percentage 76.62%
CDS Percentage 77.28%
Ka/Ks Ratio 0.1288 (Ka = 0.1315, Ks = 1.0211)

Genome Location

Sequence Coding sequence

Length: 873 bp    Location: 24850376..24859669   Strand: +
Raw sequence   
>XM_004842366.1
ATGGCAGCCACGTTCTTTGGAGAGGTGGTGAAAACGCCGTGCCGTGCGGGCGCGGAGGATGATGATGATGAGGAGGAGGAGGAGAGGAGGAGGGAGGCGCTCGAGGACCGGGAGGTGCGGCGGCAGCTGGCGCGGAAGAGAGAGGTGCGGCTTCTTCGAAGACAAACAAAAACAGCTCTGGAAGTTTCTCTGCTGGAAAAATATCCCTGCTCCAAGTTTATAATTGCTATAGGAAATAATGCAGTAGCATTTTTGTCATCCTTTGTTATGAATTCAGGAGTCTGGGAGGAAGTTGGTTGTGCTAAACTCTGGAATGAGTGGTGCAGAACAATGGATGCTGTACACATGTGCCCCACAGAGGCCTACTGTGTGTTTTACCATCTCAAATCAAACCCTTCGGTTTTCCTCTGTCAGTGCAGTTGTTACGTTGCTGAAGATCAGCAGTATCAGTGGCTGGAAAAGGTTTTCGGCTCTTGTCCAAAGAAGAACATGCAAGTCACTGTTCTCACATGTCGACATGTCACTGACTACAAAACCTCTGAATCCACTGGCAGCCTGCCTTCTCCTTTCCTGAGAGCCCTGAAAACACAGAGCTTCAAAGACCCTGCGTGCTGTTCCCTGCTGGAGCAGCCGAATATCGTGCATGACCTTCCTGCAGCAGTGCTGAGTTACTGTCAGGTATGGCAGATCCCCGCTATCCTGTACCTGTGCTACACCGATGTGATGAAGCTGGACCTCCTGACGGCAGAAGCCTTCAAGCCTGTGCTTTCTTCCAGAAGCCTGAAAGGGCTGGCTAAGGACATTGCCCACAGCTCAGAGACTCTGAAGAAGCTGACGACAGCACACGAAGTTCAGAGTAACATTTACACGTGA

Related Sequences

XP_004842423.1 Protein

Psmg1 PREDICTED: proteasome assembly chaperone 1 isoform X1 [Heterocephalus glaber]

Length: 290 aa      View alignments
>XP_004842423.1
MAATFFGEVVKTPCRAGAEDDDDEEEEERRREALEDREVRRQLARKREVRLLRRQTKTALEVSLLEKYPCSKFIIAIGNNAVAFLSSFVMNSGVWEEVGCAKLWNEWCRTMDAVHMCPTEAYCVFYHLKSNPSVFLCQCSCYVAEDQQYQWLEKVFGSCPKKNMQVTVLTCRHVTDYKTSESTGSLPSPFLRALKTQSFKDPACCSLLEQPNIVHDLPAAVLSYCQVWQIPAILYLCYTDVMKLDLLTAEAFKPVLSSRSLKGLAKDIAHSSETLKKLTTAHEVQSNIYT