Details from NCBI annotation

Gene Symbol Setd4
Gene Name SET domain containing 4, transcript variant X3
Entrez Gene ID 101708040

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SETD4 ENSCPOG00000003747 (Guinea pig)

Gene Details

SET domain containing 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003384, Guinea pig)

Protein Percentage 90.68%
CDS Percentage 91.52%
Ka/Ks Ratio 0.27374 (Ka = 0.0534, Ks = 0.195)

SETD4 ENSG00000185917 (Human)

Gene Details

SET domain containing 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000382163, Human)

Protein Percentage 84.55%
CDS Percentage 86.52%
Ka/Ks Ratio 0.24294 (Ka = 0.0864, Ks = 0.3556)

Setd4 ENSMUSG00000022948 (Mouse)

Gene Details

SET domain containing 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000109584, Mouse)

Protein Percentage 77.22%
CDS Percentage 78.36%
Ka/Ks Ratio 0.19529 (Ka = 0.1422, Ks = 0.728)

Setd4 ENSRNOG00000001699 (Rat)

Gene Details

SET domain containing 4 (Setd4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002308, Rat)

Protein Percentage 74.89%
CDS Percentage 77.32%
Ka/Ks Ratio 0.21459 (Ka = 0.1587, Ks = 0.7397)

Genome Location

Sequence Coding sequence

Length: 1542 bp    Location: 24130591..24062731   Strand: -
>XM_004842347.1
ATGAGTGGTGCAGAAACCGAGCTCCCTCTCCTGGAAGGAGTATGCACAGTACTTAGAATTCCTCTGCAAGCTTGGATCACCCAGAGCACAGTTCCGGTTTGCCCGCCCACGGCTACCGCTATTTTGGAAGCGGTGGCCCGCGGGGAGGAGAACGCGGAGGACTTCCGGGATCGCGGCCTTCCGTTGCCTGGGCAGCTACCTAGAAACTACATCTGTAGCATGCAGAAGAGAAGAGGAAGAACAAGCCGGATCAGAAGGCGAAAGCTCATCCGAGGTTCCGAGTCAAGAGGAGCGAATGAGAGCCACAAGCCCGAATTTATAGAGCTAAAGAAGTGGCTGAAAGATAGGAATTTTGAAGACACAAATTTAACACCTGCTCAATTTCCAGGTACAGGAAGAGGACTGATGACCAAGAAATCCCTGCAGGAGGGACAGATGATTATTTCACTACCTGAGAGTTGCCTGCTCACCACGGACACAGTGATTCGAAGCTCTTTAGGGGTGTACATCGCTAAGTGGAAGCCGCCTCCGTCTCCTCTGTTGGCTCTGTGCACCTTTTTAGTTTCAGAAAAGCATGCCGGCGCTCGGTCTGTCTGGAAGCCTTACCTGGATATTTTACCCAAGTCCTACACCTGCCCTGTTTATTTGGAGCCAGAAGTGGTTAATCTTCTTCCCGAACCTTTAAAAGCAAAGGCCAGAGAGCAGAGAGCTTCTGTGCAGGAGTTCTTTGCTTCCTCCAGAGACTTTTTTTCTTCCCTGCATCCTCTGTTTGAAGAGGCCATTGACAGAGTGTTCAGCTACAGCGCCCTCCTGTGGGCCTGGTGCACTGTCAACACCAGAGCAGTGTACCTGAGGACCAGGAGGCGGGACTGCCTTTCCCCAGAGCCCGACACTTGTGCGCTAGCTCCTTACCTGGATCTACTGAATCACAGCCCACATGTCCAGGTAAAAGCAGCATTTAATGAGGAAACTGGCTGTTACGAAATTAGAACGGCTTCAAGTTGTAGAAAACATGAAGAAGTGTTCATCTGCTATGGCCCTCATGATAACCACAGACTGCTCCTGGAATATGGATTTGTTTCTCTCCGCAATCCTCATGCCTGTGTTTATGTCTCAAGAGAAATACTTGTTAGATATCTTCCATCAACAGATAAACAGATGAACAGAAAGATTGCCATTTTAAAGGATCATGGTTTTATGGAAAATTTGACGTTTGGGTGGGATGGACCATCTTGGAGGTTACTCACAGCTCTGAAGTTGTTATGTCTGGAAGCTGAAAAATTTACTTGCTGGACAAAAGTACTTCTTGGAGAAGTAATTTCAGATACAAATGAGAAGACAAGTTTGAACATAGCGCGGAAAATGTGTTATTATCTCATAGAGGAGACTACTGCTGTGCTTCAAAAGGTTTCTCACATGAAGGATGAAAAAGTGTCTTTGATAAACCAGCTCACTTTGGTGGAAACGCTGAGGATGGAAGAGCTGAAAATTCTCAAGGCCTCTGCCGAGACCCTCAGCAGTTTGCAGACCACTCTCACCTGA

Related Sequences

XP_004842404.1 Protein

Setd4 PREDICTED: SET domain-containing protein 4 isoform X3 [Heterocephalus glaber]

Length: 513 aa      View alignments
>XP_004842404.1
MSGAETELPLLEGVCTVLRIPLQAWITQSTVPVCPPTATAILEAVARGEENAEDFRDRGLPLPGQLPRNYICSMQKRRGRTSRIRRRKLIRGSESRGANESHKPEFIELKKWLKDRNFEDTNLTPAQFPGTGRGLMTKKSLQEGQMIISLPESCLLTTDTVIRSSLGVYIAKWKPPPSPLLALCTFLVSEKHAGARSVWKPYLDILPKSYTCPVYLEPEVVNLLPEPLKAKAREQRASVQEFFASSRDFFSSLHPLFEEAIDRVFSYSALLWAWCTVNTRAVYLRTRRRDCLSPEPDTCALAPYLDLLNHSPHVQVKAAFNEETGCYEIRTASSCRKHEEVFICYGPHDNHRLLLEYGFVSLRNPHACVYVSREILVRYLPSTDKQMNRKIAILKDHGFMENLTFGWDGPSWRLLTALKLLCLEAEKFTCWTKVLLGEVISDTNEKTSLNIARKMCYYLIEETTAVLQKVSHMKDEKVSLINQLTLVETLRMEELKILKASAETLSSLQTTLT