Details from NCBI annotation

Gene Symbol Tmem50b
Gene Name transmembrane protein 50B, transcript variant X2
Entrez Gene ID 101725621

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMEM50B ENSCPOG00000009297 (Guinea pig)

Gene Details

transmembrane protein 50B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008346, Guinea pig)

Protein Percentage 98.1%
CDS Percentage 93.88%
Ka/Ks Ratio 0.0379 (Ka = 0.0092, Ks = 0.2435)

TMEM50B ENSG00000142188 (Human)

Gene Details

transmembrane protein 50B

External Links

Gene Match (Ensembl Protein ID: ENSP00000439768, Human)

Protein Percentage 99.37%
CDS Percentage 93.04%
Ka/Ks Ratio 0.00812 (Ka = 0.0029, Ks = 0.3541)

Tmem50b ENSMUSG00000022964 (Mouse)

Gene Details

transmembrane protein 50B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023686, Mouse)

Protein Percentage 97.47%
CDS Percentage 87.76%
Ka/Ks Ratio 0.01822 (Ka = 0.0122, Ks = 0.672)

Tmem50b ENSRNOG00000002028 (Rat)

Gene Details

transmembrane protein 50B (Tmem50b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002775, Rat)

Protein Percentage 97.47%
CDS Percentage 85.86%
Ka/Ks Ratio 0.01354 (Ka = 0.0124, Ks = 0.916)

Genome Location

Sequence Coding sequence

Length: 477 bp    Location: 21698146..21666447   Strand: -
>XM_004842312.1
ATGGCAGGCTTCCTAGATAATTTCCGATGGCCAGAATGTGAATGCATTGACTGGAGTGAGAGAAGAAATGCTGTGGCTTCCGTGGTTGCAGGCATATTGTTTTTTACAGGCTGGTGGATAATGATTGACGCAGCAGTGGTCTATCCTAAGCCGGAACAGTTGAACCATACTTTTCACACCTGTGGTGTGTTTTCCACATTGGCCTTCTTCATGATAAATGCGGTGTCCAACGCGCAGGTGAGAGGTGACAGCTATGAAAGCGGCTGTCTAGGAAGAACAGGTGCTCGAGTTTGGCTCTTCATTGGTTTCATGCTGATGTTCGGGTCACTTATTGCTTCCATGTGGATTCTTTTTGGGGCATATGTTACCCAGAATACCGATGTTTATCCAGGGCTAGCTGTGTTTTTTCAAAATGCTCTTATATTTTTTAGCACTCTGATCTACAAATTTGGAAGAACCGAAGAGCTCTGGACCTGA

Related Sequences

XP_004842369.1 Protein

Tmem50b PREDICTED: transmembrane protein 50B isoform X2 [Heterocephalus glaber]

Length: 158 aa      View alignments
>XP_004842369.1
MAGFLDNFRWPECECIDWSERRNAVASVVAGILFFTGWWIMIDAAVVYPKPEQLNHTFHTCGVFSTLAFFMINAVSNAQVRGDSYESGCLGRTGARVWLFIGFMLMFGSLIASMWILFGAYVTQNTDVYPGLAVFFQNALIFFSTLIYKFGRTEELWT