Details from NCBI annotation

Gene Symbol Paxbp1
Gene Name PAX3 and PAX7 binding protein 1
Entrez Gene ID 101719103

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PAXBP1 ENSCPOG00000012439 (Guinea pig)

Gene Details

PAX3 and PAX7 binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011193, Guinea pig)

Protein Percentage 96.72%
CDS Percentage 94.78%
Ka/Ks Ratio 0.09478 (Ka = 0.0172, Ks = 0.1816)

PAXBP1 ENSG00000159086 (Human)

Gene Details

PAX3 and PAX7 binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000328992, Human)

Protein Percentage 97.38%
CDS Percentage 93.38%
Ka/Ks Ratio 0.04594 (Ka = 0.0129, Ks = 0.281)

Paxbp1 ENSMUSG00000022974 (Mouse)

Gene Details

PAX3 and PAX7 binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000113835, Mouse)

Protein Percentage 94.32%
CDS Percentage 89.92%
Ka/Ks Ratio 0.06544 (Ka = 0.0279, Ks = 0.4257)

Paxbp1 ENSRNOG00000002036 (Rat)

Gene Details

Protein Gcfc1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002800, Rat)

Protein Percentage 94.54%
CDS Percentage 89.92%
Ka/Ks Ratio 0.06388 (Ka = 0.0268, Ks = 0.4191)

Genome Location

Sequence Coding sequence

Length: 2751 bp    Location: 21019344..20988162   Strand: -
>XM_004842291.1
ATGTTCCGAAAAGCCCGGCGGGTGAACGTGCGCAAGCGGAACGACTCGGAGGAGGAGGAGCGGGAGCGCGACGAGGATCAGGAGCCGCCGCCGTTGCTGCCGCCGCCGACCACTGGCGAAGAGCCGGGCCCTGGCGGCGGCGACAGGCCCCCCGGGGAGGAGTCGCTGCTGGGCCCGGGGCCGCCGCCGCCCTCCGTGCTGGCCCCAGGCCCGGGGGCCGAAGCCGGGGGCGGCTTTCCCGGCGGCGCGGAGCCCGGCAACGGGCTGAAGCCGCGCAAGAGGCCTCGTGAGAACAAAGAGGTTCCTAGGGCCAGCCTGCTGAGCTTCCAGGACGAGGAGGAAGAAAATGAAGAAGTTTTCAAAGTGAAGAAATCAAGTTATAGCAAAAAGATAGTAAAGTTGCTCAAGAAAGAATATAAAGAAGATCTTGAAAAATCAAAGATTAAGAACGAACTCAACTCATCAGCCGACAATGAACAATCTCTGGATAAAACAGGGCATGTTAAGGACACAAATCAAGAAGATGGAGTTATCATTGAGCACGGCGAAGATGAGATGGACATGGAGAGTGAGAAGGAGGAGGACAAACTGAAGGGTGCAGGCGCGTTCTCCAACGCTTTATCGTCTTTAAACGTTCTCCGTCCGGGAGAAATTCCAGACGCAGCTTTTATACATGCTGCAAGGAAAAAGCGTCAAATGGCTCGGGAATTGGGAGATTTCACTCCTCATGATAATGAGCCTGGTAAAGGCCGCCTTGTTAGAGAAGATGAGAATGATGCCAGTGATGATGAAGATGATGATGAGAAACGCCGTATCGTTTTTTCTGTGAAAGAAAAGTCACAAAGACAAAAAATTGCTGAGGAAATAGGTATTGAGGGGAGTGACGATGATGCTCTGGTAACTGGAGAACAAGATGAAGAACTCAGCCGATGGGAACAGGAGCAGATAAGAAAAGGAATTAATATCCCTCAGGTTCAAGCAAGCCAGCCTGCTGAAGTGAATATGTATTACCAGAACACTTACCAGACAATGCCTTATGGTTCATCCTATGGCATTCCGTATAGTTACACAGCCTATGGATCATCAGATGCCAAATCTCAAAAAACAGATAATACAGTCCCTTTCAAAACTCCCAGTAATGAGATGACTCCCGTTACTATTGATTTGGTAAAGAAACAGCTTAAAGACAGGTTGGACTCCATGAAAGAATTGCACAGAACAAATCGACAGCAGCATGAGAAACATCTGCAAAGCCGAGTGGACTCTACCAGGGCTATTGAAAGATTAGAAGGGTCTTCTGGGGGTATTGGTGAACGGTATAAATTTTTGCAAGAAATGCGAGGGTATGTCCAAGACTTGCTTGAGTGTTTCAGTGAAAAGGTGCCACTGATTAATGAACTTGAATCAGCAATACATCAGCTGTACAAACAGCGAGCTTCCCGCCTTGTCCAAAGACGACAAGATGATATTAAAGATGAATCTTCGGAGTTTTCAAGCCATTCAAATAAGGCTCTAATGGCCCCAAATCTTGATTCCTTTGGCCGTGATCGGGCACTGTATCAAGAGCATGCAAAACGTCGGATTGCAGAGCGGGAGGCCAGAAGAACTCGTCGTAGACAAGCCAGAGAGCAAACTGGTAAGATGTCAGATCACCTTGAAGGCCTTTCCAGTGATGATGAAGAAACTTCTACAGATATTACTAATTTCAATCTTGAAAAAGATCGTATTTCAAAAGAATCCAGCAAAGTGTTTGAAGATGTCCTTGAGAGTTTCTATTCAATAGACTGTATTAAGTTACAGTTTGAAGCATGGCGTTCAAAATACTACACGTCCTACAAGGATGCTTACATTGGGCTTTGTTTGCCAAAGTTATTCAACCCTCTTATCAGACTGCAGCTCCTTACTTGGACTCCTCTTGAGGCAAAATGTCGTGACTTTGAAAATATGCTCTGGTTTGAATCTCTGCTGTTCTATGGCTGTGAAGAACGGGAGCAAGAAAAAGATGATGTAGATGTTGCACTACTGCCTACCATTGTGGAAAAGGTGATTCTTCCCAAACTAACAGTGATAGCTGAAAACATGTGGGATCCTTTCTCTACAACACAGACTTCAAGAATGGTTGGAATTACACTGAAGTTAATAAATGGGTATCCTTCAGTAGCGAATGCGGAAAATAAAAACACACAGGTATACCTAAAGGCGCTTTTATTGAGAATGAGAAGAACTTTAGATGATGATGTATTCATGCCTTTATATCCCAAAAATGTCTTAGAAAATAAGAATTCTGGGCCTTACTTGTTTTTTCAACGACAGTTTTGGTCTTCAGTTAAGCTATTAGGAAATTTTCTTCAGTGGTATGGTATCTTCTCAAATAAAACTCTTCAGGAATTATCAATAGATGGTTTATTAAATAGATACATTCTCATGGCTTTTCAAAATTCAGAATATGGAGATGACAGCATCAAAAAAGCCCAAAATGTAATGAATTGTTTCCCCAAACAGTGGTTTGTAAATCTGAAAGGAGAAAGAACTATTTCTCAGTTAGAAAACTTTTGCCGATACCTTGTACACTTAGCAGATACAATTTACAGGAATAGTATTGGATGCTCTGATGTGGAAAAAAGAAATGCAAGGGAAAACATAAAACAGATAGTAAAACTTCTTGCGAGTGTTCGAGCTTTGGATCATGCTATGTCTGTTGCAAGTGATCACAATGTGAAAGAATTTAAGTCTTTGATTGAAGGAAAATAG

Related Sequences

XP_004842348.1 Protein

Paxbp1 PREDICTED: PAX3- and PAX7-binding protein 1 [Heterocephalus glaber]

Length: 916 aa      View alignments
>XP_004842348.1
MFRKARRVNVRKRNDSEEEERERDEDQEPPPLLPPPTTGEEPGPGGGDRPPGEESLLGPGPPPPSVLAPGPGAEAGGGFPGGAEPGNGLKPRKRPRENKEVPRASLLSFQDEEEENEEVFKVKKSSYSKKIVKLLKKEYKEDLEKSKIKNELNSSADNEQSLDKTGHVKDTNQEDGVIIEHGEDEMDMESEKEEDKLKGAGAFSNALSSLNVLRPGEIPDAAFIHAARKKRQMARELGDFTPHDNEPGKGRLVREDENDASDDEDDDEKRRIVFSVKEKSQRQKIAEEIGIEGSDDDALVTGEQDEELSRWEQEQIRKGINIPQVQASQPAEVNMYYQNTYQTMPYGSSYGIPYSYTAYGSSDAKSQKTDNTVPFKTPSNEMTPVTIDLVKKQLKDRLDSMKELHRTNRQQHEKHLQSRVDSTRAIERLEGSSGGIGERYKFLQEMRGYVQDLLECFSEKVPLINELESAIHQLYKQRASRLVQRRQDDIKDESSEFSSHSNKALMAPNLDSFGRDRALYQEHAKRRIAEREARRTRRRQAREQTGKMSDHLEGLSSDDEETSTDITNFNLEKDRISKESSKVFEDVLESFYSIDCIKLQFEAWRSKYYTSYKDAYIGLCLPKLFNPLIRLQLLTWTPLEAKCRDFENMLWFESLLFYGCEEREQEKDDVDVALLPTIVEKVILPKLTVIAENMWDPFSTTQTSRMVGITLKLINGYPSVANAENKNTQVYLKALLLRMRRTLDDDVFMPLYPKNVLENKNSGPYLFFQRQFWSSVKLLGNFLQWYGIFSNKTLQELSIDGLLNRYILMAFQNSEYGDDSIKKAQNVMNCFPKQWFVNLKGERTISQLENFCRYLVHLADTIYRNSIGCSDVEKRNARENIKQIVKLLASVRALDHAMSVASDHNVKEFKSLIEGK