Details from NCBI annotation

Gene Symbol Scaf4
Gene Name SR-related CTD-associated factor 4, transcript variant X4
Entrez Gene ID 101713662

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SCAF4 ENSCPOG00000012443 (Guinea pig)

Gene Details

SR-related CTD-associated factor 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011197, Guinea pig)

Protein Percentage 91.47%
CDS Percentage 90.33%
Ka/Ks Ratio 0.21048 (Ka = 0.0559, Ks = 0.2657)

SCAF4 ENSG00000156304 (Human)

Gene Details

SR-related CTD-associated factor 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000286835, Human)

Protein Percentage 93.97%
CDS Percentage 92.08%
Ka/Ks Ratio 0.13154 (Ka = 0.0322, Ks = 0.2449)

Scaf4 ENSMUSG00000022983 (Mouse)

Gene Details

SR-related CTD-associated factor 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000044472, Mouse)

Protein Percentage 90.58%
CDS Percentage 87.98%
Ka/Ks Ratio 0.13113 (Ka = 0.0519, Ks = 0.3958)

Scaf4 ENSRNOG00000002104 (Rat)

Gene Details

SR-related CTD-associated factor 4 (Scaf4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000047258, Rat)

Protein Percentage 90.95%
CDS Percentage 87.96%
Ka/Ks Ratio 0.12337 (Ka = 0.0501, Ks = 0.4057)

Genome Location

Sequence Coding sequence

Length: 3378 bp    Location: 20097736..20040416   Strand: -
>XM_004842279.1
ATGGACGCCGTCAACGCCTTCAACCAGGAGCTCTTTTCACTTATGGATATGAAACCTCCCATCTCTAGAGCCAAGATGATTCTCATCACTAAAGCTGCTATTAAAGCTATTAAGCTTTATAAGCATGTAGTTCAAATAGTAGAAAAATTCATCAAAAAGTGTAAACCAGAATACAAAGTTCCAGGGTTATATGTAATTGACTCAATTGTGCGACAGTCTCGTCATCAGTTTGGAACTGATAAAGATGTTTTTGGGCCAAGATTCTCTAAAAACATAACTGCCACATTCCAATATTTATATCTTTGTCCATCTGAAGATAAGAGTAAAATAGTTCGTGTGCTGAACCTTTGGCAAAAAAATGGAGTGTTCAAAATTGAGATTATTCAACCTCTTTTGGACATGGCAGCAGGAACCAGTAATGCTGCCCCTGTAGCAGAAAATGTCACCAATAATGAAGGCTCACCTCCACCTCCAGTAAAAATTTCTTCTGAACCTCCACAAGCCACTCCGAACTCCATACCTACTGTACCACAGTTGCCCAGCTCTGATGCTTTCGCTGCTGTGGCTCAGCTGTTTCAGACAACTCAAGGCCAACAGCTTCAGCAGATCCTTCAGACTTTTCAACAACCTCCAAAACCACAGTCTCCCGCCCTTGACAATGCTGTGATGGCTCAGGTTCAGGCTATCACAGCTCAGTTAAAGACAGCTCCTACACAACCACCTGAACAAAAAGCTGCTTTCCCCCCACCTGAACAAAAAACTGCATTTGATAAGAAGCTGCTTGATAGATTTGATTATGATGATGAGCCAGAAGCTGTGGAAGAATCAAAAAAAGAGGATGCCGCTGCCATTCTCCCTGCAGCCCCTGCTGCAGCAGCCGCCGCCACTACTGCTGCTGCTTCAGCACCTCCTGTGCCTGTCGTGGCCACGCCTGTCCCCATTGCTGCTGCTGCACCTGTTGCACCCGCTGCTGCCTCTCCTCCGCCGCAGGCACCATTTGGGTTTCCTGGAGATAGCATGCAGCAGCCAACATACACACATCAAAATATGGATCAATTTCAGCCTCGAATGATGGGAATACAAGATCCCATGCGCCACCAGGTTCCACTTCCTCCTAATGGACAGATGCCAGGATTTGGACTTCTTCCCACACCTCCATTTCCTCCCATGGCTCAGCCTGTGATTCCTCCAACTCCACCAGTGCAGCAGACTTTCCAACCCTCTTTTCAGGCACAAACCGAACAACTTACACAGAAGCCACATCAGCAGGAGATGGAAGTAGAACAACCTTGTATTCCAGAGGTTAAGCGGCATATGTCTGATAACAGAAAGTCAAGATCTAGGTCACCAAAGAGGAGACGATCAAGATCTGGTTCTAGATCTCGAAGGTCTCGTCACCGACGTTCTCGATCTCGATCCAGGGATAGACGTAGACATTCTCCTCGGTCTCGATCCCAAGAAAGACGGGATCGAGAGAAAGAGAGGGAACGTCGACAGAAAGGCCTTCCTCAGATCAAACCAGAAACTGCAAGTGTTTGTAGTACTACTCTCTGGGTGGGACAGCTGGACAAAAGGACTACTCAGCAGGATGTTGCAAGTCTCTTGGAAGAGTTTGGTCCCATTGAATCAATTAATATGATTCCTCCAAGGGGTTGTGCCTATATCGTTATGGTTCATAGGCAAGATGCTTATCGTGCCCTGCAGAAACTGAGTCGAGGAAATTATAAAGTGAACCAGAAGTCCATAAAGATTGCCTGGGCCTTAAACAAAGGAATAAAAGCAGATTATAAACAGTATTGGGATGTTGAACTTGGTGTTACTTATATTCCATGGGACAAAGTAAAGCCTGAGGAACTGGAGAGTTTTTGTGAAGGAGGAATGTTGGACAGTGATACACTTAACCCAGATTGGAAAGGAATTCCCAAGAAGCCTGAAAATGATGTTGCTCAAAACGGAGGTGCGGAAACCTCACACACAGAACCAGTATCGCCCATACCTAAGCCTTTGCCTGTGCCTGTCCCTCCTATTCCTGTTCCTGCACCTATAACAGTGCCACCTCCTCAGGTCCCACCACATCAGCCGGGTCCTCCTGTAGTTGGTGCTCTGCAGCCGCCCACTTTCACACCTCCCTTGGGAATTCCTCCTCCAGGCTTTGGGCCTGGTGTTCCTCCTCCACCTCCCCCTCCACCATTTTTGCGCCCAGGATTCAATCCAATGCATTTACCACCAGGTTTTCTTCCTCCTGGACCCCCACCTCCTATAACTCCACCAGTATCCATTCCTCCTCCTCACACTCCACCAATAAGCATCCCAAACTTGGTGTCTGGGGCTAGAGGAAATGCCGAATCTGGTGACAGTGTGAAAATGTATGGCTCTGCTGTGCCACCTGCTGCACCCACGAATCTGCCTACCCCTCCTGTAACCCAGCCTGTTTCACTTCTTGGCACTCAGGGAGTCGCACCTGGCCCTGTAATTGGGCTGCAGGCGCCATCAACTGGTCTTCTCGGTGCCCGACCCGGCCTCATCCCACTTCAGCGCCCTCCGGGAATGCCTCCCCCTCATCTGCAGCGGTTTCCTATGATGCCGCCTCGCCCCATGCCGCCACACATGATGCACAGAGGGCCGCCACCGGGACCAGGGGGCTTCGCGATGCCGCCACCTCATGGAATGAAAGGGCCCTTTCCTCCACACGGGCCCTTTGTGAGGCCCAGTGGAATACCAGGGCTGGGGGGCCCAGGACCAGGCCCCGGGGGTCCTGAAGACAGAGATGGAAGGCAGCAGCCGCCTGCGCCACCGCAGCAGCAGGCGCCGCCGCCACCGCAGCAGCAGCAGCCGCCCTCACAGCAACAGCCGCCAGCAGCTCAGCAGCAGCCACAGCAGTTTAGAAATGAGAGCAGGCAGCAGTTCAATTCAGGTAGAGACCAAGAAAGGTTTGGAAGAAGATCTTTCGGAAATAGGGTGGAAAATGACCGGGAACGGTATGGGAACCGTAACGATGATAGAGATAATAGTAATCGTGAAAGGAGGGAGTGGGGAAGAAGAAGCCCTGAGCGGGACAGGCACAGAGACTCGGAGGAGAGAAGCAGACGCTCTAGTGGGCATCGAGACAGAGAGAGAGATTCCAGAGATAGGGAATCTCGTAGAGAGAAGGAGGAACCCCGAGGAAAGGAGAAGCCTGAGGTGACAGACAGGGCCAGTGGTAACAAAGCCACTGAACCTCCCCTTAGCCGGGTGGGAAATGTAGACACTGTTTCAGAACTTGATAAGGGGGAGGCCCAGGCCACTGTGGCAAAACCTCCTGAAGAGTCACCTGCTGAGGCTACCTCATCCGTTGAACCTGAAAAGGATTCTGGCTCAGCAGCAGAGGCTCCTCGCTAG

Related Sequences

XP_004842336.1 Protein

Scaf4 PREDICTED: splicing factor, arginine/serine-rich 15 isoform X4 [Heterocephalus glaber]

Length: 1125 aa      View alignments
>XP_004842336.1
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKISSEPPQATPNSIPTVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTAPTQPPEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDAAAILPAAPAAAAAATTAAASAPPVPVVATPVPIAAAAPVAPAAASPPPQAPFGFPGDSMQQPTYTHQNMDQFQPRMMGIQDPMRHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQTFQPSFQAQTEQLTQKPHQQEMEVEQPCIPEVKRHMSDNRKSRSRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQIKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKPENDVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPTFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNLVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPMMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPSGIPGLGGPGPGPGGPEDRDGRQQPPAPPQQQAPPPPQQQQPPSQQQPPAAQQQPQQFRNESRQQFNSGRDQERFGRRSFGNRVENDRERYGNRNDDRDNSNRERREWGRRSPERDRHRDSEERSRRSSGHRDRERDSRDRESRREKEEPRGKEKPEVTDRASGNKATEPPLSRVGNVDTVSELDKGEAQATVAKPPEESPAEATSSVEPEKDSGSAAEAPR