Details from NCBI annotation

Gene Symbol Sod1
Gene Name superoxide dismutase 1, soluble
Entrez Gene ID 101713304

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SOD1 ENSCPOG00000014223 (Guinea pig)

Gene Details

Superoxide dismutase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012815, Guinea pig)

Protein Percentage 90.91%
CDS Percentage 90.69%
Ka/Ks Ratio 0.23467 (Ka = 0.0544, Ks = 0.2319)

SOD1 ENSG00000142168 (Human)

Gene Details

superoxide dismutase 1, soluble

External Links

Gene Match (Ensembl Protein ID: ENSP00000270142, Human)

Protein Percentage 85.06%
CDS Percentage 86.15%
Ka/Ks Ratio 0.26701 (Ka = 0.094, Ks = 0.3519)

Sod1 ENSMUSG00000022982 (Mouse)

Gene Details

superoxide dismutase 1, soluble

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023707, Mouse)

Protein Percentage 83.77%
CDS Percentage 82.47%
Ka/Ks Ratio 0.18483 (Ka = 0.1052, Ks = 0.5692)

Sod1 ENSRNOG00000002115 (Rat)

Gene Details

superoxide dismutase 1, soluble (Sod1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002885, Rat)

Protein Percentage 81.82%
CDS Percentage 82.25%
Ka/Ks Ratio 0.24844 (Ka = 0.1226, Ks = 0.4935)

Genome Location

Sequence Coding sequence

Length: 465 bp    Location: 20032009..20037958   Strand: +
>XM_004842275.1
ATGGCGACCAAGGCCGTGTGCGTGCTGAAGGGCGACGGCCCGGTGCACGGCACCATCCACTTCGAGCAGCAGGAGGGAAACGGGCCAGTTGTGGTAAAGGGACGCATTGCAGGATTGAATGAAGGCCAGCACGGATTCCATGTCCATGAGTTTGGCGATAACACCAAAGGCTGTACCAGTGCAGGTCCTCACTTTAATCCTCTGTCCAAAAAACATGGTGGGCCAAAGGACGAAGAGAGGCACGTTGGAGACCTGGGCAATGTGACTGCAGGCACAGATGGTGTGGCTGAAGTATCCATTGAGGATTCTTTGATCTCACTTTTCGGACCGAATTCCATCATTGGCCGCACAATGGTGGTCCATGAAAAAGAAGATGACCTGGGCAAAGGTGGGAATGAAGAAAGTACAAAGACCGGAAATGCTGGAAGTCGCCTGGCTTGTGGTGTGATTGGGATCGCCCAGTAA

Related Sequences

XP_004842332.1 Protein

Sod1 PREDICTED: superoxide dismutase [Cu-Zn] [Heterocephalus glaber]

Length: 154 aa      View alignments
>XP_004842332.1
MATKAVCVLKGDGPVHGTIHFEQQEGNGPVVVKGRIAGLNEGQHGFHVHEFGDNTKGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTAGTDGVAEVSIEDSLISLFGPNSIIGRTMVVHEKEDDLGKGGNEESTKTGNAGSRLACGVIGIAQ