Sequence details NCBI ID: XM_004842257.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Grik1
Gene Name glutamate receptor, ionotropic, kainate 1, transcript variant X3
Entrez Gene ID 101705989

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GRIK1 ENSCPOG00000000196 (Guinea pig)

Gene Details

glutamate receptor, ionotropic, kainate 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000173, Guinea pig)

Protein Percentage 93.81%
CDS Percentage 90.57%
Ka/Ks Ratio 0.1318 (Ka = 0.0416, Ks = 0.3157)

GRIK1 ENSG00000171189 (Human)

Gene Details

glutamate receptor, ionotropic, kainate 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000382791, Human)

Protein Percentage 93.06%
CDS Percentage 89.0%
Ka/Ks Ratio 0.10717 (Ka = 0.0439, Ks = 0.4097)

Grik1 ENSMUSG00000022935 (Mouse)

Gene Details

glutamate receptor, ionotropic, kainate 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000072107, Mouse)

Protein Percentage 98.55%
CDS Percentage 90.96%
Ka/Ks Ratio 0.01575 (Ka = 0.0068, Ks = 0.4302)

Grik1 ENSRNOG00000001575 (Rat)

Gene Details

glutamate receptor, ionotropic, kainate 1 (Grik1), transcript variant 2, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000045594, Rat)

Protein Percentage 96.89%
CDS Percentage 89.37%
Ka/Ks Ratio 0.03187 (Ka = 0.0162, Ks = 0.5078)

Genome Location

Sequence Coding sequence

Length: 2610 bp    Location: 17987312..17592610   Strand: -
Raw sequence   
>XM_004842257.1
ATGCAGCGCGGCACCCTCCTCGCCCAGCCCGGGCTCTGGACCGGGGACATCGGCTGGACGTTCCTCTATTTCCTCTGCTGCGCTCTCCCTCAGACGGCCCCGCAAGTGCTCCGGATCGGAGGGATTTTTGAAACTGTGGAAAACGAGCCCGTTAATGTTGAAGAATTAGCTTTCAAGTTCGCAGTCACCAGCATTAACAGGAACCGAACCCTGATGCCTAACACCACATTAACCTATGACATCCAGAGAATTAATCTTTTTGATAGTTTTGAAGCCTCGCGGAGAGCCTGTGACCAGTTGGCTCTCGGGGTGGCTGCCCTCTTCGGCCCTTCTCATAGCTCCTCCGTCAGTGCTGTGCAGTCCATTTGCAATGCTCTGGAAGTTCCACACATACAGACGCGCTGGAAGCACCCCTCGGTGGACAATAAGGACTTGTTTTACATCAACCTCTACCCAGATTATGCAGCTATCAGCAGGGCAATCCTGGATCTGGTCCTCTATTACAACTGGAAAACAGTGACCGTGGTGTATGAAGACAGCACAGGTCTAATTCGTCTGCAAGAGCTCATCAAAGCTCCCTCCAGATATAACATTAAAATCAAAATCCGCCAGCTGCCCTCTGGGAATAAAGATGCCAAGCCCTTACTCAAGGAGATGAAGAAGGGCAAGGAGTTCTATGTGATATTTGATTGCTCGCATGAAACAGCAGCTGAAATCCTTAAACAGATTTTGTTCATGGGCATGATGACTGAATACTACCACTACTTTTTCACAACCTTGGACTTATTTGCTTTAGATCTAGAGCTCTACAGGTACAGTGGAGTGAATATGACTGGGTTCCGGCTGCTCAACATAGACAATCCGCACGTATCATCCATCATCGAGAGGTGGTCCATGGAAAGGCTGCAGGCCCCACCTAGGCCTGAGACTGGTCTTTTGGACGGCATGATGACAACGGAAGCAGCTCTGATGTACGATGCAGTGTATATGGTGGCCATCGCCTCCCACCGAGCCTCACAGCTGACCGTCAGCTCCCTACAGTGCCATCGACACAAGCCATGGCGCCTGGGACCCCGATTTATGAACCTGATCAAAGAGATTGGGATTTGGAACTCCAACAGTGGACTCAACATGACGGATGGCAACAAAGACAAGACCAACAATATCACCGATTCACTGGCCAACCGAACACTCATTGTCACCACCATTCTGGAAGAGCCCTATGTGATGTACAGGAAATCGGATAAGCCCCTATATGGGAATGACAGATTTGAAGGATATTGCCTGGATCTGCTGAAAGAATTGTCAAACATCCTAGGTTTCCTTTATGATGTTAAACTAGTCCCTGATGGCAAATATGGTGCCCAGAATGACAAAGGAGAGTGGAATGGGATGGTTAAAGAACTCATAGATCACAGGGCTGATCTGGCAGTGGCTCCTCTTACCATCACTTATGTTCGGGAGAAGGTCATTGACTTCTCCAAGCCCTTCATGACCTTGGGCATCAGCATTCTCTACCGGAAGCCCAATGGGACCAACCCGGGTGTCTTCTCCTTCCTCAACCCTCTGTCTCCAGACATTTGGATGTACGTGCTCTTAGCTTGCTTGGGAGTCAGTTGTGTTCTCTTTGTCATTGCAAGGTTTACACCCTATGAATGGTATAACCCCCATCCGTGCAACCCTGACTCAGATGTGGTGGAAAACAATTTTACTTTACTAAATAGTTTCTGGTTTGGAGTTGGAGCTCTCATGCAGCAAGGATCAGAGCTGATGCCTAAAGCTCTCTCGACCAGAATAGTTGGTGGAATATGGTGGTTTTTCACCCTAATCATCATTTCATCCTACACTGCCAATCTTGCTGCCTTCTTGACAGTAGAGAGGATGGAATCCCCCATAGATTCGGCAGATGACCTGGCAAAGCAAACCAAGATAGAATACGGCACAGTCAGAGATGGATCAACAATGACCTTCTTCAAGAAATCAAAGATATCCACTTACGAGAAGATGTGGGCTTTCATGAGCAGTAGGCAACAGAGTGCCCTGGTGAAAAACAGTGATGAGGGTATCCAAAGAGTGCTCACCATGGACTACGCCCTGCTGATGGAGTCCACTAGCATCGAGTATGTGACACAGAGAAACTGCAACCTCACCCAGATCGGGGGCCTCATCGACTCCAAAGGTTATGGAGTGGGGACGCCTATCGGCTCTCCTTACCGGGATAAAATTACAATTGCTATCCTTCAACTACAAGAAGAGGGGAAGCTGCATATGATGAAAGAGAAATGGTGGCGGGGAAATGGCTGCCCTGAAGAAGATAGCAAAGAGGCCAGTGCTCTGGGAGTAGAAAATATTGGGGGCATCTTCATTGTCCTGGCTGCTGGACTGGTCCTTTCTGTATTTGTAGCCATTGGAGAATTTATTTACAAATCGCGGAAGAACAGTGATAATGACCAGTGTCTCTCTTTCAATGCCATCATGGAAGAACTGGGAATCTCTCTGAAGAATCAAAAAAAATTAAAGAAAAAGTCAAGAACTAAGGGGAAATCTTCTTTCACAAGTATTCTTACTTGTCATCAGAGACGAACTCAGAGGAAAGAGACTGTGGCATGA

Related Sequences

XP_004842314.1 Protein

Grik1 PREDICTED: glutamate receptor ionotropic, kainate 1 isoform X3 [Heterocephalus glaber]

Length: 869 aa      View alignments
>XP_004842314.1
MQRGTLLAQPGLWTGDIGWTFLYFLCCALPQTAPQVLRIGGIFETVENEPVNVEELAFKFAVTSINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDLFYINLYPDYAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLNIDNPHVSSIIERWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEIGIWNSNSGLNMTDGNKDKTNNITDSLANRTLIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGTVRDGSTMTFFKKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTMDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDSKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRKNSDNDQCLSFNAIMEELGISLKNQKKLKKKSRTKGKSSFTSILTCHQRRTQRKETVA