Sequence details NCBI ID: XM_004842240.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Adamts1
Gene Name ADAM metallopeptidase with thrombospondin type 1 motif, 1
Entrez Gene ID 101697805

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ADAMTS1 ENSCPOG00000006447 (Guinea pig)

Gene Details

ADAM metallopeptidase with thrombospondin type 1 motif, 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005807, Guinea pig)

Protein Percentage 93.11%
CDS Percentage 92.11%
Ka/Ks Ratio 0.15118 (Ka = 0.0356, Ks = 0.2355)

ADAMTS1 ENSG00000154734 (Human)

Gene Details

ADAM metallopeptidase with thrombospondin type 1 motif, 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000284984, Human)

Protein Percentage 87.47%
CDS Percentage 86.45%
Ka/Ks Ratio 0.16838 (Ka = 0.0724, Ks = 0.4299)

Adamts1 ENSMUSG00000022893 (Mouse)

Gene Details

a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023610, Mouse)

Protein Percentage 85.86%
CDS Percentage 82.31%
Ka/Ks Ratio 0.10092 (Ka = 0.077, Ks = 0.7629)

Adamts1 ENSRNOG00000001607 (Rat)

Gene Details

ADAM metallopeptidase with thrombospondin type 1 motif, 1 (Adamts1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002187, Rat)

Protein Percentage 86.18%
CDS Percentage 83.23%
Ka/Ks Ratio 0.1127 (Ka = 0.0766, Ks = 0.6793)

Genome Location

Sequence Coding sequence

Length: 2847 bp    Location: 14811283..14802985   Strand: -
Raw sequence   
>XM_004842240.1
ATGGGAAGAGCGGAGCGGCCCCCGAGGTCTCCGAGCTCCCAGCCTACACCCTGGTTGCTGTTACTTCTCGCGGCGACCCCAGTACTGCTGACGGTGCCCGGTGCTCTCGGGCGCCCTGCCGAGGACGAGGAGCTCGTGCTGCCAGCCTTGGAGCGCGCCCCGGGACAGGAGACCACACGCCTCCGCCTGGACGCCTTTGGCCGGCAGTTGCACCTGGAACTGCAGCCCGACCACGGTTTCTTGGCTCCTGGCTTCACGCTCCAGACTGTGGGGCGCAAACCTGAGCCCGAGGCGCACCGTTTGGACCCTACGGGCGACCTGGCGCAGTGCTTTTACTCCGGCACGGTGAATGGTGACCCCAGCTCAGCAGCCGCTCTCAGCCTCTGCGAGGGCGTGCGCGGCGCCTTCTACCTGCAGGGCGAAGAGTTCTTCATCCAGCCCGCGCCTGCCGCTGCTACCGAGCGCCTCACCCCCTCCGCCGCCAAGGAGGAGACTCAGGCGCTGCCTCAGTTCCATCTCGTGCGGCGAAGGCGGCGGGGCGGCGGCGGCTCCAAGTGCGGAGTCCTGGACGCCGAGACCCTGCCCGCGAGGGGTGCAGACCGAGACGGGGAGGACGCAGGGGCGCAGAGGCCACTGCGGGACCCGGCGCTGCCACGCGCGGGGCAACCAACAGGAACTGGAAGTGTAAGAAAGAAGCGATTTGTGTCCAGCCCTCGCTATGTGGAAACCATGCTTGTGGCAGACCAGTCAATGGCTGAGTTCCATGGCAGTGGTCTAAAGCATTACCTTCTCACCCTGTTCTCGGTGGCAGCCAGGCTGTACAAACACCCCAGTATTAGGAATTCAGTTAGCCTGGTGGTAGTGAAGATTTTGGTTATCTATGAGGAGCAGAAGGGACCAGAGGTGACCTCCAATGCTGCCTTCACTCTGCGGAACTTCTGCAATTGGCAAAAGCAGCACAATCCTCCCAGTGACCGCGATGCAGAGCACTATGACACAGCGATTCTTTTCACCAGACAGGACCTATGTGGGGCCCAGACATGCGATACTCTTGGGATGGCAGATGTTGGAACTGTGTGTGATCCTAGCAGAAGCTGCTCAGTCATAGAAGATGATGGTTTACAAGCTGCCTTCACCACAGCCCATGAGTTAGGCCACGTGTTTAACATGCCACATGATGATGCAAAGCAGTGTGCCAGCCTGAATGTCATGAGCCAGGATTCCCACATGATGGCCTCAATGCTTTCCAGTTTGGACCGAAGCCAGCCGTGGTCTCCTTGCAGTGCCTACATGATCACATCATTTCTGGATAACGGTCATGGGGAATGTTTGATGGACAAGCCACAGAATTCCATACAGCTGCCGTCTGATCTCCCTGGGACCCTGTATGATGCCAATCGGCAGTGCCAGTTCACATTTGGGGAGGAGTCCAAACACTGTCCTGATGCGGCCAGCACATGTGCCACTCTGTGGTGCACCGGCACCTCTGGCGGGCTGCTGGTGTGCCAAACCAAACACTTCCCGTGGGCCGATGGCACCAGCTGTGGAGAAGGGAAGTGGTGTGTCAATAGCAAGTGTGTGAACAAGACTGACAAGAAACACTTTGATACTCCTGTTCATGGAAGCTGGGGACCATGGGGACCCTGGGGAGACTGCTCCAGAACCTGCGGTGGAGGAGTTCAGTATACAATGAGGGAATGTGACAACCCTGTCCCAAAGAATGGGGGGAAGTACTGTGAAGGCAAACGAGTGCGCTACAGGTCATGCAACATCGAGGACTGTCCAGATAATGATGGAAAAACCTTTAGAGAAGAGCAGTGTGAGGCACACAATGAATTTTCAAAAGCTTCCTTTGGGAGTGGACCTGCAGTGGAGTGGATGCCCAAGTATGCTGGCGTCTCACCAAAGGACAGATGCAAGCTCATCTGTCAGGCCAAAGGCATTGGCTACTTCTTTGTTTTACAGCCCAAGGTTGTAGATGGTACCCCATGTAGTCCAGACTCCACTTCCGTCTGTGTGCAAGGACAGTGTGTAAAGGCTGGTTGTGATCGCATCATAGATTCCAAAAAGAAGTTTGACAAATGTGGTATCTGTGGAGGAAATGGGTCTACGTGCAAGAAAATATCAGGATCAGTTACTAGTGCCAAACCTGGGTATCATGATGTTGTTACAATTCCCACTGGAGCCACAAACATCGAAGTGAAACAGCGGAATCAGAGGGGCTCCAGAGACAATGGCAGCTTTCTTGCTATCAGAGCTGCCGATGGCACCTATATCCTGAATGGCGACTTCACTTTGTCCACTTTAGAGCAAGACATTACTTACAAAGGTGTTGTGTTAAGGTACAGCGGCTCTTCCGCAGCATTGGAAAGAATTCGCAGCTTTAGCCCCCTCAAGGAGCCCCTAACCATCCAGGTTCTTACCGTGGGCAATGCACTCCGGCCCAAAATTAAATACACCTATTTTGTGAAAAAGAAGAAGGAATCGTTCAATGCTATCCCCACTTTCTCAGAATGGGTCATTGAAGAGTGGAGCGAATGTTCCAAGTCATGTGGATCGGGTTGGCAGAGAAGACTGGTAGAATGCAAAGACATTAATGGGCAGCCTGCTTCCGAGTGTGCCAAGGAGGTGAAGCCAGCCAGCACCAGACCTTGTGCAGACACACCTTGCCCACGCTGGCAGCTCGGGGACTGGTCACCGTGTTCTAAGACTTGTGGGAAGGGTTACAAAAAGAGAACCTTGAAGTGTCTGTCCCATGATGGAGGTGTGTTGTCTCATGAGAGTTGTGATCCTTTAAAGAAACCCAAGCATTATATTGACTTTTGCACGACAGCAGAGTGCAGTTAA

Related Sequences

XP_004842297.1 Protein

Adamts1 PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 1 [Heterocephalus glaber]

Length: 948 aa      View alignments
>XP_004842297.1
MGRAERPPRSPSSQPTPWLLLLLAATPVLLTVPGALGRPAEDEELVLPALERAPGQETTRLRLDAFGRQLHLELQPDHGFLAPGFTLQTVGRKPEPEAHRLDPTGDLAQCFYSGTVNGDPSSAAALSLCEGVRGAFYLQGEEFFIQPAPAAATERLTPSAAKEETQALPQFHLVRRRRRGGGGSKCGVLDAETLPARGADRDGEDAGAQRPLRDPALPRAGQPTGTGSVRKKRFVSSPRYVETMLVADQSMAEFHGSGLKHYLLTLFSVAARLYKHPSIRNSVSLVVVKILVIYEEQKGPEVTSNAAFTLRNFCNWQKQHNPPSDRDAEHYDTAILFTRQDLCGAQTCDTLGMADVGTVCDPSRSCSVIEDDGLQAAFTTAHELGHVFNMPHDDAKQCASLNVMSQDSHMMASMLSSLDRSQPWSPCSAYMITSFLDNGHGECLMDKPQNSIQLPSDLPGTLYDANRQCQFTFGEESKHCPDAASTCATLWCTGTSGGLLVCQTKHFPWADGTSCGEGKWCVNSKCVNKTDKKHFDTPVHGSWGPWGPWGDCSRTCGGGVQYTMRECDNPVPKNGGKYCEGKRVRYRSCNIEDCPDNDGKTFREEQCEAHNEFSKASFGSGPAVEWMPKYAGVSPKDRCKLICQAKGIGYFFVLQPKVVDGTPCSPDSTSVCVQGQCVKAGCDRIIDSKKKFDKCGICGGNGSTCKKISGSVTSAKPGYHDVVTIPTGATNIEVKQRNQRGSRDNGSFLAIRAADGTYILNGDFTLSTLEQDITYKGVVLRYSGSSAALERIRSFSPLKEPLTIQVLTVGNALRPKIKYTYFVKKKKESFNAIPTFSEWVIEEWSECSKSCGSGWQRRLVECKDINGQPASECAKEVKPASTRPCADTPCPRWQLGDWSPCSKTCGKGYKKRTLKCLSHDGGVLSHESCDPLKKPKHYIDFCTTAECS