Details from NCBI annotation

Gene Symbol Samsn1
Gene Name SAM domain, SH3 domain and nuclear localization signals 1, transcript variant X2
Entrez Gene ID 101712817

Database interlinks

Part of NW_004624745.1 (Scaffold)

For more information consult the page for NW_004624745.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SAMSN1 ENSCPOG00000006019 (Guinea pig)

Gene Details

SAM domain, SH3 domain and nuclear localization signals 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005433, Guinea pig)

Protein Percentage 88.03%
CDS Percentage 89.65%
Ka/Ks Ratio 0.25133 (Ka = 0.0736, Ks = 0.2927)

SAMSN1 ENSG00000155307 (Human)

Gene Details

SAM domain, SH3 domain and nuclear localization signals 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000285670, Human)

Protein Percentage 82.57%
CDS Percentage 86.15%
Ka/Ks Ratio 0.25112 (Ka = 0.1012, Ks = 0.4029)

Samsn1 ENSMUSG00000022876 (Mouse)

Gene Details

SAM domain, SH3 domain and nuclear localization signals, 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000109877, Mouse)

Protein Percentage 82.26%
CDS Percentage 83.87%
Ka/Ks Ratio 0.16292 (Ka = 0.0979, Ks = 0.6012)

Samsn1 ENSRNOG00000030930 (Rat)

Gene Details

SAM domain, SH3 domain and nuclear localization signals, 1 (Samsn1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000039751, Rat)

Protein Percentage 79.95%
CDS Percentage 81.68%
Ka/Ks Ratio 0.16567 (Ka = 0.1187, Ks = 0.7165)

Genome Location

Sequence Coding sequence

Length: 1122 bp    Location: 3022587..2978010   Strand: -
>XM_004842202.1
ATGCTGAAGAGAAAACCATCCAATGTTACAGAAAAAGAGAAACATCAAAAACCAAAGCGCAGCAGCAGTTTTGGGCATTTTGATCATTTTCGGAATAATTCCATTTCAAAACCAGATGATTCAACTGAGGTACATGAAGGGGAACTAATAAATGATAATGGAGAACAAAACAAAACTTCAAATAATGGAGGAGCTCTGAGTAAAAAAATTAGAGCTATTTCATGGACAATGAAGAAGAAAGTGGGGAAAAAGTACATCAAAGCCCTTTCTGAGGAAAAGGATAGGGAAGATGGAGAGGATGCTCTGCCATGTCGAAACAGTGATCCTATGATGGGGACCCACACAGAGAAGGTCTTGCTTAAAGCCAGTGACTCCATGGATAGTCTCTACAGTGGGCAGAGCTCATCAAGTGGAATGACAAGTTGTTCAGATGGCACAAGCAACCGAGACAGCTTTCGCCTGGATGATGACAGCCCCTACTCAGGACCACTCTGTGGCCGTGCCAGAGTACACACGGATTTTACGCCAAGTCCCTATGACACTGACTCCCTCAAAATCAAAAAAGGAGACATCATAGACATTATCTGCAAAACACCAATGGGGATATGGACGGGAATGTTGAACAATAAAGTGGGAAACTTCAAGTTTATTTATGTGGACATCATCTCAGAAGAGGAAGCAGCCCCTAAAAAAATAAAGGCACACAGAAGGAGTAAAAGCGAAAAACCTATGAGTCTTCAGGTGTTTTTAGAGAAGATTCACCTTCAGGAATATACCTCAACACTTTTACTTAATGGATATGAGATCCTAGAAGATTTAAAGGATATAAAAGAGAGTCATCTCATTGAATTAAACATTGCAAACCCAGAAGACAGAATGAGGTTACTATCAGCTGCTGAAAGTCTCCTTGATGAAGAAATTATTGAAGAAGAAGAAAATGAATCTGTGCCCCTATCCTTAAGCCCAGACCTATCCTTAAATAAGTCACAGTTAGATAACTGCCCAAGGGACTCTGGTTGTTATATCTCATCAGGAAATTCAGATAATGGCAAAGAAGATCTGGAGTCTGAAAATCTGCCTGACATGGTACAGAAGATTACTATCACAGAGTCAAGTGACTGA

Related Sequences

XP_004842259.1 Protein

Samsn1 PREDICTED: SAM domain-containing protein SAMSN-1 isoform X2 [Heterocephalus glaber]

Length: 373 aa      View alignments
>XP_004842259.1
MLKRKPSNVTEKEKHQKPKRSSSFGHFDHFRNNSISKPDDSTEVHEGELINDNGEQNKTSNNGGALSKKIRAISWTMKKKVGKKYIKALSEEKDREDGEDALPCRNSDPMMGTHTEKVLLKASDSMDSLYSGQSSSSGMTSCSDGTSNRDSFRLDDDSPYSGPLCGRARVHTDFTPSPYDTDSLKIKKGDIIDIICKTPMGIWTGMLNNKVGNFKFIYVDIISEEEAAPKKIKAHRRSKSEKPMSLQVFLEKIHLQEYTSTLLLNGYEILEDLKDIKESHLIELNIANPEDRMRLLSAAESLLDEEIIEEEENESVPLSLSPDLSLNKSQLDNCPRDSGCYISSGNSDNGKEDLESENLPDMVQKITITESSD