Sequence details NCBI ID: XM_004842131.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ttpa
Gene Name tocopherol (alpha) transfer protein, transcript variant X1
Entrez Gene ID 101723314

Database interlinks

Part of NW_004624744.1 (Scaffold)

For more information consult the page for NW_004624744.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TTPA ENSCPOG00000012876 (Guinea pig)

Gene Details

tocopherol (alpha) transfer protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011589, Guinea pig)

Protein Percentage 92.81%
CDS Percentage 91.25%
Ka/Ks Ratio 0.13918 (Ka = 0.0377, Ks = 0.2708)

TTPA ENSG00000137561 (Human)

Gene Details

tocopherol (alpha) transfer protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000260116, Human)

Protein Percentage 90.65%
CDS Percentage 88.61%
Ka/Ks Ratio 0.15105 (Ka = 0.0528, Ks = 0.3497)

Ttpa ENSMUSG00000073988 (Mouse)

Gene Details

tocopherol (alpha) transfer protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000095845, Mouse)

Protein Percentage 88.85%
CDS Percentage 86.45%
Ka/Ks Ratio 0.12775 (Ka = 0.0604, Ks = 0.473)

Ttpa ENSRNOG00000007139 (Rat)

Gene Details

tocopherol (alpha) transfer protein (Ttpa), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009611, Rat)

Protein Percentage 88.85%
CDS Percentage 86.45%
Ka/Ks Ratio 0.13658 (Ka = 0.0637, Ks = 0.4661)

Genome Location

Sequence Coding sequence

Length: 837 bp    Location: 28713708..28737181   Strand: +
Raw sequence   
>XM_004842131.1
ATGGCAGAGATGCGGCCCGGGCCCGTGACTGGGCTGCGGCTCAATGCCCTGCCGGATCACTCGCCGCTGCTGCAGCCCGGCCTGGCCGAACTCAGGCGCCGGGCCAGGGAGGCGGGCGTCCCGCTAGCGCCGCGGCCGCTCACAGACGCCTTCTTGCTGCGGTTCTTGCGCGCCCGGGATTTCGACCTGAACCTGGCCTGGCGGTTATTAAAAAACTATTATAAATGGAGAGTCGAATGTCCAGAATTAAGTGCGGATCTACACCCTAGAAGTATTCTTGGTCTTTTGAAGGCTGGGTACCATGGAGTTCTAGGATCCAGGGATCCCACTGGTAGCAGAGTTCTTATTTACAGAATCGCATTTTGGGACCCAAAACTGTTTACAGCTTATGATGTATTTCGTGTGAGTCTAATTACATCCGAGCTTATTGTACGGGAAGTAGAAACTCAACGGAATGGAGTCAAGGCTATATTTGATCTGGAAGGCTGGGAGTTTTCTCATGCTTTACAAATTACTCCATTTGTAGCCAAGAAGATTGCTGCTGTACTTACAGATTCCTTTCCACTGAAAGTTCGTGGTATCCATTTGATAAATGAACCAGTAATTTTCCATGCTGTATTTTCCATGATTAAACCATTCCTGACTGAAAAAATTAAGGAAAGGATTCATATGCATGGGAATAATTACAAACAAAGCTTACTTCAGCATTTCCCTGATATTCTTCCATTGGAGTATGGCGGTGAAGAATTCTCCATGGAGGACATCTGTCAGGAGTGGATAAATTTTATAATGAAGTCTGAAGATTATCTCAGCAGCATTTCTGGGACCATTCAATGA

Related Sequences

XP_004842188.1 Protein

Ttpa PREDICTED: alpha-tocopherol transfer protein isoform X1 [Heterocephalus glaber]

Length: 278 aa      View alignments
>XP_004842188.1
MAEMRPGPVTGLRLNALPDHSPLLQPGLAELRRRAREAGVPLAPRPLTDAFLLRFLRARDFDLNLAWRLLKNYYKWRVECPELSADLHPRSILGLLKAGYHGVLGSRDPTGSRVLIYRIAFWDPKLFTAYDVFRVSLITSELIVREVETQRNGVKAIFDLEGWEFSHALQITPFVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDILPLEYGGEEFSMEDICQEWINFIMKSEDYLSSISGTIQ