Sequence details NCBI ID: XM_004842124.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Armc1
Gene Name armadillo repeat containing 1
Entrez Gene ID 101720620

Database interlinks

Part of NW_004624744.1 (Scaffold)

For more information consult the page for NW_004624744.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ARMC1 ENSCPOG00000001150 (Guinea pig)

Gene Details

armadillo repeat containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001037, Guinea pig)

Protein Percentage 98.58%
CDS Percentage 94.09%
Ka/Ks Ratio 0.02434 (Ka = 0.0064, Ks = 0.2627)

ARMC1 ENSG00000104442 (Human)

Gene Details

armadillo repeat containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000276569, Human)

Protein Percentage 97.16%
CDS Percentage 92.67%
Ka/Ks Ratio 0.04484 (Ka = 0.0133, Ks = 0.2974)

Armc1 ENSMUSG00000027599 (Mouse)

Gene Details

armadillo repeat containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029125, Mouse)

Protein Percentage 97.52%
CDS Percentage 89.83%
Ka/Ks Ratio 0.02498 (Ka = 0.0118, Ks = 0.4743)

Armc1 ENSRNOG00000013253 (Rat)

Gene Details

armadillo repeat containing 1 (Armc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018547, Rat)

Protein Percentage 98.21%
CDS Percentage 91.07%
Ka/Ks Ratio 0.018 (Ka = 0.0082, Ks = 0.4534)

Genome Location

Sequence Coding sequence

Length: 849 bp    Location: 25885446..25917282   Strand: +
Raw sequence   
>XM_004842124.1
ATGAATTCTTCCTCCTCCACGATGAATGAAGAACCTGATGCTCTGTCAGTAGTTAACCAGCTTCGGGATCTAGCAGCAGATCCATTAAATAGAAGAGCTATTGTCCAGGATCAAGGATGTCTGCCTGGCCTTATTTTATTTATGGACCATCCCAACCCCTCTGTTGTCCACTCAGCTTTGCTTGCTCTTCGTTACTTGGCAGAATGTCGTGTGAACAGGGAAAAGATGAAAGGAGAATTGGGTATGATGTTAAGCTTGCAAAATGTTATACAAAAGACTACAACTCCAGGAGAAACAAAACTTCTGGCCTCTGAAGTCTATGACATTCTTCAGTCTTCCAGTATGGCAGATGGTGATAGTTTTAATGAAATGAATTCACGTCGGAGGAAAGCTCAATTTTTTCTAGGAACTACAAACAAACGTGCCAAAACGGTGGTTTTGCACATAGATGGTCTTGATGATACGTCTCGGAGAAATCTATGTGAAGAGGCTTTGTTAAAAATCAAAGGTGTTATTAGCTTTACTTTTCAAATGGCTGTTCAAAGATGTGTGGTACGAATCCGTTCAGATTTGAAAGCAGAGGCATTGGCATCAGCAATAGCATCAACCAAGGTCATGAAAGCCCAGCAAGTTGTGAAAAGTGAAAGTGGAGAAGAGATGCTGGTCCCATTCCAAGATACTCCTGTGGAAGTAGAAGAGAACACAGAGCTGCCTGACTACTTGCCTGAGGATGAGAGTCCCACAAAGGAGCAGGACAAAGCAGTGTCTCGGGTTGGCTCCCATCCTGAAGGTGGAGCTGGCTGGCTGAGCACAGCAGCAAACTTTTTATCCAGATCATTTTACTGGTGA

Related Sequences

XP_004842181.1 Protein

Armc1 PREDICTED: armadillo repeat-containing protein 1 [Heterocephalus glaber]

Length: 282 aa      View alignments
>XP_004842181.1
MNSSSSTMNEEPDALSVVNQLRDLAADPLNRRAIVQDQGCLPGLILFMDHPNPSVVHSALLALRYLAECRVNREKMKGELGMMLSLQNVIQKTTTPGETKLLASEVYDILQSSSMADGDSFNEMNSRRRKAQFFLGTTNKRAKTVVLHIDGLDDTSRRNLCEEALLKIKGVISFTFQMAVQRCVVRIRSDLKAEALASAIASTKVMKAQQVVKSESGEEMLVPFQDTPVEVEENTELPDYLPEDESPTKEQDKAVSRVGSHPEGGAGWLSTAANFLSRSFYW