Details from NCBI annotation

Gene Symbol Jph1
Gene Name junctophilin 1, transcript variant X2
Entrez Gene ID 101721322

Database interlinks

Part of NW_004624744.1 (Scaffold)

For more information consult the page for NW_004624744.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

JPH1 ENSCPOG00000002273 (Guinea pig)

Gene Details

junctophilin 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002064, Guinea pig)

Protein Percentage 96.49%
CDS Percentage 94.04%
Ka/Ks Ratio 0.0876 (Ka = 0.0186, Ks = 0.212)

JPH1 ENSG00000104369 (Human)

Gene Details

junctophilin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000344488, Human)

Protein Percentage 95.59%
CDS Percentage 92.55%
Ka/Ks Ratio 0.07222 (Ka = 0.0214, Ks = 0.297)

Jph1 ENSMUSG00000042686 (Mouse)

Gene Details

junctophilin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000039072, Mouse)

Protein Percentage 93.31%
CDS Percentage 89.31%
Ka/Ks Ratio 0.08383 (Ka = 0.0365, Ks = 0.4358)

Jph1 ENSRNOG00000006110 (Rat)

Gene Details

junctophilin 1 (Jph1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008153, Rat)

Protein Percentage 93.16%
CDS Percentage 89.26%
Ka/Ks Ratio 0.08942 (Ka = 0.0384, Ks = 0.429)

Genome Location

Sequence Coding sequence

Length: 1980 bp    Location: 16937293..17012250   Strand: +
>XM_004842043.1
ATGACGGGCGGAAGGTTCGACTTCGACGATGGCGGCACCTACTGCGGCGGCTGGGAGGAGGGCAAGGCGCACGGGCATGGCATCTGCACGGGGCCCAAGGGCCAGGGCGAGTACTCTGGCTCCTGGTCGCACGGCTTCGAGGTGGTCGGAGGCTACACCTGGCCCAGCGGCAACACCTACCAGGGCTACTGGGCGCAGGGCAAGAGGCACGGGCTGGGGGTGGAGACGAAGGGCAAGTGGATGTACCGGGGGGAGTGGTCCCATGGTTTTAAGGGGCGCTACGGGGTCCGGCAGAGCCTGTGCACCCCCGCCCGCTACGAGGGTACCTGGAGTAACGGGCTGCAGGACGGGTACGGCGTGGAGACCTACGGGGACGGAGGTACCTACCAGGGCCAGTGGGCCGGAGGCATGCGGCACGGCTACGGCGTGCGCCAGAGCGTGCCCTACGGCATGGCCACCGTGATCCGCTCGCCCCTGCGCACTTCCCTGGCTTCGCTGCGCAGTGAGCAGAGCAACGGCAGCGTCCTGCACGACGCCGCGGCCGCCGCCGACAGCCCGGCCGGCACCCGCGGAGGCTTCGTGCTCAATTTCCACGCAGACGCCGAGCTCTCGGGCAAGAAGAAGGGCGGCCTCTTCCGCAGGGGCTCCCTCCTGGGAAGCATGAAACTCCGCAAGTCCGAATCCAAGTCTTCCATCTCCAGCAAGCGCAGCTCGGTCCGCAGCGACGCGGCCATGAGTAGAATTAGCTCCAGCGATGCCAACTCCACCATCAGCTTCGGCGACGTCGACTGTGATTTTTGCCCCGTGGAAGACCACGTGGACGCCACCACCACGGAGACCTACATGGGCGAGTGGAAGAACGACAAACGCAATGGTTTCGGCATCAGCGAGCGCTCCAACGGCATGAAGTACGAAGGCGAGTGGGCAAATAACAAGAGGCACGGATATGGCTGCACTGTGTTTCCTGATGGCTCCAAAGAAGAAGGAAAATACAAAAATAATGTTCTGGTCCGTGGAATAAGGAAGCAGCTTATACCAATAAGAAATACAAAAACTAGGGAGAAGGTGGACAGAGCAATTGAAGGCGCGCAAAGGGCAGCCGCCATGGCGAGAACCAAAGTGGAAATAGCCAACTCAAGGACTGCACATGCAAGAGCGAAGGCTGACGCTGCTGACCAGGCTGCTTTGGCTGCCCGCCAGGAGTGCGACATTGCGAGGGCTGTAGCTAGGGAGCTGTCACCCGATTTCTACCAGCCAGGCCCTGATTACATCAAACAGAGATTTCAAGAAGGTGTAGATGCTAAAGAAAATCCAGAAGAAAAGGTACAGGAAAAGCTACCTACACCAAAGGAATCTCCTCATTTTTATCGAAAAGGCACAACCCCCCCTGCGTCTCCTGAGGCGAGTCCCAAACAGAGCCACTCTCCCAAGCCTTCCTCTCCAAAGCCCCTGAGGAAGCAAAACCCCAGCTCGGGGGCAAGACTCAATCAAGACAGAAGGAGTGTGCCCGAAGAGCAAGTCACAGCTGTTGTCAATAAGCCCTTGATGTCGAAGGCCCCCTCAAAGGAAACAGTACCCCAGTCCAAGTACTCTGGCCGCCACCATGTCCCCAGTCCCAGTAATGGGGAGCTACATTCTCAGTATCACGGCTACTATGTGAAACTGAACGCCCCCCAGCATCCTCCGGAAGACGCAGAGGACAATGATGGATCAAGCCAGGCTTCCTCAGCACTGGTGCACAAGCCATCGCCTAACAAGTGGAGTTCCCCTAAATCTGTGACAAAACCAGTTGCCAAAGAAAGCAAAGCTGAGCCAAAAGCTAAGAAGTCTGAACTTGCTATACCAAAGAATCCAGCAAGCAACGATTCGTGCCCTTCTTCAGAAAAAGAAGCCAATTCAGGCCCCAATTCAGTCATGATTGTCCTTGTCATGTTGTTGAATATCGGGTTGGCCATTCTTTTTGTCCACTTCCTAACTTGA

Related Sequences

XP_004842100.1 Protein

Jph1 PREDICTED: junctophilin-1 isoform X2 [Heterocephalus glaber]

Length: 659 aa      View alignments
>XP_004842100.1
MTGGRFDFDDGGTYCGGWEEGKAHGHGICTGPKGQGEYSGSWSHGFEVVGGYTWPSGNTYQGYWAQGKRHGLGVETKGKWMYRGEWSHGFKGRYGVRQSLCTPARYEGTWSNGLQDGYGVETYGDGGTYQGQWAGGMRHGYGVRQSVPYGMATVIRSPLRTSLASLRSEQSNGSVLHDAAAAADSPAGTRGGFVLNFHADAELSGKKKGGLFRRGSLLGSMKLRKSESKSSISSKRSSVRSDAAMSRISSSDANSTISFGDVDCDFCPVEDHVDATTTETYMGEWKNDKRNGFGISERSNGMKYEGEWANNKRHGYGCTVFPDGSKEEGKYKNNVLVRGIRKQLIPIRNTKTREKVDRAIEGAQRAAAMARTKVEIANSRTAHARAKADAADQAALAARQECDIARAVARELSPDFYQPGPDYIKQRFQEGVDAKENPEEKVQEKLPTPKESPHFYRKGTTPPASPEASPKQSHSPKPSSPKPLRKQNPSSGARLNQDRRSVPEEQVTAVVNKPLMSKAPSKETVPQSKYSGRHHVPSPSNGELHSQYHGYYVKLNAPQHPPEDAEDNDGSSQASSALVHKPSPNKWSSPKSVTKPVAKESKAEPKAKKSELAIPKNPASNDSCPSSEKEANSGPNSVMIVLVMLLNIGLAILFVHFLT