Details from NCBI annotation

Gene Symbol Snx16
Gene Name sorting nexin 16, transcript variant X2
Entrez Gene ID 101703205

Database interlinks

Part of NW_004624744.1 (Scaffold)

For more information consult the page for NW_004624744.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SNX16 ENSCPOG00000013718 (Guinea pig)

Gene Details

sorting nexin 16

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012355, Guinea pig)

Protein Percentage 94.77%
CDS Percentage 93.51%
Ka/Ks Ratio 0.10322 (Ka = 0.024, Ks = 0.2324)

SNX16 ENSG00000104497 (Human)

Gene Details

sorting nexin 16

External Links

Gene Match (Ensembl Protein ID: ENSP00000379621, Human)

Protein Percentage 91.57%
CDS Percentage 91.76%
Ka/Ks Ratio 0.16392 (Ka = 0.0436, Ks = 0.2659)

Snx16 ENSMUSG00000027534 (Mouse)

Gene Details

sorting nexin 16

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029047, Mouse)

Protein Percentage 83.43%
CDS Percentage 84.79%
Ka/Ks Ratio 0.1581 (Ka = 0.0868, Ks = 0.5491)

Snx16 ENSRNOG00000009953 (Rat)

Gene Details

sorting nexin 16 (Snx16), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000041690, Rat)

Protein Percentage 84.01%
CDS Percentage 85.76%
Ka/Ks Ratio 0.15149 (Ka = 0.0794, Ks = 0.5239)

Genome Location

Sequence Coding sequence

Length: 1035 bp    Location: 9654332..9696984   Strand: +
>XM_004841993.1
ATGGCAACTCCTTATGTCCCAGTTCCTATGCCCATAGGAAACTCTGCTTCTAGTTTTACAGCCAACAAAAGTCAAAGAAGTTCTTCTTTTGGCAGCATCTCAACAAGCTCAAACTCCTCCAAAGGCCAGTTAGAAGATTCAAATATGGGTAATTGTAAACAGACAAGTGTTCCTGATCAGCTGGATAGAACTTCATCTGTCAGTAGCAGTCCTCTCATTAGGACTAAGTTTACAGGTACAGAATCATCTATTGAGTATTCTACTAGACCAAGAGAAACTGAAGAACAAAATCCTGAAGCAGTGAATTGGGAGGATAGACCATCTACACCTACTATACTGGGTTATGAGGTGATGGAAGAAAGAGCCAAATTTACTGTATATAAAATACTAGTAAAGAAAACCCCAGAAGAAAGCTGGGTAGTTTTCAGAAGATACACTGACTTCTCTAGGCTTAATGACAAATTAAAAGAGATGTTTCCAGGCTTTCGATTAGCACTTCCACCAAAACGCTGGTTTAGAAATAATTACAACGCTGATTTTTTAGAAGATAGACAATTAGGATTGCAAGCGTTTCTTCAAAATTTAGTAGCTCACAAGGACATTGCTAACTGCCTTGCAGTGAGAGAATTTCTTTGTCTGGATGATCCACCGGGTCCATTTGATAGCCTAGAAGAAAGCAGGGCTTTCTGTGAAACTTTAGAAGAGACAAACTACCATCTACAGAGAGAACTACTTGAAAAACAAAAAGAGGTAGAATCCCTGAAGAAACTGCTTAGTGAGAAACAACTTCACATAGACACTTTAGAGAACAGAATCAGAACATTGTCTGTAGAACCTGAAGAATCATTTTATGTATCTGAAACAGAAAATGGACAGATCCTAAGGGTAGAGTCCTCTGCACTCAAAATTGACCAAGACGTCTTGGACGAAGAATCTAGAGCTGATAATAAGCCACACCTAAGTTTTAGTGACCCTGAAAATGCTATATCAGAAGTGGAGGTGGCAGAAGTGGCATATAATGCTGAGGAAGACTAA

Related Sequences

XP_004842050.1 Protein

Snx16 PREDICTED: sorting nexin-16 isoform X2 [Heterocephalus glaber]

Length: 344 aa      View alignments
>XP_004842050.1
MATPYVPVPMPIGNSASSFTANKSQRSSSFGSISTSSNSSKGQLEDSNMGNCKQTSVPDQLDRTSSVSSSPLIRTKFTGTESSIEYSTRPRETEEQNPEAVNWEDRPSTPTILGYEVMEERAKFTVYKILVKKTPEESWVVFRRYTDFSRLNDKLKEMFPGFRLALPPKRWFRNNYNADFLEDRQLGLQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEETNYHLQRELLEKQKEVESLKKLLSEKQLHIDTLENRIRTLSVEPEESFYVSETENGQILRVESSALKIDQDVLDEESRADNKPHLSFSDPENAISEVEVAEVAYNAEED