Sequence details NCBI ID: XM_004841953.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tmem55a
Gene Name transmembrane protein 55A, transcript variant X1
Entrez Gene ID 101718072

Database interlinks

Part of NW_004624744.1 (Scaffold)

For more information consult the page for NW_004624744.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMEM55A ENSCPOG00000006825 (Guinea pig)

Gene Details

transmembrane protein 55A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006152, Guinea pig)

Protein Percentage 96.89%
CDS Percentage 94.03%
Ka/Ks Ratio 0.07535 (Ka = 0.0151, Ks = 0.2005)

TMEM55A ENSG00000155099 (Human)

Gene Details

transmembrane protein 55A

External Links

Gene Match (Ensembl Protein ID: ENSP00000285419, Human)

Protein Percentage 96.5%
CDS Percentage 93.77%
Ka/Ks Ratio 0.08051 (Ka = 0.0169, Ks = 0.2095)

Tmem55a ENSMUSG00000028221 (Mouse)

Gene Details

transmembrane protein 55A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029875, Mouse)

Protein Percentage 94.55%
CDS Percentage 89.11%
Ka/Ks Ratio 0.06342 (Ka = 0.0268, Ks = 0.4218)

Tmem55a ENSRNOG00000006697 (Rat)

Gene Details

transmembrane protein 55A (Tmem55a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009375, Rat)

Protein Percentage 94.94%
CDS Percentage 88.85%
Ka/Ks Ratio 0.05412 (Ka = 0.0246, Ks = 0.4541)

Genome Location

Sequence Coding sequence

Length: 774 bp    Location: 924231..977377   Strand: +
Raw sequence   
>XM_004841953.1
ATGGCTGCTGATGGGGTGGACGAACGCTCGCCCCTGCTGTCGGCAGCCCACTCGGGGAATGTCACTCCCACTGCTCCGCCGTACTTGCAAGAAAGCAGCCCCAGAGCAGAACTCCCACCTCCATATACAGCTATTGCCAGTCCAGATGCCAGTGGTATTCCTGTAATCAACTGCCGCGTGTGCCAATCTCTAATCAATTTGGATGGCAAACTTCACCAACATGTGGTTAAATGCACGGTTTGCAATGAAGCTACGCCAATCAAAAACCCCCCAACAGGGAAGAAATATGTTAGATGCCCTTGTAATTGTCTCCTCATTTGTAAGGACACATCTCGGCGAATAGGATGTCCGAGACCTAACTGTAGACGCATAATTAACCTTGGTCCAGTAATGCTTATTTCTGAAGAACAACCAGCTCAGCCTGCATTGCCAGTCCAACCAGAAGGTACAAGGGTCGTGTGTGGGCACTGTGGAAACACATTCCTGTGGATGGAACTGAGGTTCAACACTCTGGCAAAGTGCCCACACTGCAAAAAAATTTCTTCAGTGGGTAGTGCACTTCCACGAAGGCGCTGCTGTGCATACATTACCATTGGAATGATAAGTATTTTCATTGGAGTTGGATTAACTGTTGGCACCCAAGATTTTGCAAGACAATTTCATGCAACCTACATTTCTTGGGCCATTGCTTATTTCTTAGGTTTGATCTGCCTTATCCGAGCTTGTTACTGGGGAGCCATAAGAGTCAGTTATCCAGAACACAGTTTTACATAA

Related Sequences

XP_004842010.1 Protein

Tmem55a PREDICTED: transmembrane protein 55A isoform X1 [Heterocephalus glaber]

Length: 257 aa      View alignments
>XP_004842010.1
MAADGVDERSPLLSAAHSGNVTPTAPPYLQESSPRAELPPPYTAIASPDASGIPVINCRVCQSLINLDGKLHQHVVKCTVCNEATPIKNPPTGKKYVRCPCNCLLICKDTSRRIGCPRPNCRRIINLGPVMLISEEQPAQPALPVQPEGTRVVCGHCGNTFLWMELRFNTLAKCPHCKKISSVGSALPRRRCCAYITIGMISIFIGVGLTVGTQDFARQFHATYISWAIAYFLGLICLIRACYWGAIRVSYPEHSFT