Details from NCBI annotation

Gene Symbol Tmco6
Gene Name transmembrane and coiled-coil domains 6, transcript variant X3
Entrez Gene ID 101709802

Database interlinks

Part of NW_004624743.1 (Scaffold)

For more information consult the page for NW_004624743.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMCO6 ENSCPOG00000009172 (Guinea pig)

Gene Details

transmembrane and coiled-coil domains 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008235, Guinea pig)

Protein Percentage 90.24%
CDS Percentage 90.51%
Ka/Ks Ratio 0.26038 (Ka = 0.0575, Ks = 0.2207)

TMCO6 ENSG00000113119 (Human)

Gene Details

transmembrane and coiled-coil domains 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000378166, Human)

Protein Percentage 84.35%
CDS Percentage 86.18%
Ka/Ks Ratio 0.28245 (Ka = 0.0972, Ks = 0.3441)

Tmco6 ENSMUSG00000006850 (Mouse)

Gene Details

transmembrane and coiled-coil domains 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000007046, Mouse)

Protein Percentage 83.54%
CDS Percentage 84.42%
Ka/Ks Ratio 0.23854 (Ka = 0.1031, Ks = 0.4322)

Tmco6 ENSRNOG00000017718 (Rat)

Gene Details

transmembrane and coiled-coil domains 6 (Tmco6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000038714, Rat)

Protein Percentage 84.55%
CDS Percentage 84.69%
Ka/Ks Ratio 0.21783 (Ka = 0.0959, Ks = 0.44)

Genome Location

Sequence Coding sequence

Length: 1503 bp    Location: 33383057..33397956   Strand: +
>XM_004841896.1
ATGTGGAGTCGGCGGCAAAGCCACCTCAGACGGGTGGCCTGCGGGGTGGAGGAGCTGCGGTGCCGCCGGCGGGAGCAGGAGGCCGCACTGCGGAAGGCGCGGAGGGAGCAGCAACTGGTCAGCAAGAGGCTGCTGAGAGAATCTCCAGAGGAAGCCGCTGGGGAAGGTGCGGCCGCCGTTCTCGGGGAAGCCGAGATCCAGCAGTTCCTCCGACTGGCCCAGCGGGGAACGGATGAAAAAGAGAGAGAGAAGGCTCTGGTCAGCCTTCGTCGAGGCTTGCAGCACCTTGAGACACAGCAAACCTTCATCTGGATGGAGGGCAGTATGCGGATCCTGGTTGGGCTCCTGACCTGCAACCGGGCCCTGTTGCAGCTTGAGGCGGCTCGGTGTCTTCATGAACTCTCTCATTCTGAGCAGTCTGCGGTGGCTGAAGCCTGCCTGCCAGCTACTTCCTACCTCCTCATCTATCTCTCCGGTCACAGTTCAGACTTCATAGAGCTGTGTCTCTATACACTGGGGAACTTGATTGTGGAGAGTGAGGCTGTGAGAAGGCACCTCCTGCCACAGGGCATTGTTCCAGCTTTGGCCTCCTGCATTCAGTCCCCCCATGTGGCTGTGCTGGAAGCTGTCGGATACACCTTGTCCCAGCTTCTGCAGGCTAAGGAAGCTCCAGAGAAGATCATTCCCCATATCCTGGATTCTACTCTGCTCCAGCACATGTTACAATTGATGCAACCAGGCCCAAAGCTGAACCCTGGGGTTGCTGTGGAGTTTGCATGGTCCCTTCACTATATCATCTGCAGCCAGGTCAACAATGCCCTCCTTATCACTCATGGGGCTCTGTCTACTCTGGTGCTGCTGCTGTTGGACTTGGCTGAGGTGGTCCAGAGAACGGAGGATGTGGGACTGGAGCTGCTTGCATGCCCTGTGATTCGGTGTCTAAGCAACCTGCTAGCAGAGGTGGCCACAGAGGATGTGGGAGGGCAAATGGAGCTCAGAGATGAACGTATTGTGGCAGCCTTATTTATCCTACTTGAGTTCTTCCTTCAGAAACAGCCCAGCCTGCTTCCTGAGGGCCTCTGGCTCCTCAACAATCTCACTGCAAACAGTCCTACTTTGTGTACTTCTTTGCTCTCTCTGGACCTGATTGAACCCCTCTTACAGCTGTTGTCACTATCTAACGTGGTGACCGTACTGGATTGTATATATGTCTCTCTGCAGGTGCTCACAGTTCTGTGCAATGTTGCAGAGAAAGGTCCAGCTTACTGCCAGCAGCTGTGGCCAGGGCCCCTGCTTCCCTGCTTGCTAAACACAGTGGCCCTGTCAGATACTGATGTAGTAGGCCAGAGTTTGGAGCTGCTACAGCTGCTGTTCCTCTATCAGCCAGAGGCTGCCCAGGCCTTCTTGCAGCTATCTGGGCTGCAGGCCTTGGAAAGGCATCAGGAGGAAGTCCAGCTTCAGGATCGAGTGCATGCTGTCCAGCAGACAGCTCTTCATTGCTGA

Related Sequences

XP_004841953.1 Protein

Tmco6 PREDICTED: transmembrane and coiled-coil domain-containing protein 6 isoform X3 [Heterocephalus glaber]

Length: 500 aa      View alignments
>XP_004841953.1
MWSRRQSHLRRVACGVEELRCRRREQEAALRKARREQQLVSKRLLRESPEEAAGEGAAAVLGEAEIQQFLRLAQRGTDEKEREKALVSLRRGLQHLETQQTFIWMEGSMRILVGLLTCNRALLQLEAARCLHELSHSEQSAVAEACLPATSYLLIYLSGHSSDFIELCLYTLGNLIVESEAVRRHLLPQGIVPALASCIQSPHVAVLEAVGYTLSQLLQAKEAPEKIIPHILDSTLLQHMLQLMQPGPKLNPGVAVEFAWSLHYIICSQVNNALLITHGALSTLVLLLLDLAEVVQRTEDVGLELLACPVIRCLSNLLAEVATEDVGGQMELRDERIVAALFILLEFFLQKQPSLLPEGLWLLNNLTANSPTLCTSLLSLDLIEPLLQLLSLSNVVTVLDCIYVSLQVLTVLCNVAEKGPAYCQQLWPGPLLPCLLNTVALSDTDVVGQSLELLQLLFLYQPEAAQAFLQLSGLQALERHQEEVQLQDRVHAVQQTALHC