Sequence details NCBI ID: XM_004841852.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Psd2
Gene Name pleckstrin and Sec7 domain containing 2, transcript variant X2
Entrez Gene ID 101726346

Database interlinks

Part of NW_004624743.1 (Scaffold)

For more information consult the page for NW_004624743.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PSD2 ENSCPOG00000000154 (Guinea pig)

Gene Details

pleckstrin and Sec7 domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000134, Guinea pig)

Protein Percentage 91.93%
CDS Percentage 91.32%
Ka/Ks Ratio 0.15681 (Ka = 0.0435, Ks = 0.2776)

PSD2 ENSG00000146005 (Human)

Gene Details

pleckstrin and Sec7 domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000274710, Human)

Protein Percentage 89.21%
CDS Percentage 88.34%
Ka/Ks Ratio 0.13131 (Ka = 0.0574, Ks = 0.4372)

Psd2 ENSMUSG00000024347 (Mouse)

Gene Details

pleckstrin and Sec7 domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000111381, Mouse)

Protein Percentage 88.61%
CDS Percentage 85.56%
Ka/Ks Ratio 0.11578 (Ka = 0.0673, Ks = 0.5813)

Psd2 ENSRNOG00000019177 (Rat)

Gene Details

pleckstrin and Sec7 domain containing 2 (Psd2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026112, Rat)

Protein Percentage 88.38%
CDS Percentage 85.9%
Ka/Ks Ratio 0.11815 (Ka = 0.0664, Ks = 0.5617)

Genome Location

Sequence Coding sequence

Length: 2313 bp    Location: 32573296..32616870   Strand: +
Raw sequence   
>XM_004841852.1
ATGGATGAATACAAGCTTCCATCTGCACTGTCTGAAGAGGACAGTGCCACCTGGGGCCCCAGCCTGGAGCCTGAGGAGGAGCCTGGGGCCCAGAATGGAATGGCAGCCAGTGAGGGTCTGAGCAGCCTCCTCAGCAGCCCAGCGCATGAGAAAAAGGACACCCTGTTGGACCCTGAGGAGTCCACAGAGGCCCAAGGTGAGGCCCTCACCGGCCTCAGCCTCAGCTTTTCCCTCACCAATGGCCTAACCCTGGGACCAGAGACAAACATTCTGGAAAATTCAACAGAGTCCAGTTCCTGGAGGGCTTGTGCACTGGCAGAGGGGGATGATGTCTCCAGCAGGCTCTGTCCAGACACTGAGGACCCTCAGCTGGGGCTGGATGGCCCTGGGGAGCCAGATGTGCGGGACGGCTTCAGTGCCACGTTTGAGAAGATTCTGGAGTCAGAGCTGCTGCACGGCACCCAGTACAGCAGCCTGGACTCCTTGGACGTACTGAGCCTCACTGATGAGAGTGACAGCTGTGTCAGCTTCGAGGCCCCACTCACTCCCCTCATCCAGCAGCGGGCCCGGGATAGCCCCGAGCCAGGGGCTGGGCTGGGCACTGGAGACCTGGGGCCTGAGGGAGACCTGGGGGCAGCTGGAGGTGAGCAGGAGCTGGGCAGCCCCCTGCGATGCTCCATCTCTAGCAGCCGCTCAGAGAATGTCCTGAGCCGCTTGTCTCTTATGACCATGCCCAATGGATTTCATGAGGATGGGCCCCAGGGCTCAGGGGGGGACGAGGACGATGATGACGAGGACACGGACAAATTGCTGAACTCAGCCAGTGATCCCAGCCTGAAGGATGGCCTGTCGGACTCGGACTCAGAGCTGAGCAGCTCAGAGGGGCTGGAGCCTGGCAACACAGACCCTCTGGCCAATGGGTGCCAGGGCGTCAATGAAGCTGCTCGACGGCTGGCCCGCCGCCTCTACCACCTTGAAGGCTTCCAGCGCTGTGACGTGGCCCGGCAGCTAGGCAAGAACAATGAGTTCAGCAGGCTGGTGGCTGGCGAGTACCTCAGTTTCTTTGACTTCTCCGGCCTCACTTTGGACCGAGCGCTCAGAACCTTCCTGAAGGCCTTTCCGCTGATGGGGGAGACGCAGGAGCGTGAGCGGGTCCTTACACATTTCTCCCACCGGTACTGCCAGTGCAACCCTGATGACAGCACCTCAGAAGATGGGATCCACACGCTCACTTGTGCCCTGATGCTGCTCAACACGGACCTGCACGGACATAACATTGGCAAGAAGATGTCCTGTCAGCAGTTCATTGCCAACCTGGACCAGCTGAATGATGGCCAAGACTTTTCCAAAGACCTCCTGAAGACCCTTTACAACTCCATCAAGAATGAAAAGCTGGAATGGGCTATTGATGAGGATGAGCTGAGGAAATCCCTGTCTGAGCTGGTGGATGACAAGTTTGGGACAGGCACAAAGAAGGTGACACGGATCCTCGATGGTGGCAACCCCTTCCTGGATGTCCCTCAGGCTCTCAGTGCTACCACCTACAAGCATGGTGTGCTGACTCGGAAGACTCATGCTGACATGGATGGCAAGAGGACACCCCGTGGGAAGCGTGGCTGGAAGAAATTCTACGCGGTGCTCAAGGGGACCATCCTGTACCTGCAGAAGGATGAGTACAGGCCTGACAAAGCTCTGTCAGAGGGTGACCTGAAGAATGCCATTCGGGTGCATCATGCTCTGGCCACCAAGGCCTCTGACTACAGCAAGAAGTCCAATGTGCTCAAGCTGAAGACTGCTGACTGGAGGGTCTTCCTCTTCCAGGCCCCGAGCAAGGAAGAAATGCTGTCCTGGATCCTGAGGATCAACCTGGTGGCTACCATCTTTTCAGCCCCAGCCTTCCCAGCTGCTGTCAACTCCATGAAGAAGTTCTGTCGGCCCCTGCTGCCCTCCTGCGCCACTCGTCTTTGCCAGGAGGAGCAGTTGCGGTCTCATGAGAATAAGTTGAGGCAGGTGACTGCCGAGCTGGCCGAGCACAGGTGTCACCCAGTGGAGAGGGGCCTCAAGTCCAAGGAGGCGGAGGAGTACCGGCTGAAGGAGCACTATCTCACGTTTGAGAAAAGTCGTTATGAGACCTACATCCATCTTCTGGCTGTGAAAATCAAAGTGGGCTCAGATGATCTGGAGCGGATTGAGGCTCGCCTGGCCACCCTAGAAGGGGATGATCCTTCTCTCCGGAAGACACACTCGAGCCCTGCCCTCAGCCAGGGGCATGGGCCTATGACTTGCAGCAAAGCCACTGGGGCTGATACTTAA

Related Sequences

XP_004841909.1 Protein

Psd2 PREDICTED: PH and SEC7 domain-containing protein 2 isoform X2 [Heterocephalus glaber]

Length: 770 aa      View alignments
>XP_004841909.1
MDEYKLPSALSEEDSATWGPSLEPEEEPGAQNGMAASEGLSSLLSSPAHEKKDTLLDPEESTEAQGEALTGLSLSFSLTNGLTLGPETNILENSTESSSWRACALAEGDDVSSRLCPDTEDPQLGLDGPGEPDVRDGFSATFEKILESELLHGTQYSSLDSLDVLSLTDESDSCVSFEAPLTPLIQQRARDSPEPGAGLGTGDLGPEGDLGAAGGEQELGSPLRCSISSSRSENVLSRLSLMTMPNGFHEDGPQGSGGDEDDDDEDTDKLLNSASDPSLKDGLSDSDSELSSSEGLEPGNTDPLANGCQGVNEAARRLARRLYHLEGFQRCDVARQLGKNNEFSRLVAGEYLSFFDFSGLTLDRALRTFLKAFPLMGETQERERVLTHFSHRYCQCNPDDSTSEDGIHTLTCALMLLNTDLHGHNIGKKMSCQQFIANLDQLNDGQDFSKDLLKTLYNSIKNEKLEWAIDEDELRKSLSELVDDKFGTGTKKVTRILDGGNPFLDVPQALSATTYKHGVLTRKTHADMDGKRTPRGKRGWKKFYAVLKGTILYLQKDEYRPDKALSEGDLKNAIRVHHALATKASDYSKKSNVLKLKTADWRVFLFQAPSKEEMLSWILRINLVATIFSAPAFPAAVNSMKKFCRPLLPSCATRLCQEEQLRSHENKLRQVTAELAEHRCHPVERGLKSKEAEEYRLKEHYLTFEKSRYETYIHLLAVKIKVGSDDLERIEARLATLEGDDPSLRKTHSSPALSQGHGPMTCSKATGADT