Sequence details NCBI ID: XM_004841850.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Cxxc5
Gene Name CXXC finger protein 5, transcript variant X6
Entrez Gene ID 101724740

Database interlinks

Part of NW_004624743.1 (Scaffold)

For more information consult the page for NW_004624743.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CXXC5 ENSCPOG00000001156 (Guinea pig)

Gene Details

CXXC finger protein 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001043, Guinea pig)

Protein Percentage 96.53%
CDS Percentage 93.8%
Ka/Ks Ratio 0.0691 (Ka = 0.0162, Ks = 0.234)

CXXC5 ENSG00000171604 (Human)

Gene Details

CXXC finger protein 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000302543, Human)

Protein Percentage 93.44%
CDS Percentage 91.67%
Ka/Ks Ratio 0.1304 (Ka = 0.0358, Ks = 0.2744)

Cxxc5 ENSMUSG00000046668 (Mouse)

Gene Details

CXXC finger 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000054307, Mouse)

Protein Percentage 93.67%
CDS Percentage 91.46%
Ka/Ks Ratio 0.09335 (Ka = 0.0294, Ks = 0.3154)

Genome Location

Sequence Coding sequence

Length: 963 bp    Location: 32450624..32485249   Strand: +
Raw sequence   
>XM_004841850.1
ATGTCGAGCCTCGGTGGTGGCTCCCAGGATGCCGGCAGCAGTAGCAGGAGCAGCACCACCACCACCACCACCAACGGCAGCAGTGGCCCAAAGGCAGGAGCAACAGACAAGAGTACAGCAGTGGTGGCCACTACGCCAGCCTTGGTGGCGGATGACGCGCCACCCCCTGAGCGTCGGAACAAGAGTGGCATCATCAGCGAACCCCTCAACAAGAGCCTGCGTCGCTCCCGTCCACTCTCCCACTACTCTTCCTTTGGTGGCAGTGGTGGTAGTGGTGGTGGCAGCATGATGGGCGGAGAGTCTGCTGACAAGGCCGCTGCAGCTGCGGCCGCCCTATTGGCCAATGGTCACGACCTCGAGGCGGCCATGGCAGTGGACAAAAGCAACCCTACCTCAAAGCACAAAAGTGGTGCTGTGGCCAGCCTACTGAGCAAGGCAGAGCGGGCCACAGAGCTGGCAGCCGAGGGACAGCTGACACTGCAGCAGTTTGCGCAGTCCACGGAGATGCTGAAGCGCGTGGTGCAGGAGCACCTCCCACTCATGAGTGAGGCAGGTGCAGGCCTGCCTGACATGGAGGCTGTGGCGGGCACTGAAGCCCTCAATGGCCAGTCCGATTTCCCCTACCTGGGCGCTTTCCCCATCAACCCAGGCCTCTTCATCATGACCCCAGCAGGCGTGTTCCTGGCTGAGAGTGCGCTGCACATGGCTGGCCTGGCCGAGTACCCCATGCAGGGAGAGCTGGCCTCTGCCATCAGCTCGGGCAAGAAGAAGCGGAAACGCTGTGGCATGTGTGCGCCCTGTCGGCGGCGCATCAACTGTGAGCAGTGCAGCAGTTGTAGGAACCGAAAGACTGGCCATCAGATTTGCAAATTCAGAAAATGTGAGGAACTCAAAAAGAAGCCTTCCACTGCTCTGGAGAAGGTGATGCTTCCGACGGGAGCCGCCTTCCGGTGGTTTCAGTGA

Related Sequences

XP_004841907.1 Protein

Cxxc5 PREDICTED: CXXC-type zinc finger protein 5 isoform X6 [Heterocephalus glaber]

Length: 320 aa      
>XP_004841907.1
MSSLGGGSQDAGSSSRSSTTTTTTNGSSGPKAGATDKSTAVVATTPALVADDAPPPERRNKSGIISEPLNKSLRRSRPLSHYSSFGGSGGSGGGSMMGGESADKAAAAAAALLANGHDLEAAMAVDKSNPTSKHKSGAVASLLSKAERATELAAEGQLTLQQFAQSTEMLKRVVQEHLPLMSEAGAGLPDMEAVAGTEALNGQSDFPYLGAFPINPGLFIMTPAGVFLAESALHMAGLAEYPMQGELASAISSGKKKRKRCGMCAPCRRRINCEQCSSCRNRKTGHQICKFRKCEELKKKPSTALEKVMLPTGAAFRWFQ