Details from NCBI annotation

Gene Symbol Tmem173
Gene Name transmembrane protein 173, transcript variant X2
Entrez Gene ID 101722845

Database interlinks

Part of NW_004624743.1 (Scaffold)

For more information consult the page for NW_004624743.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMEM173 ENSCPOG00000025950 (Guinea pig)

Gene Details

transmembrane protein 173

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019461, Guinea pig)

Protein Percentage 77.57%
CDS Percentage 83.11%
Ka/Ks Ratio 0.3533 (Ka = 0.1417, Ks = 0.401)

TMEM173 ENSG00000184584 (Human)

Gene Details

transmembrane protein 173

External Links

Gene Match (Ensembl Protein ID: ENSP00000331288, Human)

Protein Percentage 75.46%
CDS Percentage 82.41%
Ka/Ks Ratio 0.37631 (Ka = 0.1558, Ks = 0.4139)

Tmem173 ENSMUSG00000024349 (Mouse)

Gene Details

transmembrane protein 173

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000111393, Mouse)

Protein Percentage 71.16%
CDS Percentage 77.16%
Ka/Ks Ratio 0.2733 (Ka = 0.1884, Ks = 0.6893)

Tmem173 ENSRNOG00000042137 (Rat)

Gene Details

transmembrane protein 173 (Tmem173), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063348, Rat)

Protein Percentage 71.24%
CDS Percentage 76.25%
Ka/Ks Ratio 0.28041 (Ka = 0.1996, Ks = 0.7117)

Genome Location

Sequence Coding sequence

Length: 1377 bp    Location: 32283248..32277202   Strand: -
>XM_004841842.1
ATGGTTCAGAAAAGAATCTGCATCTGGAAATCCTCATCAACCAGACAGGGGCACTCGTTCGTGGCTTTCAACCCTGTGTGCTGTCCTGCTGGATCTTATCAGTGCTTGGATCAGTGGCAGGGCTGTGGTTGCAGGTTACACCCTGAGAGGCTCGGGTGGCTGCTGGTAGCCATTGCACCGACTGGTCCTTTGCTCCCCGTGGTCTTCCAAGAACAACCTGTGTCCAGGAGGCAGAAGATGCTGTACTCCAGCCTGCATCCATCCATCCCACGCCCCAGGGGTCACAGGGCCCAGGAGGCAGCTTTGGTCCTGCTAGGGTTCTGCCTAATGGTCCTTTGGGGGACTGGGGAGCCGATGGACCACACTCTCCGATATCTGGTGTTCCACCTCGCCTCCCTGCAGCTGGGCCTGCTGTTGAAAGGGGCTTGCTGTCTGGCCGAAGAGCTATGCCATATCCATTCCAGGTACCGGGGCAGCTACTGGAAGGCTGTGCAGGCCTGCCTGGGCTGCCCCATCCGCCGAGTGGCAGTGCTGCTGCTGTCCTGCTATTTCTACTGCTTCCTCCCGATGGACACTGCCCTGTCCCTCAGCTGGACACTTGCACTCCTGGGCCTCTCAAAAGCACTCAGCATCCTCCTGGGCCTCCAGGGCCTGGCTCCAGCTGAGATCTCTGCAGTCTGTGAAAAAGGGAACTTCAATGTGGCCCACGGGCTAGCATGGTCATATTACATTGGGTACCTGCAGCTGATTCTGCCAGGGCTCCAGGCTCGGATCCAAGCTTACAGTGAGCTTCACAACAACATACTATGGGGTGCAGCGAGCCGCCGGCTGTACATCCTCTTCCCGTTGGACTGTGGGGTGCCTGATGACCTGAGTGTGGTGGATCCCAACATTCGCTTCCTGCATACTCTGCCCCAGCAGAGCATTGACTGTGCTGGGATCAAAGGGCGGATTTACTCTAACTGCGTCTATCAGCTTCTGGAGAACGGGCAGCCGGTAGGCACCTGTGTCCTGGAGTATGCCACGCCCTTGAAGACCTTGTTTGCCATGTCACAGGATGCCAGGGCTGGCTTTAGCCGGGATGATCGGCTTGAACAGGCCAAGCTCTTCTGCCGGGCACTTGAGGACATCCTGGCAGATGTTCCCGAGTGTCAGAACATGTGCCGCCTCATTATCTACCAGGGACCCACAGAAGGAAGCAGCTTCTCGCTGTCACAGGAGGTTCTCCGGCACCTGCGGCAGGAGGAAAGGGAGGAGGTTACTCTTGGCAGCTCCGAGACCTCAGCGGTGCCAGACTCAACCACACTGTCCCAGGAACCCCAGCTCCTCATCAGTGGGATGGATCAGCCTCTCCCACTCCGTACGGATATCTTCTGA

Related Sequences

XP_004841899.1 Protein

Tmem173 PREDICTED: stimulator of interferon genes protein isoform X2 [Heterocephalus glaber]

Length: 458 aa      View alignments
>XP_004841899.1
MVQKRICIWKSSSTRQGHSFVAFNPVCCPAGSYQCLDQWQGCGCRLHPERLGWLLVAIAPTGPLLPVVFQEQPVSRRQKMLYSSLHPSIPRPRGHRAQEAALVLLGFCLMVLWGTGEPMDHTLRYLVFHLASLQLGLLLKGACCLAEELCHIHSRYRGSYWKAVQACLGCPIRRVAVLLLSCYFYCFLPMDTALSLSWTLALLGLSKALSILLGLQGLAPAEISAVCEKGNFNVAHGLAWSYYIGYLQLILPGLQARIQAYSELHNNILWGAASRRLYILFPLDCGVPDDLSVVDPNIRFLHTLPQQSIDCAGIKGRIYSNCVYQLLENGQPVGTCVLEYATPLKTLFAMSQDARAGFSRDDRLEQAKLFCRALEDILADVPECQNMCRLIIYQGPTEGSSFSLSQEVLRHLRQEEREEVTLGSSETSAVPDSTTLSQEPQLLISGMDQPLPLRTDIF