Sequence details NCBI ID: XM_004841836.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Prob1
Gene Name proline-rich basic protein 1
Entrez Gene ID 101721203

Database interlinks

Part of NW_004624743.1 (Scaffold)

For more information consult the page for NW_004624743.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PROB1 ENSCPOG00000026641 (Guinea pig)

Gene Details

proline-rich basic protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017211, Guinea pig)

Protein Percentage 76.04%
CDS Percentage 82.33%
Ka/Ks Ratio 0.46567 (Ka = 0.1612, Ks = 0.3462)

PROB1 ENSG00000228672 (Human)

Gene Details

proline-rich basic protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000416033, Human)

Protein Percentage 72.71%
CDS Percentage 79.22%
Ka/Ks Ratio 0.33116 (Ka = 0.1782, Ks = 0.538)

Prob1 ENSMUSG00000073600 (Mouse)

Gene Details

proline rich basic protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000095224, Mouse)

Protein Percentage 67.35%
CDS Percentage 74.01%
Ka/Ks Ratio 0.31385 (Ka = 0.2345, Ks = 0.7473)

Prob1 ENSRNOG00000039596 (Rat)

Gene Details

proline rich basic protein 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000057427, Rat)

Protein Percentage 67.14%
CDS Percentage 74.06%
Ka/Ks Ratio 0.31488 (Ka = 0.235, Ks = 0.7465)

Genome Location

Sequence Coding sequence

Length: 3015 bp    Location: 32201203..32195039   Strand: -
Raw sequence   
>XM_004841836.1
ATGCTGACTGCGCTCGTCCCGCCAACCCTGCCTGGGCTCCCAAGGCGGCTGCCCGCAGCGCCCCCACGGCGCCAGGATTCCTCGGGTTCGTCAGGTTCCTACCACACAGCTCCGGGTTCTCCCGAGCCCCCGGACGCAGGGCCAGACGCAGGTTGGGAAGACTGGCCCTGGGTGGCCCCCGGGCGGGGGGCGGGTGCGCAGCCTTGCCTGTCCGTCAGAGCCCAGAATAGCCGCCAGCAGCCCTGGTCCGGCTCGGGTTTCCCGCGAGGCCAGGGCTCCGCCCCGCTGCCGCCTCATCCCCAGCTGCGCGTGCTGCCGTCGGGGGAAATGGAAGTGATCTTCGGCGCCGGGCCCCGGTTCAGCCCCTCGGATTTGGAGGATCGTGAGGTGCAACAGCTCACGGCGCAGCCATTCAGCCCCTCGCCGCTGGGGACAGCGTCTCCAGCCCCTGGCCCACCGCTGCCCCCGGCTCCAGACGGCGGATCCCGCTGGGCCACCTACCTGGAGCTGCGTCCCAGGGGGCCGAGTCCTGCCGCCTCCGCTCAGTTTGAGTGTGTGGAGGTGGCGCTGGAGGAGTGCCCTGCGCCGGTCAGGCCCCGGACGGTGCCCAAGCGTCAGATCGAGCTGCGCCCCAGGCCCCCAAGTCCTCCGCGGGAGGCCTGCACGCCGCGCCCCCGACTGCTTTTGCGCACCGGCTCCTTGGACGAATCTCTGAGCCGCCTACAGGTCGCAGCGGGCCTCGTGCAGACGGCGTTAGCCAGAAAACTGGGTCCTGCGACCCCAGCCCCGAGTAGTCCCAGGGTTAGACCCGCGGAGCGGCCAGAACCTAAGACTGGAGAAACAACCAGCAGCACCCGCGTGGTTCTGGAAGAGGCCCGGTCTTGGCCACCCCGCCCACAAGAGAGTTCAGGCCCCGCCAGAGCCCCACGGCCTTGGCCCAGCCTCCGTGAGCGCGCTATCCGGCGCGACAAGCCCGCGCCTGGGTCCGAGCCGCTGGGTCCTGTTAGTTCTAGCATCTTCTTGCAGTCAGAGGAAAAGACCCAGGAGGCACGCAACCATCGACCCAAGACTTGGTTCCCGAAAGAGACTCCGTTCCCGAAAGAGACTCCGGGTCGAATCGCCCCAAGGGAACGGAATCCGTCTTTGGAGTCTAGAGGCCCCTGGGAGGTTCTGAGTAGGGCTGACAGGCCTAAGAGCCCCTCTCGGCTGGGCCAGGCTCCAAATGGGGCCGTGCGGGATTCTCGCTGCCCGTCCCCTCAGAACCTGTCCCCGTGGAATCGGACTGTCTTGAGGGTGAGTAGCCCTCCGTTCCGTGAAGCATCTTCCGCGTGGGAAAATCGGAATCCCGCCGTCGAGGTACCAGTCAGCAGGAGGAGCCCTTCCCCACCAACTCTCTCCCAGTGGAATCAGAACGGTGTGAGAGCTAGAAGGAGCCCATCCCCCGAAGTTCCTTCCCAGTGGGAGGTTCCGCCTCGGGCAGTCCGGGATGCCGTAGGGCGGGGTAAGAGCCCGTCCCTACCATCCCTGTGTCCGTGGGACGCGCCAGATAGTCCTATTGGATTTCGGAGCCCATTGCCCCAGGAGACCTGGGGACCCAGTCTGCAGGGGTCATCGATAGCATTTAGGCAGGAAGTTATGAATGGCATAGCTCAAGATTTGGCGCCGCCTACACCATCCATACCTGGGACCCCAGAACTAGCCGAGGTGCAGAGCCCGCCCACGCGGGAAATTCCTGATCTTGCCTTCCGCAGCAATCAGCCGTCACCAGAGGTAGATCCACCCGAGCCGCCTCGCAGTCACCTCGTGGGCGCGCTGGACTCTGACACGCGCCCAGGAGTCTTGGGCTCTGAAGAAGAGGCCTTTGAGCCCCCGCGCGTGGCCATTCCGCGGCCTCGAGATGTACGCAAGATGGTGAAGACCACCTATGCGTCCACCTTCCCCGCGGGAAGCCCAGGGTCAGAAAAGCCTGTGCCTAAGGACCACTGCGGGGAGGAGGGCGGCCTATCCCAGACACGAGAGTTCCAGGCGCTGGGGTCCCCCGCTCCGGGTCACTACACCTCCGTTTTTCTCAAAGACTTTTTGCCAGTTGTGCCGCACCCCTATGAGCCCCCGGAGCCATCCCTCGACACATTTCCCCGGGACGCCTCCAAGCCCAACGGGGTCTTGCGGCGGAGGGCAGAAAACAGCACGGCGAAACCCTTTGCGCGCACTGAGATCCGCCTGCCGGGTGCCCTGGCTTTAGGGCGGTGGCCGGAGAGAACGCCGGGAGTCCAAATGCGCGGTACCGGCCGAGAGAACCCGGATGCTGAGGCCTTGTGCCTAGTTCCAGACGGCCAGGGTCGGACCAGCCCCCTAGGCGGCGCTCGCAGCTCACCTCAGCGGGCCCCTAACGCGCCGCTGGAGCCTCAGCCAGCCCGCCCAAGCTCTCCGCAGGCGCGCCCCAACTCCAGCCCTGGAAAGGCCCCCAAACTGGAGACACCTTCGATGGCCCCCGAGCCCGCGGCTGCCTTGCAGGCGCCCCTCCCACCCCAACCGCGCGCTGCCTCGGCGCCTCCCGCAGACCGGTGCAGGCAAGGCCTCTCCCAGGGGACCCGGAGGCAGCCAGAGGCCTCGCACCCCGGAAAGGTTCTGGTGGACCCGGAGAGCGGCCGCTACTACTTTGTGGAGGCGCCGCGACAGCCGAGACTACGGCTGCTCTTCGACCCTGAGAGCGGGCAGTATGTCGAGGTGCTGCTGCCACCTGCGTCCCCGGGGCTGCCCCGCCATGTCTACGCCCCGCTGGCCATGGGGCCTGGCCTCTGCCCACCCGCCTATGGGCCCATGCCGAGCCTCGCACTGCCGCCGTCCCTCGGCAGCCCCCTGCTGCCCTGGGCTTCTGAGGCAGGGCCCCTAGACGGGATGTACTACCTGCCTGTGAGCGGAACCCCTAGCCCCGCCCCTTCCCTGCTTCTCTGTTCCCCACCCTCCAGCTCGCGTCCCGCCCAGCCTGGCAAGGGCTCAGTGGTCCCGTTGTGA

Related Sequences

XP_004841893.1 Protein

Prob1 PREDICTED: proline-rich basic protein 1 [Heterocephalus glaber]

Length: 1004 aa      View alignments
>XP_004841893.1
MLTALVPPTLPGLPRRLPAAPPRRQDSSGSSGSYHTAPGSPEPPDAGPDAGWEDWPWVAPGRGAGAQPCLSVRAQNSRQQPWSGSGFPRGQGSAPLPPHPQLRVLPSGEMEVIFGAGPRFSPSDLEDREVQQLTAQPFSPSPLGTASPAPGPPLPPAPDGGSRWATYLELRPRGPSPAASAQFECVEVALEECPAPVRPRTVPKRQIELRPRPPSPPREACTPRPRLLLRTGSLDESLSRLQVAAGLVQTALARKLGPATPAPSSPRVRPAERPEPKTGETTSSTRVVLEEARSWPPRPQESSGPARAPRPWPSLRERAIRRDKPAPGSEPLGPVSSSIFLQSEEKTQEARNHRPKTWFPKETPFPKETPGRIAPRERNPSLESRGPWEVLSRADRPKSPSRLGQAPNGAVRDSRCPSPQNLSPWNRTVLRVSSPPFREASSAWENRNPAVEVPVSRRSPSPPTLSQWNQNGVRARRSPSPEVPSQWEVPPRAVRDAVGRGKSPSLPSLCPWDAPDSPIGFRSPLPQETWGPSLQGSSIAFRQEVMNGIAQDLAPPTPSIPGTPELAEVQSPPTREIPDLAFRSNQPSPEVDPPEPPRSHLVGALDSDTRPGVLGSEEEAFEPPRVAIPRPRDVRKMVKTTYASTFPAGSPGSEKPVPKDHCGEEGGLSQTREFQALGSPAPGHYTSVFLKDFLPVVPHPYEPPEPSLDTFPRDASKPNGVLRRRAENSTAKPFARTEIRLPGALALGRWPERTPGVQMRGTGRENPDAEALCLVPDGQGRTSPLGGARSSPQRAPNAPLEPQPARPSSPQARPNSSPGKAPKLETPSMAPEPAAALQAPLPPQPRAASAPPADRCRQGLSQGTRRQPEASHPGKVLVDPESGRYYFVEAPRQPRLRLLFDPESGQYVEVLLPPASPGLPRHVYAPLAMGPGLCPPAYGPMPSLALPPSLGSPLLPWASEAGPLDGMYYLPVSGTPSPAPSLLLCSPPSSSRPAQPGKGSVVPL