Details from NCBI annotation

Gene Symbol Slc23a1
Gene Name solute carrier family 23 (nucleobase transporters), member 1, transcript variant X3
Entrez Gene ID 101719450

Database interlinks

Part of NW_004624743.1 (Scaffold)

For more information consult the page for NW_004624743.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC23A1 ENSCPOG00000014082 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012685, Guinea pig)

Protein Percentage 92.46%
CDS Percentage 91.46%
Ka/Ks Ratio 0.15057 (Ka = 0.0401, Ks = 0.2665)

SLC23A1 ENSG00000170482 (Human)

Gene Details

solute carrier family 23 (ascorbic acid transporter), member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000302851, Human)

Protein Percentage 90.8%
CDS Percentage 88.85%
Ka/Ks Ratio 0.12526 (Ka = 0.0498, Ks = 0.3977)

Slc23a1 ENSMUSG00000024354 (Mouse)

Gene Details

solute carrier family 23 (nucleobase transporters), member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000025212, Mouse)

Protein Percentage 90.64%
CDS Percentage 86.06%
Ka/Ks Ratio 0.08585 (Ka = 0.0506, Ks = 0.5896)

Slc23a1 ENSRNOG00000019938 (Rat)

Gene Details

solute carrier family 23 (ascorbic acid transporter), member 1 (Slc23a1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027048, Rat)

Protein Percentage 90.62%
CDS Percentage 85.82%
Ka/Ks Ratio 0.08244 (Ka = 0.0511, Ks = 0.6197)

Genome Location

Sequence Coding sequence

Length: 1797 bp    Location: 32186614..32174923   Strand: -
>XM_004841832.1
ATGAGGGCTCAAGAGGACTCCGAGGACCAGACACAGGGAGCTTCCACCAGGAACCCGAAGATGTCCCTGCCCACAGAGCCCAAGACTGACATGTTGTACAAGATTGAAGATGTGCCACCCTGGTACCTGTGCATCCTGCTGGGCTTCCAGCATTACCTGACTTGCTTCAGCGGCACCATCGCCGTGCCCTTCCTCCTGGCTGAGGCGCTGTGTGTGGGCCACGATCAGTACATGGTCAGTCAACTCATTGGCACCATCTTCACATGTGTGGGCATCACCACTCTCATCCAGACCACACTGGGCATCCGGCTTCCCCTGTTCCAGGCCAGTGCCTTTGCATTTCTGGTTCCAGCCAAAGCCATCCTGGCCCTGGAGAAGTGGAAATGCCCGCCAGAAGAGGAGATCTACGGTAACTGGAGTCTGCCTCTGAACACCTCTCATATCTGGCACCCACGGATGCGAGAGATCCAGGGTGCAATCATGGTGTCCAGCATAGTGGAGGTGGTGATCGGGCTGACAGGGCTGCCTGGGGCCCTCCTCAGCTACATTGGGCCTCTCACGGTCACCCCCACTGTCTCTCTTATTGGCCTCTCCGTCTTCCAAGCTGCTGGCGACCGAGCTGGCTCCCACTGGGGCATCTCAGCTTGCTCCATTCTCCTGATCGTCCTCTTCTCCCAGTACCTTCGCAATGTCGCCTTCCTGCTGCCTGTCTACCGATGGAGCAAGGGCCTCACTCTTTTCCGAATCCAGATCTTCAAGATGTTTCCTATTGTGCTGGCCATTATGACCGTGTGGCTCCTCTGCTATGTGCTGACACTGACAGATGTGCTGCCCTCAGATCCGACAGCTTATGGCTTCCAGGCACGAACTGATGCTCGTGGGGATATCATGGCTATTTCACCCTGGATCCGCATCCCCTATCCCTGTCAGTGGGGCTTGCCCACAGTGACAGTGGCTGCTGTCCTGGGAATGTTCAGTGCCACCCTGGCAGGCATCATCGAGTCCATTGGCGATTACTATGCTTGCGCCCGCCTGGCAGGTGCCCCGCCCCCTCCAGTCCATGCAATCAATAGGGGCATCTTCACCGAAGGCATCTGCTGCATTATCGCAGGACTGCTGGGCACCGGCAACGGGTCCACCTCGTCAAGTCCAAATATTGGCGTCCTAGGGATTACCAAGGTGGGCAGCCGCCGTGTGGTGCAGTACGGTGCTGGTATCATGCTGGTCCTGGGCGCCGTCGGCAAATTCACTGCTCTGTTCGCCTCGCTCCCTGACCCCATTCTGGGGGGCATGTTCTGCACCCTCTTCGGCATGATTACGGCTGTGGGGTTGTCCAACCTGCAGTTTGTGGACATGAACTCCTCCCGCAACCTTTTTGTGCTGGGATTTCCCATGTTCTTCGGGCTCACGTTGCCTAATTACCTGGATTCTAACCCTGGAGTCATCAACACAGGTATTCCAGAAGTGGACCAGATTCTGACTGTGTTGCTGACCACGGAGATGTTTGTGGGCGGATGCCTTGCTTTCATATTGGACAACACAGTGCCAGGGAGCCCCGAGGAACGAGGCCTGATTCAGTGGAAAGCTGGGGCCCATGCCAACAGTGAGACATCTGCCAGCCTGAAGAGTTACGATTTCCCCATTGGGATGGACACAGTAAAAAAGATTGCCTTTCTGAAATACATTCCCATCTGCCCAGTCTTCAAAGGATTCTCTTTGAGATCAAAAAACCACCCTCCAGTTCAAGAAGACACTCCAGAAAATACAGAAGCTGTATCTGTGTGCACCAAGGTCTGA

Related Sequences

XP_004841889.1 Protein

Slc23a1 PREDICTED: solute carrier family 23 member 1 isoform X3 [Heterocephalus glaber]

Length: 598 aa      View alignments
>XP_004841889.1
MRAQEDSEDQTQGASTRNPKMSLPTEPKTDMLYKIEDVPPWYLCILLGFQHYLTCFSGTIAVPFLLAEALCVGHDQYMVSQLIGTIFTCVGITTLIQTTLGIRLPLFQASAFAFLVPAKAILALEKWKCPPEEEIYGNWSLPLNTSHIWHPRMREIQGAIMVSSIVEVVIGLTGLPGALLSYIGPLTVTPTVSLIGLSVFQAAGDRAGSHWGISACSILLIVLFSQYLRNVAFLLPVYRWSKGLTLFRIQIFKMFPIVLAIMTVWLLCYVLTLTDVLPSDPTAYGFQARTDARGDIMAISPWIRIPYPCQWGLPTVTVAAVLGMFSATLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGICCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAGIMLVLGAVGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFPMFFGLTLPNYLDSNPGVINTGIPEVDQILTVLLTTEMFVGGCLAFILDNTVPGSPEERGLIQWKAGAHANSETSASLKSYDFPIGMDTVKKIAFLKYIPICPVFKGFSLRSKNHPPVQEDTPENTEAVSVCTKV