Sequence details NCBI ID: XM_004841817.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Egr1
Gene Name early growth response 1
Entrez Gene ID 101714811

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624743.1 (Scaffold)

For more information consult the page for NW_004624743.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

EGR1 ENSCPOG00000027141 (Guinea pig)

Gene Details

early growth response 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020348, Guinea pig)

Protein Percentage 95.64%
CDS Percentage 92.25%
Ka/Ks Ratio 0.06689 (Ka = 0.0205, Ks = 0.3057)

EGR1 ENSG00000120738 (Human)

Gene Details

early growth response 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000239938, Human)

Protein Percentage 95.36%
CDS Percentage 90.48%
Ka/Ks Ratio 0.04401 (Ka = 0.021, Ks = 0.4782)

Egr1 ENSMUSG00000038418 (Mouse)

Gene Details

early growth response 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000069616, Mouse)

Protein Percentage 93.22%
CDS Percentage 87.07%
Ka/Ks Ratio 0.0482 (Ka = 0.0323, Ks = 0.6691)

Egr1 ENSRNOG00000019422 (Rat)

Gene Details

early growth response 1 (Egr1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026303, Rat)

Protein Percentage 93.04%
CDS Percentage 87.28%
Ka/Ks Ratio 0.05221 (Ka = 0.0331, Ks = 0.6334)

Genome Location

Sequence Coding sequence

Length: 1626 bp    Location: 31247845..31251593   Strand: +
Raw sequence   
>XM_004841817.1
ATGGCCGTGGCGAAGGCCGAGATGCAGCTGATGTCCCCGCTGCAGATCTCTGACCCGTTCGGCTCCTTTCCTCATTCACCCACCATGGACAATTACCCCAAACTGGAGGAGATGATGCTGCTGAATAACGGGGCTCCCCAGTTCCTTGGTGCCGCCGGAGCCCCAGAGGGGAGCGGTGGTAACAGCAGCAACAGCGGGGGCGGTGCAGGTGGAGGGGGCAGTAGCAGCGGCAGCGGCAGCGCCTTCAACCCTCAGGGGGAGCCGGGCGAGCAACCCTACGAGCACCTGACCGCAGAGTCTTTTCCTGAGATCTCTTTGAATAACGAGAAGGTGATGGCGGACACAAGCTATCCCAGCCAAACCACGCGGCTACCCCCCATCACCTACACTGGCCGATTCTCTCTGGAGCCTGCACCCAACAGTGGCAACACCTTGTGGCCTGAGCCCCTCTTCAGCCTAGTCAGTGGCCTGGTGAGCATGAGCAACCCACCAGCCTCCTCATCCTCAGCACCGTCTCCAGCAGCCTCTTCCTCCTCCTCGGCCTCCCAGAGCCCACCCCTGAGCTGTGCAGTGCCATCCAACGATAGCAGTCCCATTTACTCTGCTGCACCTACCTTCCCCACACCCAACTCTGACATTTTCCCAGAGCCACAAGGTCAGGCCTTTCCGGGCTCTGTAGGCACGGTGCTCCAGTACCCACCTCCGGCCTACCCTGCTGCTGGCAAAGGTGGCTTCCAGGTTCCCATGATCCCGGACTACCTGTTTCCACAGCAACAGGGAGATCTGGGCCTGGGGACCCCAGATCAGAAGCCTTTCCAAGGCCTGGAGAGTCGTACCCAGCAACCTTCGCTTACACCGCTCTCTACGATTAAAGCCTTTGCCACCCAGTCGGGCTCCCAGGACTTAAAGGCCCTCAATACCACTTACCAGTCTCAGCTCATCAAACCCAGCCGAATGCGCAAGTACCCCAACCGGCCCAGCAAGACGCCCCCCCACGAACGCCCCTATGCCTGCCCAGTGGAGTCCTGTGATCGCCGATTCTCTCGCTCAGATGAGCTTACTCGCCACATCCGCATCCACACAGGCCAGAAGCCCTTCCAGTGTCGCATCTGCATGCGCAACTTCAGCCGAAGTGACCACCTTACCACCCACATCCGCACCCACACAGGCGAGAAGCCATTCGCCTGTGACATCTGTGGGAGAAAGTTTGCCAGGAGCGATGAACGCAAGAGGCACACCAAAATCCACTTGCGGCAGAAGGACAAGAAGGCAGACAAAAGTGTTATGGCCTCTTCGGCCACCTCCTCCCTCTCTTCCTACCCATCTCCGGTTGCTACCTCTTATCCATCCCCAGTCACTACCTCCTACCCATCCCCAGCCACCACCTCCTACCCATCCCCTGTGCCCACCTCCTACTCCTCTCCTGGCTCCTCCACCTACCCATCCCCCGTGCACAGTGGCTTCCCATCGCCCTCCGTGGCCACCACCTACGCTTCTGTGCCCCCAGCTTTCCCTGCCCAGGTCAGCAGCTTCCCTTCCTCAGCTGTCACCAACTCCTTTAGTGCCTCCACAGGGCTTTCGGACATGACAGCAACCTTTTCTCCCAGGACAATTGAAATTTGCTAA

Related Sequences

XP_004841874.1 Protein

Egr1 PREDICTED: early growth response protein 1 [Heterocephalus glaber]

Length: 541 aa      View alignments
>XP_004841874.1
MAVAKAEMQLMSPLQISDPFGSFPHSPTMDNYPKLEEMMLLNNGAPQFLGAAGAPEGSGGNSSNSGGGAGGGGSSSGSGSAFNPQGEPGEQPYEHLTAESFPEISLNNEKVMADTSYPSQTTRLPPITYTGRFSLEPAPNSGNTLWPEPLFSLVSGLVSMSNPPASSSSAPSPAASSSSSASQSPPLSCAVPSNDSSPIYSAAPTFPTPNSDIFPEPQGQAFPGSVGTVLQYPPPAYPAAGKGGFQVPMIPDYLFPQQQGDLGLGTPDQKPFQGLESRTQQPSLTPLSTIKAFATQSGSQDLKALNTTYQSQLIKPSRMRKYPNRPSKTPPHERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKDKKADKSVMASSATSSLSSYPSPVATSYPSPVTTSYPSPATTSYPSPVPTSYSSPGSSTYPSPVHSGFPSPSVATTYASVPPAFPAQVSSFPSSAVTNSFSASTGLSDMTATFSPRTIEIC