Details from NCBI annotation

Gene Symbol Fam53c
Gene Name family with sequence similarity 53, member C, transcript variant X2
Entrez Gene ID 101713298

Database interlinks

Part of NW_004624743.1 (Scaffold)

For more information consult the page for NW_004624743.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FAM53C ENSCPOG00000006598 (Guinea pig)

Gene Details

family with sequence similarity 53, member C

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005943, Guinea pig)

Protein Percentage 96.68%
CDS Percentage 96.17%
Ka/Ks Ratio 0.17893 (Ka = 0.0167, Ks = 0.0934)

FAM53C ENSG00000120709 (Human)

Gene Details

family with sequence similarity 53, member C

External Links

Gene Match (Ensembl Protein ID: ENSP00000239906, Human)

Protein Percentage 94.39%
CDS Percentage 94.3%
Ka/Ks Ratio 0.2144 (Ka = 0.0294, Ks = 0.1373)

Fam53c ENSMUSG00000034300 (Mouse)

Gene Details

family with sequence similarity 53, member C

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000037034, Mouse)

Protein Percentage 93.37%
CDS Percentage 91.67%
Ka/Ks Ratio 0.14522 (Ka = 0.0354, Ks = 0.2439)

Fam53c ENSRNOG00000020261 (Rat)

Gene Details

Protein Fam53c

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027499, Rat)

Protein Percentage 94.1%
CDS Percentage 92.56%
Ka/Ks Ratio 0.15446 (Ka = 0.032, Ks = 0.2073)

Genome Location

Sequence Coding sequence

Length: 1179 bp    Location: 31130933..31144308   Strand: +
>XM_004841813.1
ATGATAACTCTGATCACTGAGCAGCTACAGAAGCAGACTCTGGATGAGCTGAAATGCACACGCTTCAGCATCAGTCTGCCTTTGCCTGATCATGCAGACATCTCCAACTGTGGGAACCCTTTCCAGCTTGTGTCTGAAGGTGCTTCCTGGAGGGGCCTTTCCCACTGTTCCTGTGCTGAGTTCCAGGACAGCCTCAGCTTCAGCTACCACCCCTCAGGCTTGAGCCTGCACCTCAGACCACCTAGTCGGGGAAGCTCCCCACAGGAGCAGCCCCTTTCCCAAATCCTAAGCCCTGAGCCCCCAGACCCAGAGAAGCTTCCTGTGCCCCCTGCTCCTCCATCCAAGAGGCACTGCCGCTCACTTTCAGTGCCCGTGGACCTGTCTCGCTGGCAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCCATCAAGCACCGGGGCAGTGGTGGAGGGGGTGGGCCGCAGGTGCCTCACCAGAGCCCCCCGAAGCGGGTCTCCAGCCTCAGGTTCCTCCAAGCTCCCAGTGCCTCTTCTCATTGTGCCCCAACCCATAGACCCTACAGCCCTCCTTTCTTCAGCCTGGCCCTGGCCCAAGATTCTTCTCAACCCTGTGCCACCTCCCCTCAAAGTGGCTCCTGGGAGAGCGACCCTGAGTCCTTGTCACCTTGCCCACCCCAGCGTCGCTTCTCCCTGTCACCCAGCCTGGGTCCACAGGCAAGCTGCTTCTTGCCCTCTGCTCGGAGCTCCCCTGCATCCTCCCCAGAGCTGCCCTGGCGACCTCGAGGTCTCCGAAACCTTCCCCGAAGCCGCTCACAGCCTTGTGATCTGGATGCCCGAAAAACTGGGATCAAGCGGCGCCACGAAGAGGACCCCCGACGCCTGCGGCCTTCCTTGGACTTTGACAAGATGAATCAGAAACCATACTCAGGAGCTCTCTGTCTCCAAGAAACAGCCCGGGAAGGCAGCGGCATCTCTCCACCATGGTTCATGGCCTGTAGCCCTGCACCTCTCTCTGCTTCCTGCAGCCCCGTTGAGGGTTCCTCCCAGGTGCTGAGTGAAAGTGAAGAGGAGGAAGAGGGGGCTGTGCGGTGGGGGCGACAGGCATTGAGCAAGCAGACACTGTGCCAGCAGGACTTTGGGGACCTGGACTTGAATCTGATTGAGGAGAACTAA

Related Sequences

XP_004841870.1 Protein

Fam53c PREDICTED: protein FAM53C isoform X2 [Heterocephalus glaber]

Length: 392 aa      View alignments
>XP_004841870.1
MITLITEQLQKQTLDELKCTRFSISLPLPDHADISNCGNPFQLVSEGASWRGLSHCSCAEFQDSLSFSYHPSGLSLHLRPPSRGSSPQEQPLSQILSPEPPDPEKLPVPPAPPSKRHCRSLSVPVDLSRWQPVWRPAPSKLWTPIKHRGSGGGGGPQVPHQSPPKRVSSLRFLQAPSASSHCAPTHRPYSPPFFSLALAQDSSQPCATSPQSGSWESDPESLSPCPPQRRFSLSPSLGPQASCFLPSARSSPASSPELPWRPRGLRNLPRSRSQPCDLDARKTGIKRRHEEDPRRLRPSLDFDKMNQKPYSGALCLQETAREGSGISPPWFMACSPAPLSASCSPVEGSSQVLSESEEEEEGAVRWGRQALSKQTLCQQDFGDLDLNLIEEN