Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101709447

Database interlinks

Part of NW_004624743.1 (Scaffold)

For more information consult the page for NW_004624743.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PKD2L2 ENSCPOG00000013263 (Guinea pig)

Gene Details

polycystic kidney disease 2-like 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011940, Guinea pig)

Protein Percentage 84.62%
CDS Percentage 89.52%
Ka/Ks Ratio 0.47177 (Ka = 0.0919, Ks = 0.1947)

PKD2L2 ENSG00000078795 (Human)

Gene Details

polycystic kidney disease 2-like 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000290431, Human)

Protein Percentage 82.11%
CDS Percentage 87.39%
Ka/Ks Ratio 0.42916 (Ka = 0.1098, Ks = 0.2559)

Pkd2l2 ENSMUSG00000014503 (Mouse)

Gene Details

polycystic kidney disease 2-like 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000014647, Mouse)

Protein Percentage 73.83%
CDS Percentage 77.63%
Ka/Ks Ratio 0.20645 (Ka = 0.1647, Ks = 0.7979)

Pkd2l2 ENSRNOG00000025489 (Rat)

Gene Details

polycystic kidney disease 2-like 2 (Pkd2l2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000030483, Rat)

Protein Percentage 73.28%
CDS Percentage 76.86%
Ka/Ks Ratio 0.209 (Ka = 0.1738, Ks = 0.8318)

Genome Location

Sequence Coding sequence

Length: 1887 bp    Location: 30743052..30771445   Strand: +
>XM_004841800.1
ATGGTCGAGGCGTCTCGCGGTTACCGAGGCGGGCCTTCGAAACATAAGCTGCATTACATAAAGGAAGTAGAAATTAGAACCACCCTTAAAGAGTTGTTACTCTACTTAATTTTTCTAATAAACCAGTGTATATTGACTTTTGGGATGGTAAATCCACATATGTATTACTTTAACAAAGTTATATCATCTCTGTTTTTGAAGNGTTCTGTACCTGGTGATGACAGAACCAACTTTAAGTCTATTCACAGCATAACTGATTTTTGGAAGTTTATGGAAGGACCCCTTTTGGAAGGTTTGTACTGGGATTCATGGTACAATAACCAAAAGCTGTATAATTTAAAAAACAGCAGTCGCATCTACTATGAGAACATTCTTCTTGGAGTCCCCAGAGTTCGGCAACTAAAAGTTTGCAATAATACATGCACGGTCTGTTCATCCTTTCAGTCTTTGATGAGTGAATGTTATGGCAAGTATACTTCTGAAAATGAAGACTTGTCTGATTTTGGCATCAAAAGTGGTACTAAATGGAAGTACTCTAACACCAACTCACCTTGGCACTGGGGATTCGTTGGTGCTTACCAAAATGGGGGATACATTTTCACCTTATCAAAATCAAAACCTGAAACCAAAAACAAGTTTATTGACCTTCGACTGAACAGCTGGATCACAAGAGGGACCAGGGTTATTTTTATTGACTTTTCATTATACAATGCTAATGTAAATCTGTTTTGCATTGTTAGATTGGTAGCAGAATTCCCTGCAACTGGAGGAATACTTACTTCATGGCAGTTTAACTCTCTGAAACTCCTCAGATATGTTAGTTACTATGATTATTTTATTGCTTCCTGTGAAATCACATTTTGTATTTTTCTTGTTGTCTTCACAATACAAGAACTCAAAAAAGTAAAAGAATTTAAGTTCGCCTATTTCAAAAGTATTTGGAACTGGTTAGAATTACTACTTCTGCTGCTGTTAAAAAGTACTGAAAAATATTCAGACTTCTATTTTCTTGCATACTGGCACATTTATTACAATAATATAATTGCTATTACTATCTTCTTTGCATGGATAAAGATATTCAAATTCATAAGCTTTAATAAGACAGTGTCTCAGCTGTCATCAACCTTGTCCTGCTGTATCAAAGACATAATAGAATTTGCCATCATGTTTTTTATAATATTCTTTGCTTATGCCCAGTTAGGATTTCTTGTTTTTGGATCGCAAGTTGATGACTTTTCCACTTTTCAAAATGCCATATTTGCACAATTTCAAATTGTTCTTGGAGATTTTAATTTTGCTGGTATTCACCAAGCCAGTTGGAACTTGGGACCCATTTACTTCATCACTTTTACCTTTTTTGTGTTCTTTGTCTTGCTGAACATGTTCTTGACAATAATTAACAATACCTATTCTGAAGTGAAAGCTGATTATGCAATAAGAAAAAGGCCAGATTTTGAAATTGGTAAAATGATTAAGATGACTTGCCATAATACTCTTGAGAAACTCAAACTGAAGAAAACTAAAAAAGACAAGAAAATCAAAAGCAACAGACATTTGGTTGAACAAACCAGAAGAGGAGGCTTTGATGAAAATCAAATCCAGAGATTCAAAGAGCTGAAAAAATGGAAAGAAAAGCTTGAGAGAAAGTATTATTCTACAGAAATGCAAGATGACTACCAGCCTGTCACTCAACAAGAATTTTGCAGACTCTTTTTATATGCTGTGGAACTGGAGAAGGAATTACATCAGTTTAAAACTAAACCGAGTGATGAAGTTTTCAGCTCTACAATATTAAGACAAGTGGAGGTAAGGATCATGTCCGACAAAGATTTATTCATGTTATTACCTAGACCTTTCCTTATTTTAGCCTCACTTGAAAAGCATTAA

Related Sequences

XP_004841857.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: polycystic kidney disease 2-like 2 protein [Heterocephalus glaber]

Length: 628 aa      View alignments
>XP_004841857.1
MVEASRGYRGGPSKHKLHYIKEVEIRTTLKELLLYLIFLINQCILTFGMVNPHMYYFNKVISSLFLKXSVPGDDRTNFKSIHSITDFWKFMEGPLLEGLYWDSWYNNQKLYNLKNSSRIYYENILLGVPRVRQLKVCNNTCTVCSSFQSLMSECYGKYTSENEDLSDFGIKSGTKWKYSNTNSPWHWGFVGAYQNGGYIFTLSKSKPETKNKFIDLRLNSWITRGTRVIFIDFSLYNANVNLFCIVRLVAEFPATGGILTSWQFNSLKLLRYVSYYDYFIASCEITFCIFLVVFTIQELKKVKEFKFAYFKSIWNWLELLLLLLLKSTEKYSDFYFLAYWHIYYNNIIAITIFFAWIKIFKFISFNKTVSQLSSTLSCCIKDIIEFAIMFFIIFFAYAQLGFLVFGSQVDDFSTFQNAIFAQFQIVLGDFNFAGIHQASWNLGPIYFITFTFFVFFVLLNMFLTIINNTYSEVKADYAIRKRPDFEIGKMIKMTCHNTLEKLKLKKTKKDKKIKSNRHLVEQTRRGGFDENQIQRFKELKKWKEKLERKYYSTEMQDDYQPVTQQEFCRLFLYAVELEKELHQFKTKPSDEVFSSTILRQVEVRIMSDKDLFMLLPRPFLILASLEKH