Sequence details NCBI ID: XM_004841798.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Fam13b
Gene Name family with sequence similarity 13, member B, transcript variant X6
Entrez Gene ID 101707665

Database interlinks

Part of NW_004624743.1 (Scaffold)

For more information consult the page for NW_004624743.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FAM13B ENSCPOG00000014446 (Guinea pig)

Gene Details

family with sequence similarity 13, member B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013012, Guinea pig)

Protein Percentage 95.12%
CDS Percentage 95.63%
Ka/Ks Ratio 0.22294 (Ka = 0.0249, Ks = 0.1118)

FAM13B ENSG00000031003 (Human)

Gene Details

family with sequence similarity 13, member B

External Links

Gene Match (Ensembl Protein ID: ENSP00000033079, Human)

Protein Percentage 91.86%
CDS Percentage 92.83%
Ka/Ks Ratio 0.20426 (Ka = 0.0415, Ks = 0.2032)

Fam13b ENSMUSG00000036501 (Mouse)

Gene Details

family with sequence similarity 13, member B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000038199, Mouse)

Protein Percentage 88.09%
CDS Percentage 87.81%
Ka/Ks Ratio 0.16069 (Ka = 0.0661, Ks = 0.4114)

Fam13b ENSRNOG00000020384 (Rat)

Gene Details

family with sequence similarity 13, member B (Fam13b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027663, Rat)

Protein Percentage 87.72%
CDS Percentage 87.88%
Ka/Ks Ratio 0.15804 (Ka = 0.0654, Ks = 0.414)

Genome Location

Sequence Coding sequence

Length: 2748 bp    Location: 30852541..30772969   Strand: -
Raw sequence   
>XM_004841798.1
ATGAGGAAGAGCTCCTCCCCTTCCTTGAGTAACTGCAACTCCGTTCTTGCTAACAAAATATTTGGAATTCCACTTGATGAGCTGCAGCAGGGAGGACATCCAGACAATGAGGTTCCATTCATAGTCCGCCACGTTGTGGACTATATTGAGGAACATGGCGGTCTGGAGCAACAAGGACTTTTTCAAGTCAATGGAAATGCTGAGACAGTGGAGTGGCTTCGGCAGAGATACGACAGTGGAGAAGAGGTGGATTTGGTTAAGGAAGCAGATGTTCCTTCAGCTATTAGTCTCCTTAGGTTTTTCCTTCAAGAACTTCCTGAACCTGTTATTCCTGGCAGTTTGCATATTCACTTGATGCACCTTTCTCAAGATTATAATAATGAAGATGAATTTGGAAGAAAGTTGAGGTTCCTCTTGCAACAGCTTCCACCTGTTAATTACAGCTTGTTAAAGTTTCTGTGTAGATTTTTAGCCAATGTAGCATCACATCATGAAGAAATTTGGTCTGCAAATTCTTTGGCTGCTGTCTTTGGTCCAGATGTCTTCCACATTTACACAGATGTGGAAGATATGAAAGAACAAGAAATAGTGAGCAGAATAATGGCAGGACTTCTGGAAAATTACTATGAATTCTTTGAGAATGAAGAGGAAGATTTTTCATCAAATGATTTGAGCTCAATTACTGAACAGGCAGGTAGCAACATTCTCTACAAACTGGAGTCTCGAGAGCAGGGATTTCATGAGGCCCTAGAGAAGGGACTTACAGCAGTCAAAGAAAGAAGAGATGTTAATGACCTTTCTGAGGAAGAAGAAGATGAAAAGCTGGAACGTATAGAAGAACTTCTAGAAGAGGGTGCAGAAAAATCAGATAACATGCCAGAGGTGGTGCAATTAAGGATGACTGAAAACATCCTGGAATCAAATAGTGTTATAGCATCAACAAGTGCCCATATATCTCCCACCAGCATCTTACCAGCCTCTGCAGAGGTTGATACTGCTGATGGTATTATTAATGCCAGTGATAGCAACAAGGAATGTTCGGAACCTGTGGCTGGCGCTAATTTAGACAGTGAAGTAATGCAGCAAGATACTATATTTGAGGATGAAGAAAATCAGTCTGCAGGTGTACTGTTAGAGCCATGCAGTGACCATGGTGATGCTGAAGATAGCTGTCCTGAGAGGAAAGAATATTTGGTATTTGACAGTGATAAATTGTCGCGTTTGTTTCTGGAATCTAGTAGCAAGATATGTGACTTGAATGCCAACACTGAATCAGAAGTGCCAAGAGGTCAAAGTGTTGGTGTTCAAGGGGAAGCAGCCTGTATCCAAATTCCACATTTAGATCTGAAGAATGCTTCTGATGGTGATAGATGGGAAGTGCCATGCCCTATCACTTTTCCCCTCATTGATTTCAAAACAATGCATCTGCAGAGAGATGGGGAGGAGCCATTTCCTGCCTTTAAGTCTTGGCAGGAAGACTCTGAGTCTGGAGAAGCTCAGCTGTCTCCACAAGCTGGAAGAATGAATCATCATCCCCTGGAAGAGGACTGTCCTCCAGTATTATCGCATCGAAGTTTAGATTTTGGGCAAAGCCAGCGTTTCCTACATGATCCAGAAACACTGAATTCCTCATCTAAAGCACTTTCATATGCAAGGATTCGAAGATCATCCTTTAGTTCAAAAGATGAAAAAAGAGAAGACAAAACACCTTATCAGTTGGTCAAGAAACTTCAGAAAAAGATCAGACAATTTGAGGAGCAATTTGAAAGGGAAAAGAATACCAAGCCCTCCTACAGTGATATTGCAGCCAATCCAAAGGTATTAAAATGGATGACAGAGCTCACCAAACTGCGGAAGCAAATTAAAGATGCAAAACCCAAAAGCTCTGATGGAGAGTTTGTACCTCAGACCCGTCCACGGAGTAACACTCTTCCAAAAAGTTTTGGGTCTTCTCTAGACCATGAAGGTGAAGCAAGTGAGGATGAATCCAGAACCATTCAGAAGGAGAAAAAACCATCTAAAGAAGCAACCCTTGAATTTATTTTGAAAAAACTGAAGGAAAAACGTGTTGAGAGATGTCTCCCAGAAGATATCAAGAAAATGACAAAAGATCATTTGGTAGAAGAGAAAACTTCTCTCCAGAAAAGTCTTCTTTACTACGAAAGTCAACATGGAAGGCCGGTGACAAGGGAAGAAAGGCACATTGTTAAACCTCTGTATGATAGATACAGGCTTGTAAAACAGATGCTGACAAGAGCTAGCATCACTCCTCTCCTTGGATCTCCCTCCACCAAAAGAAGAGGTCAGATGTTACAACCAATCATAGAAGGAGAAACTGCCCATTTTTTTGAAGAAATCAAGGAAGAAGAAGAAGATGGTATTAGTCTGTCCTCCGAATTAAATGATATCTTGAAAACAGCTATACAGGCACAGTCTTCATTGGAAAACTCAGAATCTGATATTGAAGAAAATCAAAAACTGGCTCTGGATCTCCGATTGTCAAGTACTCGAGCAGCTTCTATGCCTGAATTACTGGAACAACTTTGGAAAGCTAGAGCTGAAAAAAAGAAACTACGTAAAACATTACGGGAATTTGAAGAAGCATTTTATCAACAAAATGGAAGGAATGCCCAGAAAGAGGATCGTGTTCCAGTGCTTGAGGAATACAGAGAGTACAAGAAAATTAAAGCTAAGCTTAGGCTTCTTGAAGTTCTTATCAGCAAACAAGATTCTTCGAAATCCATATAA

Related Sequences

XP_004841855.1 Protein

Fam13b PREDICTED: protein FAM13B isoform X6 [Heterocephalus glaber]

Length: 915 aa      View alignments
>XP_004841855.1
MRKSSSPSLSNCNSVLANKIFGIPLDELQQGGHPDNEVPFIVRHVVDYIEEHGGLEQQGLFQVNGNAETVEWLRQRYDSGEEVDLVKEADVPSAISLLRFFLQELPEPVIPGSLHIHLMHLSQDYNNEDEFGRKLRFLLQQLPPVNYSLLKFLCRFLANVASHHEEIWSANSLAAVFGPDVFHIYTDVEDMKEQEIVSRIMAGLLENYYEFFENEEEDFSSNDLSSITEQAGSNILYKLESREQGFHEALEKGLTAVKERRDVNDLSEEEEDEKLERIEELLEEGAEKSDNMPEVVQLRMTENILESNSVIASTSAHISPTSILPASAEVDTADGIINASDSNKECSEPVAGANLDSEVMQQDTIFEDEENQSAGVLLEPCSDHGDAEDSCPERKEYLVFDSDKLSRLFLESSSKICDLNANTESEVPRGQSVGVQGEAACIQIPHLDLKNASDGDRWEVPCPITFPLIDFKTMHLQRDGEEPFPAFKSWQEDSESGEAQLSPQAGRMNHHPLEEDCPPVLSHRSLDFGQSQRFLHDPETLNSSSKALSYARIRRSSFSSKDEKREDKTPYQLVKKLQKKIRQFEEQFEREKNTKPSYSDIAANPKVLKWMTELTKLRKQIKDAKPKSSDGEFVPQTRPRSNTLPKSFGSSLDHEGEASEDESRTIQKEKKPSKEATLEFILKKLKEKRVERCLPEDIKKMTKDHLVEEKTSLQKSLLYYESQHGRPVTREERHIVKPLYDRYRLVKQMLTRASITPLLGSPSTKRRGQMLQPIIEGETAHFFEEIKEEEEDGISLSSELNDILKTAIQAQSSLENSESDIEENQKLALDLRLSSTRAASMPELLEQLWKARAEKKKLRKTLREFEEAFYQQNGRNAQKEDRVPVLEEYREYKKIKAKLRLLEVLISKQDSSKSI