Details from NCBI annotation

Gene Symbol Gin1
Gene Name gypsy retrotransposon integrase 1, transcript variant X2
Entrez Gene ID 101718518

Database interlinks

Part of NW_004624743.1 (Scaffold)

For more information consult the page for NW_004624743.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GIN1 ENSCPOG00000021790 (Guinea pig)

Gene Details

gypsy retrotransposon integrase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018090, Guinea pig)

Protein Percentage 92.71%
CDS Percentage 92.13%
Ka/Ks Ratio 0.11317 (Ka = 0.0335, Ks = 0.2956)

GIN1 ENSG00000145723 (Human)

Gene Details

gypsy retrotransposon integrase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000381970, Human)

Protein Percentage 88.1%
CDS Percentage 91.3%
Ka/Ks Ratio 0.24556 (Ka = 0.0592, Ks = 0.241)

Gin1 ENSMUSG00000026333 (Mouse)

Gene Details

gypsy retrotransposon integrase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000108464, Mouse)

Protein Percentage 82.63%
CDS Percentage 84.11%
Ka/Ks Ratio 0.1947 (Ka = 0.1028, Ks = 0.5278)

Gin1 ENSRNOG00000011962 (Rat)

Gene Details

gypsy retrotransposon integrase 1 (Gin1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016028, Rat)

Protein Percentage 80.89%
CDS Percentage 80.89%
Ka/Ks Ratio 0.15247 (Ka = 0.1147, Ks = 0.7524)

Genome Location

Sequence Coding sequence

Length: 1566 bp    Location: 21236855..21217215   Strand: -
>XM_004841742.1
ATGGTCCGTAGTGGAAAAAATGGTGACCTTCATCTTAAACAGATTGCATATTATAAACGAACTGGTGAATATCATGCAACTACACTGCCAAGTGAGAGAAGTGGTATAAGAAGAGCAGCAAAAAAGTTTGTCTTCAAAGAAAAACAGCTATTCTACGTTGGAAAAGACAGAAAACAAAATCGTTTGGTAATTGTTTCAGAAGAGGAAAAAAATAAAGTCCTAAGAGAATGCCATGAAAATGATGCTGGAGCTCATCACGGCATATCCAGAACACTCACTCTAGTGGAATCTAATTACTATTGGACTTCTGTGACCAATGATGTCAAACAGTGGGTATATGCTTGTCAGCATTGCCAAGTGGCAAAAAATACAGTTATTCTAGCACCTAAACAGCACCTTCTCAAGGTGGAAAATTCATGGAGTATAGTTACTGTGGATCCGATGGGACCTTTTCATGCAAGCAACAGAAGTCATGTGTATGCTATAATTTTGACAGATTTGTTCACAAAATGGGTTATGATTTTGCCTCTATGTGATGTTTCAGCGTCAGAAATTTCTAAAGCTATTACCAATGTATTTTTCTTATATGGACCTCCTCAGAAAATAATAATGGACCAAAGAGACGAATTCATTCAACAGATCAATGTAGAACTGTATGGATTGTTTGGTACAAAAGAGATTGTAATTTCTCATGCTGCTGGAACTGTTAATCCAACTGAAAGTACACCTAGAACAATCAAAGCATTTCTCTCCAAACACTGTGCCGACCACCCAGAGAACTGGGATGAACACTTATCAGCTGTTTCCTTTGCCTTCAATGCAACTCACTTGGAGCCTGCTAAAAATACACCATATTTTCAAATGTTTAATCGAAATCCTTATATTCCAAAGACTTCAGATACTCTTCATGAAATGGATGCTGATAATACAAGTATGTTTGCCAGAATTCTAGATGCATTTAAAGAAGCTGAAAAAATAATGGAGGCAAAGACAACTTCAATGGGCCAGGTGGAGAACCATTTGAATGGACTACATAAAAACAAGATCATTGTTAAAAAGAAACCAAAGCAGTTAAATCCATTTCATTTAAAAGTGGGTCATGAGGTTTTAAGACAAAGGAAAAATCGGTGGAAAGATGGTCGTTTCCAGTCCGAATGGATTGGTCCTTGTGTCATAGACTATATTACAGAAAGTGGCTGTGCTGTCCTGAGAGACAATACGGGGACTAGGCTTAAACGACCTATCAAAATGTCCCACCTTAAGCCTTATGTAAGAGAATCCAGTGAACAAGATAGTCTTTATCTCTTGCAAGGTTCTATAGTGGCAGATCATGACTACATTGGATTGCCTGAAATTCCAGTTGGAACACACCAAGCAAATATCCTGGTAGAAGATGCAACTGTTGGCGTAGTTGATAATGAGTTACTGACATCAAGCAAGGAGCATGAACTGTTAGAGTATAGAAATCCCAAAACCTCTTCATTGATAGAAGATCATGGTACTCTTGAAAAGCAGACTTTCAGTCTGTTGGACTCTTCAAACCAAGTCCTTGAATACTTAAGTTAG

Related Sequences

XP_004841799.1 Protein

Gin1 PREDICTED: gypsy retrotransposon integrase-like protein 1 isoform X2 [Heterocephalus glaber]

Length: 521 aa      View alignments
>XP_004841799.1
MVRSGKNGDLHLKQIAYYKRTGEYHATTLPSERSGIRRAAKKFVFKEKQLFYVGKDRKQNRLVIVSEEEKNKVLRECHENDAGAHHGISRTLTLVESNYYWTSVTNDVKQWVYACQHCQVAKNTVILAPKQHLLKVENSWSIVTVDPMGPFHASNRSHVYAIILTDLFTKWVMILPLCDVSASEISKAITNVFFLYGPPQKIIMDQRDEFIQQINVELYGLFGTKEIVISHAAGTVNPTESTPRTIKAFLSKHCADHPENWDEHLSAVSFAFNATHLEPAKNTPYFQMFNRNPYIPKTSDTLHEMDADNTSMFARILDAFKEAEKIMEAKTTSMGQVENHLNGLHKNKIIVKKKPKQLNPFHLKVGHEVLRQRKNRWKDGRFQSEWIGPCVIDYITESGCAVLRDNTGTRLKRPIKMSHLKPYVRESSEQDSLYLLQGSIVADHDYIGLPEIPVGTHQANILVEDATVGVVDNELLTSSKEHELLEYRNPKTSSLIEDHGTLEKQTFSLLDSSNQVLEYLS