Details from NCBI annotation

Gene Symbol Lysmd3
Gene Name LysM, putative peptidoglycan-binding, domain containing 3
Entrez Gene ID 101722030

Database interlinks

Part of NW_004624743.1 (Scaffold)

For more information consult the page for NW_004624743.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LYSMD3 ENSCPOG00000007834 (Guinea pig)

Gene Details

LysM, putative peptidoglycan-binding, domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007055, Guinea pig)

Protein Percentage 89.51%
CDS Percentage 90.16%
Ka/Ks Ratio 0.16575 (Ka = 0.0503, Ks = 0.3037)

LYSMD3 ENSG00000176018 (Human)

Gene Details

LysM, putative peptidoglycan-binding, domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000314518, Human)

Protein Percentage 86.27%
CDS Percentage 88.13%
Ka/Ks Ratio 0.14826 (Ka = 0.064, Ks = 0.4315)

Lysmd3 ENSMUSG00000035840 (Mouse)

Gene Details

LysM, putative peptidoglycan-binding, domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000038275, Mouse)

Protein Percentage 80.0%
CDS Percentage 83.39%
Ka/Ks Ratio 0.18456 (Ka = 0.1045, Ks = 0.566)

Lysmd3 ENSRNOG00000016298 (Rat)

Gene Details

LysM, putative peptidoglycan-binding, domain containing 3 (Lysmd3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021818, Rat)

Protein Percentage 81.0%
CDS Percentage 81.56%
Ka/Ks Ratio 0.13401 (Ka = 0.1002, Ks = 0.7475)

Genome Location

Sequence Coding sequence

Length: 921 bp    Location: 9778628..9769754   Strand: -
>XM_004841677.1
ATGGCAGGGAGGCATCAGAATCACAGTTTTCCTCTCCCTGGAGTGCAGTCCAGTGGTCAAGTACATGCTTTTGGAAATTGTACAGACAGTGATATTTTGGAGGAGGATGCGGAAGTGTATGAGCTTCGATCCAGAGGAAAAGAGAGAGTCCGAAGAAGTACATCAAGAGATAGACTTGATGACATTATTTTATTAACGAAAGACATACAGGAAGGAGACACTTTAAATGCAGTAGCCCTTCAGTACTGTTGCACGGTAGCAGATATCAAGAGAGTTAACAATCTCATCAGCGATCAAGACTTTTTTGCCCTTAGAGCTATCAAAATTCCAGTTAAAAAGTTTAGTTCATTGACTGAATCACTATATGCTCCAAAAGGAAGACAGGCTTCACGTCCTTCAGCTGTTCAGTACGCTCCAGAACAACAGGAAATCCTGCCAGCAAATGACTGTCTTTCTTCCAATGAGTCGGCTGGTAGCTTTTTAAAAGAAGTTGATCGAGACATAGAACAAATAGTGAAGTGTACAGACACCAAGAAGGAGAACCTTAATGAGGTAGTGTCTGCCTTAACTTCACAACAGATCCGTTTTGAGCCTGATAACAAAAACACAAAACTTAAGGATCCCTATTACGGAGCAGATTGGGGAATAGGGTGGTGGACAGCTGTAGTGATAATGTTGATAGTAGGTATAATAACACCAGTATTTTACTTGCTGTACTATGAAATTTTAGCTAAAGTGGACGTTAGTCACCATTCAACAGTGGACTCTTCACATTTGCATTCAGAAATCACACCATCATCCCAGTACAGGGAAATGGAAAATGGCATTGCTCCCACCAGAGGAATCCATGTTGGCCAACAAGATGGCCACAGACTGTACGGTGAAGATCCTCAGCCAGCTGCTGCTCGACACAAAACATAG

Related Sequences

XP_004841734.1 Protein

Lysmd3 PREDICTED: lysM and putative peptidoglycan-binding domain-containing protein 3 [Heterocephalus glaber]

Length: 306 aa      View alignments
>XP_004841734.1
MAGRHQNHSFPLPGVQSSGQVHAFGNCTDSDILEEDAEVYELRSRGKERVRRSTSRDRLDDIILLTKDIQEGDTLNAVALQYCCTVADIKRVNNLISDQDFFALRAIKIPVKKFSSLTESLYAPKGRQASRPSAVQYAPEQQEILPANDCLSSNESAGSFLKEVDRDIEQIVKCTDTKKENLNEVVSALTSQQIRFEPDNKNTKLKDPYYGADWGIGWWTAVVIMLIVGIITPVFYLLYYEILAKVDVSHHSTVDSSHLHSEITPSSQYREMENGIAPTRGIHVGQQDGHRLYGEDPQPAAARHKT