Details from NCBI annotation

Gene Symbol Hapln1
Gene Name hyaluronan and proteoglycan link protein 1, transcript variant X5
Entrez Gene ID 101711003

Database interlinks

Part of NW_004624743.1 (Scaffold)

For more information consult the page for NW_004624743.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HAPLN1 ENSCPOG00000011680 (Guinea pig)

Gene Details

hyaluronan and proteoglycan link protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010506, Guinea pig)

Protein Percentage 92.66%
CDS Percentage 91.05%
Ka/Ks Ratio 0.08349 (Ka = 0.035, Ks = 0.4194)

HAPLN1 ENSG00000145681 (Human)

Gene Details

hyaluronan and proteoglycan link protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000274341, Human)

Protein Percentage 92.09%
CDS Percentage 83.62%
Ka/Ks Ratio 0.03905 (Ka = 0.0383, Ks = 0.9819)

Hapln1 ENSMUSG00000021613 (Mouse)

Gene Details

hyaluronan and proteoglycan link protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022108, Mouse)

Protein Percentage 91.53%
CDS Percentage 83.05%
Ka/Ks Ratio 0.03826 (Ka = 0.0422, Ks = 1.1026)

Hapln1 ENSRNOG00000032002 (Rat)

Gene Details

hyaluronan and proteoglycan link protein 1 (Hapln1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000045959, Rat)

Protein Percentage 90.4%
CDS Percentage 83.43%
Ka/Ks Ratio 0.04821 (Ka = 0.0465, Ks = 0.965)

Genome Location

Sequence Coding sequence

Length: 1065 bp    Location: 3819471..3791797   Strand: -
>XM_004841649.1
ATGAAGAGCCTGCTTCTTCTGGTGCTGATTTCCATCTGCTGGGCCGATCATCACTTAGACAACTACACTCTGAACCATGACAGAGTTATTCACATCCAAGTAGAAAATGGCCCCCGTCTGGTCGTACAAGCGGAACAAGCCAAGGTCTTCTCCCACAGAGGCGGCAACGTCACACTGCCATGTAAATTTTATCGAAACCCCTCAACTTTTGGCTCAGGACTCCACAAGATCCGAATTAAGTGGACCAAGCTAACTTCAGATTACCTCAAGGAAGTGGATGTTTTTGTGTCCATGGGCTACCATAAGAAAACCTATGGAGGCTACCAGGGGAGAGTGTTCCTGAAGGGAGACAGTGACAATGACGCCTCTCTAGTCATCACGAACCTCGCCCTGGAGGATTATGGAAGGTACAAGTGTGAGGTGATCGAAGGCTTAGAAGATGACACTGCCGTGGTCACCTTAGACTTGCAAGGTGTGGTCTTCCCTTACTTCCCGAGACTGGGGCGCTACAACCTGAACTTCCACGAGGCACAGCAAGCCTGCCTGGCCCAGGACGCCGTAATCGCCTCCTTCGACCAGCTCTACGAGGCCTGGCGCGGCGGGCTGGACTGGTGCAACGCGGGCTGGCTGAGCGATGGCTCGGTGCAGTACCCCATCACCAAGCCCCGTGAGCCCTGCGGGGGCCAGAACACCGTGCCTGGCGTCCGCAACTACGGTTTCTGGGACAAGGACAAGAGCAGATACGACGTGTTCTGCTTCACCTCCAACTTCAACGGCCGGTTCTACTACCTGATCCACCCCACCAAGCTCACCTACCACGAGGCGGCGCAGGCCTGTGCCAACGACGGCGCTCAGATCGCCAAAGTGGGCCAGATCTTCGCCGCCTGGAAGCTGCTGGGCTACGACCGCTGCGACGCGGGCTGGCTGGCGGACGGCAGCGTGCGCTACCCCATCTCCCGGCCGCGGCGGCGCTGCAGCCCCAGCGAGGCGGCCGTGCGCTTCGTGGGCTTCCCGGACAAGAAGCACCAGCTGTTCGGCGTCTACTGCTTCCGGGCCTACGACTGA

Related Sequences

XP_004841706.1 Protein

Hapln1 PREDICTED: hyaluronan and proteoglycan link protein 1 isoform X5 [Heterocephalus glaber]

Length: 354 aa      View alignments
>XP_004841706.1
MKSLLLLVLISICWADHHLDNYTLNHDRVIHIQVENGPRLVVQAEQAKVFSHRGGNVTLPCKFYRNPSTFGSGLHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYQGRVFLKGDSDNDASLVITNLALEDYGRYKCEVIEGLEDDTAVVTLDLQGVVFPYFPRLGRYNLNFHEAQQACLAQDAVIASFDQLYEAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQNTVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYHEAAQACANDGAQIAKVGQIFAAWKLLGYDRCDAGWLADGSVRYPISRPRRRCSPSEAAVRFVGFPDKKHQLFGVYCFRAYD