Details from NCBI annotation

Gene Symbol Atg10
Gene Name autophagy related 10, transcript variant X4
Entrez Gene ID 101707298

Database interlinks

Part of NW_004624743.1 (Scaffold)

For more information consult the page for NW_004624743.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATG10 ENSCPOG00000013428 (Guinea pig)

Gene Details

autophagy related 10

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012090, Guinea pig)

Protein Percentage 78.95%
CDS Percentage 82.78%
Ka/Ks Ratio 0.37885 (Ka = 0.1452, Ks = 0.3832)

ATG10 ENSG00000152348 (Human)

Gene Details

autophagy related 10

External Links

Gene Match (Ensembl Protein ID: ENSP00000282185, Human)

Protein Percentage 79.36%
CDS Percentage 82.57%
Ka/Ks Ratio 0.29013 (Ka = 0.1342, Ks = 0.4627)

Atg10 ENSMUSG00000021619 (Mouse)

Gene Details

autophagy related 10

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022119, Mouse)

Protein Percentage 76.78%
CDS Percentage 76.46%
Ka/Ks Ratio 0.16405 (Ka = 0.1589, Ks = 0.9688)

Atg10 ENSRNOG00000016342 (Rat)

Gene Details

autophagy related 10 (Atg10), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021942, Rat)

Protein Percentage 75.59%
CDS Percentage 76.84%
Ka/Ks Ratio 0.1892 (Ka = 0.1623, Ks = 0.858)

Genome Location

Sequence Coding sequence

Length: 723 bp    Location: 2381417..2649891   Strand: +
>XM_004841637.1
ATGGAAGAAGATGAGTTCTTGGAAGAAAAAACATTCCAGCATTATTGTGCAGAATTCATTAAACATTCACAACAGATAGGCGATGGTTGGGAATGGAAAACATCAAAGGACTATTCTGACGGCTACATGTACAAGACGTGCTTCCAGGCCAACGAGATGGCAGGGGCGTGTCCAGGAACCTGCGCCGATGTACAGACATGGCTTCCCACGGAGGAGGCCTTAGACCTACCCTCGGATGATTTGGAAGTGATTGAGACCCAGGCAGCATCTGAAGTGGTTAAATATGAGTATCACGTCTTATATTCCTGTAGCTACCAAGTGCCTGTACTGTACTTCAGAGCAAGCTTTTTAGATGGGAGGCCACTCACCCTGCAGGACATCTGGAACGGAGTCCACGAGTCCTATAAGACGAGGCCGCTCCAGGGGCCGTGGGACACAATCACTCAACAGGTGCACTTGGAGGAAACACTTGAGAAAATAGATATTGGAGCTCTATACATGGACACAGAAAGAATGGAACATCCAATACTAGGACAACCCTTTTTTGTACTTCACCCTTGCAAGACCACTGAATTCATGGCTCCAGTATTAAAGAATTCCCAGAAAATCAATAGAACCGTCAACTACATCACATCATGGCTGAGCATTGTGGGGCCGGCTGTGGGGCTGAATCTACCTCTGAGTTATGCCAAGGCCACCTCTCGTGATGAAGATGCTGACTGA

Related Sequences

XP_004841694.1 Protein

Atg10 PREDICTED: ubiquitin-like-conjugating enzyme ATG10 isoform X4 [Heterocephalus glaber]

Length: 240 aa      View alignments
>XP_004841694.1
MEEDEFLEEKTFQHYCAEFIKHSQQIGDGWEWKTSKDYSDGYMYKTCFQANEMAGACPGTCADVQTWLPTEEALDLPSDDLEVIETQAASEVVKYEYHVLYSCSYQVPVLYFRASFLDGRPLTLQDIWNGVHESYKTRPLQGPWDTITQQVHLEETLEKIDIGALYMDTERMEHPILGQPFFVLHPCKTTEFMAPVLKNSQKINRTVNYITSWLSIVGPAVGLNLPLSYAKATSRDEDAD