Details from NCBI annotation

Gene Symbol Hfm1
Gene Name HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)
Entrez Gene ID 101700497

Database interlinks

Part of NW_004624742.1 (Scaffold)

For more information consult the page for NW_004624742.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HFM1 ENSCPOG00000007421 (Guinea pig)

Gene Details

HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006694, Guinea pig)

Protein Percentage 86.84%
CDS Percentage 91.39%
Ka/Ks Ratio 0.3607 (Ka = 0.0705, Ks = 0.1956)

HFM1 ENSG00000162669 (Human)

Gene Details

HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000359454, Human)

Protein Percentage 83.59%
CDS Percentage 89.42%
Ka/Ks Ratio 0.32015 (Ka = 0.0845, Ks = 0.2638)

Hfm1 ENSMUSG00000043410 (Mouse)

Gene Details

HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000108310, Mouse)

Protein Percentage 76.45%
CDS Percentage 82.74%
Ka/Ks Ratio 0.27406 (Ka = 0.139, Ks = 0.507)

Hfm1 ENSRNOG00000023299 (Rat)

Gene Details

HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) (Hfm1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034409, Rat)

Protein Percentage 74.96%
CDS Percentage 80.95%
Ka/Ks Ratio 0.25126 (Ka = 0.1498, Ks = 0.5963)

Genome Location

Sequence Coding sequence

Length: 4251 bp    Location: 6394841..6512448   Strand: +
>XM_004841567.1
ATGCTAAAATCAAATGACTGCTTGTTTCCTGTGGATAATCTGTTTTTCGAAAAAGATAAAGTTGAAAACTTTCCAGATGATAAAAAATTGTTGGATTGGTTTCTCCCCCCTGCTCCATTGATTTCAGAAATTCCAGATACTCAGAACTTAGAGGAAGAAATAGAAAGTCATAAACTGTTAGGTCAGGCAAAGAAGCCAACATTGTTAACATCAAATTTAAAGATTACCAATGGAGACACAAATTATATTTTGCCAACACAAAAATTCAAATTTACCTCTAATAAATATGAACAAGATTATCTAAATTTAGGACAAATAGATAAGACTGACTTATCACATGTTTCTGAAAAGCTGACATATGGGTCTTATCAGATACATAAAAATCACATGGGCAGTGAGATAGTACCTGAAATAAATGTTCCTGATGATACAAAATTAGTTAATATTATAGAAGATAAAGGAGAAAGCACATCGGCATTCCGAAAAAGGTTATTTAAAATATGTGACAATATACATGAAAGTGCTTATTCTAATGACAGTGCAAACATGGATTCTCACATTGGCTCAGTGAAAATTTTCCAAACAGGAATGAACAAAGGGGAACCGTGGAACTATAGCAATAATAACCAGAAACCTCAGTATTGTTCAAACATGTTTAAAGCTAATGATGCTTTTCCTGGTTCTGAAATTGGAGGAGATACGTTCAAAGTGCCATCTTTTTCAGTTGGATCCCAGCTTTATGATAGCCAAGGGATAACCAAAACTGGCTTAGGTTCCTTGAAGGCTGTCACAGAAATACCGGCAAAATTTAGAAGTATTTTCAAAGAATTTCCATATTTCAACTATATACAGTCTAAAGCCTTTGATGATCTTCTTTACACAGATAGGAATTTTGTGATTTGTGCTCCAACTGGTTCTGGGAAAACTGTAGTGTTTGAACTAGCTATAACAAGATTGTTAATGGAAGTACCATTGCCATGGTTGAATATTAAAATTGTTTACATGGCACCAATAAAAGCCCTGTGTAGTCAGCGTTTTGATGACTGGAAAGAGAAATTTGGACCAATAGGATTGAATTGTAAAGAACTCACTGGAGATACAGCCATGGATGATTTATTTGAGATTCAACATGCTCATATTATTATGACAACTCCAGAAAAATGGGACAGCATGACTAGGAAATGGAGAGACAACTCTTTAGTCCAACTAGTTCGACTAATTCTCATTGATGAGGTACATGTTGTAAAAGATGAAAATCGTGGACCAACACTTGAAGTTGTAGTCAGCAGGATGAAAACCGTACAGTCTTTATCTCTTCCTTTAGAAAATACTAGTAATAGTGTTCCAGTGAGATTTGTAGCAGTGTCTGCAACAATTCCAAATGCTGAGGATGTAGCAGAATGGCTTTCAGATGGTAAAAGACCTGCTGTATGTCTGAAAATGGATGAGAGCCATAGACCGGTGAAACTTCGGAAAGTAGTCCTGGGATTTCCCTGCAGTAGTAACCAAACTGAATTTAAGTTTGATTTAACCCTCAACTACAAAATTGCCAGTGTTATACAAACATACTCTGATCAGAAACCTACACTTGTGTTTTGTGCAACAAGGAAAGGTGTGCAACAAGCTGCTTCTGTTCTTGTGAAAGATGCTAAATTTATTATGACTGTGGAACAGAAACAAAGGTTACAGAAATATGCATATTCTGTAAGAGATTCAAAACTCAGAGATATCTTAATATATGGTGTTGCTTATCACCATGCTGGTATGGAGCTATCAGATAGAAAAGTAGTTGAAGGAGCTTTTACTATTGGAGATCTACCAGTTCTTTTTACTACCAGTACTTTAGCTATGGGAGTAAATTTGCCTGCTCATCTAGTAGTTATAAAATCTACAATGCATTATGTTGGAGGAATGTTTGAAGAGTACAGTGAAACAGATATTCTCCAGATGATTGGGAGAGCAGGTCGACCTCAATTTGACACTACAGCTACTGCAGTTATTATGACTCGGTTAAGTACAAAAGAGAAATACATTCAGATGTTAGCTTGTAGTGACACTGTAGAAAGCAGCTTGCACAGACATCTTATCGAACATTTAAATGCAGAGATAGTATTGCACACCATCACAGACGTGAATATTGCTTTGGAATGGATACGGTCAACCTTGCTTTATATCAGAGCTTTGAAAAACCCAACTCATTATGGTTTTACATCTGGATTGAACAAAGATGGAATTGAAGCAAAATTACAAGAATTGTGTTTGAAGAATCTGAATGATTTATCATCCTTGGACTTGATAAACATGGATGGAGAGGTTAATTTCAAACCAACAGAGGCAGGAAGGTTAATGGCTTGGTATTATATTACATTTGAAACAGTGAAGAAATTTTCCACAATGAGCGGAGAAGAAACTTTATCAGATCTGGTTGCAATGATAGCCAGCTGCAATGAATTTCTAGATGTACAATTAAGGATAAATGAAAAGAAAACACTGAATATGTTGAACAAAAGTCCAAATCGGATGACTATCAGTCTTATTCAGGCTCAGCTAGGATGCATTCCCATACAAGATTTTGCTTTGACACAAGACATCTCAAAGATTTTCAGAAGTGGCTCACGAATCACAAGATGGTTATCAGACTTTGTGGCTGGTCAGGAAAAGAAGTTTGCTGCATTATTGAATAGTTTGATTTTAACTAAATGTTTTAGGTGTAAACTTTGGGAAAACTCTCTTTATGTATCCAAACAACTAGAAAAAATCGGTATAACATTGTCAAATGCCATGGTAAATGCAGGTTTGACATCCTTTAAGAAAATAGAAGAAACAGATGCAAGGGAACTTGAACTGATTTTAAACAGATATCCCCCTTTTGGGACCCAGATAAAAGAAGCTGTGATATATCTGCCAAAATATGAACTTGAAGTAGAACAGATTGCAAGATATAGTGATACCAAGGCAGAAATATTGGTGACTGTTATATTAAGAAACTTTGAACAGCTACGGATTAAAAGAACGACACCAAATTCTCACTATACTACCTTAATCATAGGTGATGCAGATAATCAAGTGGTTTTTAAGCAAAAAATTATTGATTCTGTTTTGCTAAAAGCTGGAAATTGGATGAAAAAGATTGATGTGAGGAGAGCTCTTATATCTGAAGATCTTAGCATAAATCTAATTAGCTCTGATTTGGTTGGACTTGATATTCAGCAGAAATTTACAGTCTTTTACTCAGGACCCAGGTGGTTTGGAAATCAAATCATTGTACAAAGAAAATCAGAAACAGAGATTTCCCATTCTAAATATCCAGATAGATCTACTGTAGCAGAACCTAATAAAGGAATAACTGCATGCAAAAAACCTGGGAACAGAGAATGCAATCATCGTTGTAAAAATAAACATAGATGTGGACATGATTGCTGTAAAACTGGAATTGCGCAGAAGTCAGAAATTAAAGAGACAATTTCTTCATATTTATCTGATTTAAGAAACAGGAATGCTGTTTCATCTCTTCCTCCAGTTAAACGTCTCAAGATACAGATGAATAAATCTCAAAGTGTGGACCTTAAAGAGTTTGGTTTTACTTCAAAGCCTTCCCTTCCCAGTATATCAAGGTCAGAATATTTGAACATGTCTGAATTGCCTATAATGGAGCAGGGGAATCAACATGAACTCTATGGGAAAGTTCAAGAAGAACTATCTGAATATCAAGGCAAAGAAGGTTTGCATGTGAACTTTGAATTGGGAGATGAAGTCTGGGAGGATTTTGATGATGAAAACTTAATAGAAGTTACTAGCTCAACTGATACTGAGAAGACAACGACATCAGGATTTGGAAACACTTTGAGTTCAAGTACCAGGGGAAGTAAGTTACCCCTCCAAAAGCCAAAGAGCAAATTCCAAAGAGAAATGTCAAACAGTTTTGTTTCATCACATGAAAAGCCAGATACTTATTTATCAGATTCTGCTATGGACAAATTCGGTTCATCCTTCCTGACACAATTATCTGAACAAGCTGAAAATGCAAATACCGTCCATTTACAAGAGAGAAAACAACAAAATATGTCACCAGTAATTGAGAGGTTATACTTTCCTCACTCCAAAAAAAATCCAAAATCTTCAAATGTTATGGAAGTGGATTCTGTTATTAGAAACAGCAACTCTAAAAAGAAAACTGATTTTAGGTATCATCCTGATGATGAAGCTAATGAAATAAAGTCTTTTCTGGGAATATTTGATGGTATTTTCTAA

Related Sequences

XP_004841624.1 Protein

Hfm1 PREDICTED: probable ATP-dependent DNA helicase HFM1 [Heterocephalus glaber]

Length: 1416 aa      View alignments
>XP_004841624.1
MLKSNDCLFPVDNLFFEKDKVENFPDDKKLLDWFLPPAPLISEIPDTQNLEEEIESHKLLGQAKKPTLLTSNLKITNGDTNYILPTQKFKFTSNKYEQDYLNLGQIDKTDLSHVSEKLTYGSYQIHKNHMGSEIVPEINVPDDTKLVNIIEDKGESTSAFRKRLFKICDNIHESAYSNDSANMDSHIGSVKIFQTGMNKGEPWNYSNNNQKPQYCSNMFKANDAFPGSEIGGDTFKVPSFSVGSQLYDSQGITKTGLGSLKAVTEIPAKFRSIFKEFPYFNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITRLLMEVPLPWLNIKIVYMAPIKALCSQRFDDWKEKFGPIGLNCKELTGDTAMDDLFEIQHAHIIMTTPEKWDSMTRKWRDNSLVQLVRLILIDEVHVVKDENRGPTLEVVVSRMKTVQSLSLPLENTSNSVPVRFVAVSATIPNAEDVAEWLSDGKRPAVCLKMDESHRPVKLRKVVLGFPCSSNQTEFKFDLTLNYKIASVIQTYSDQKPTLVFCATRKGVQQAASVLVKDAKFIMTVEQKQRLQKYAYSVRDSKLRDILIYGVAYHHAGMELSDRKVVEGAFTIGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYVGGMFEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTKEKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITDVNIALEWIRSTLLYIRALKNPTHYGFTSGLNKDGIEAKLQELCLKNLNDLSSLDLINMDGEVNFKPTEAGRLMAWYYITFETVKKFSTMSGEETLSDLVAMIASCNEFLDVQLRINEKKTLNMLNKSPNRMTISLIQAQLGCIPIQDFALTQDISKIFRSGSRITRWLSDFVAGQEKKFAALLNSLILTKCFRCKLWENSLYVSKQLEKIGITLSNAMVNAGLTSFKKIEETDARELELILNRYPPFGTQIKEAVIYLPKYELEVEQIARYSDTKAEILVTVILRNFEQLRIKRTTPNSHYTTLIIGDADNQVVFKQKIIDSVLLKAGNWMKKIDVRRALISEDLSINLISSDLVGLDIQQKFTVFYSGPRWFGNQIIVQRKSETEISHSKYPDRSTVAEPNKGITACKKPGNRECNHRCKNKHRCGHDCCKTGIAQKSEIKETISSYLSDLRNRNAVSSLPPVKRLKIQMNKSQSVDLKEFGFTSKPSLPSISRSEYLNMSELPIMEQGNQHELYGKVQEELSEYQGKEGLHVNFELGDEVWEDFDDENLIEVTSSTDTEKTTTSGFGNTLSSSTRGSKLPLQKPKSKFQREMSNSFVSSHEKPDTYLSDSAMDKFGSSFLTQLSEQAENANTVHLQERKQQNMSPVIERLYFPHSKKNPKSSNVMEVDSVIRNSNSKKKTDFRYHPDDEANEIKSFLGIFDGIF