Details from NCBI annotation

Gene Symbol Rpap2
Gene Name RNA polymerase II associated protein 2
Entrez Gene ID 101698319

Database interlinks

Part of NW_004624742.1 (Scaffold)

For more information consult the page for NW_004624742.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RPAP2 ENSCPOG00000007163 (Guinea pig)

Gene Details

RNA polymerase II associated protein 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006460, Guinea pig)

Protein Percentage 80.48%
CDS Percentage 86.86%
Ka/Ks Ratio 0.38719 (Ka = 0.1131, Ks = 0.2921)

Rpap2 ENSMUSG00000033773 (Mouse)

Gene Details

RNA polymerase II associated protein 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000070209, Mouse)

Protein Percentage 68.16%
CDS Percentage 76.34%
Ka/Ks Ratio 0.32475 (Ka = 0.211, Ks = 0.6496)

Rpap2 ENSRNOG00000023484 (Rat)

Gene Details

RNA polymerase II associated protein 2 (Rpap2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002815, Rat)

Protein Percentage 68.97%
CDS Percentage 75.89%
Ka/Ks Ratio 0.29585 (Ka = 0.2098, Ks = 0.7092)

Genome Location

Sequence Coding sequence

Length: 1818 bp    Location: 5434884..5339606   Strand: -
>XM_004841564.1
ATGGCTGACTTCGCAGGGCAGCTTCCCGTGGGCCTCACGACCCGGCCTGCCCCCGCCTCCCGGAAGGCTACAGGTACTAAACAAACAAGTGGCTTGAGACAAGATGCTTCTAAAAGGAAAGCAGAACTAGAAGCATCTGTGAAAAAGAAGATTGAGTGTGAAAGAAAAGCTCTACATTTTGTTGAACAACTGTTAGAAGAGAATATCACAGAAGACTTCTTAATGGAATGTGGGAAGTTCATCACCCCTGCTCACTATAGTGATGTTGTGGTTGAACGTTCAATTATCAAATTCTGTGGCTATCCTTTGTGTCAGAAAAAACTGGGCATCGTACCAAAACAGAAATATAAAATTTCTACCAAAACCAATAAAGTTTATGATATTACTGAAAGAAAGTCTTTTTGCAGCAGTTTTTGTTACAAAGCATCTAAGTTTTTTGAAGCACAGATTCCCAAAACTCCAGTATGGGTTCGAGAAGAAGACAGACAACCTGATTTTCAGCTGCTAACAGAAGGACAAAGTTGCCATTCTGGAGAAGAAGTACAGTTACACAGTAAAGTCATTAAAACATCAGATATTGATAATCCTGCTCATTTTGAAAAGCAATATGAATCTAGTTCTTCTAGCACTTGTGGTGATAGTAGCAGTGATAATGAACAAGACTTTGTTTCCTCCATTCTACCGGGAAAGAGACCAAATGCAACGGGTATGGGGCCACAGCTGCACCAGAAAAGCATAATGAAGAAGAAAGCTGGTCAAAAAACCAACTCCACAGTCAAAGACAAAGAACAGATAGTAGTAGCAGTCACTGAGCAGTTAGGCAGTTGCAAATTAGGTATTCAGGAGAAAGCTGCTGATTGTGAACTTCCTTTTCAGAAAGTCAGTACTCAAATTTCTTCAAATACTCCTTCACATGAAAGATTAAAAGCTTCAGGAAATTTTGAAAACAAATACAATATGTCAGATATAACTCTTGTAGGCATAAGTAAGAAAAGTGCTGAGCATCTTAAAAAGAAATTTGCCAAATCAAACCAAGTTTCTAGTTCAGTGCAGGTCTGTCCTGAAGTTGCAAAGACGAACTTACTTAAAGTTCTGAGGGAGACTTTGATTGAGTGGAAGACAGAAGAAACTCTGAGAGTTTTGTATGGCCAAAATTACGCTTCTGTATGTCTGAAACCTTCTTCAGCCTGTCTAGTTAATGAAGAACTTAATGAAGATGACATAAACTCTGACTCAGATGATCATTCCCTTGGCTTAAGGGGATCTCAGAATAGCCTGGATGAGTTTTTATCTTTTAGAGGCTCAGATACAGCCACTAAGCCACTACCAAGTTATGAGAACTTAAAAAAAGAAACTGAAACATTAAATCTGAGGATCAGAGAATTTTGTAGAGGACAGTATGTTTTGAATGAAGAAACTACCATATCACAAGACTCAGAAGAGCATGATCCCACCTTTCCACTGATAGATTCAAGTTCCCAGGACCAGATTAGAAAACACATCGTACTCGAAAAATTGAGTAAAGTATTGCCTGGACTTTTGGGTCCTCTTCAGATTACTTTAGGAGATATTTACACTCAACTTAAAAATCTTGTCCGAACTTTCAGATTAACAAATAGAAATATTATACACAGTCCTGTGGAGTGGACATTAATTGCTGTGGTGTTGCTGTCATTACTGACCCCAGTTCTTGGCATTCAGAAGCATTCTCCGAAAAATGTGTTATTTACACAGTTTATAGCCACCTTGCTTGAAGAATTACACTTAAAGAATGAAGACCTTAAAAGTTTAACCATCGTATTTAGAATTAGCTGTTAA

Related Sequences

XP_004841621.1 Protein

Rpap2 PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 [Heterocephalus glaber]

Length: 605 aa     
>XP_004841621.1
MADFAGQLPVGLTTRPAPASRKATGTKQTSGLRQDASKRKAELEASVKKKIECERKALHFVEQLLEENITEDFLMECGKFITPAHYSDVVVERSIIKFCGYPLCQKKLGIVPKQKYKISTKTNKVYDITERKSFCSSFCYKASKFFEAQIPKTPVWVREEDRQPDFQLLTEGQSCHSGEEVQLHSKVIKTSDIDNPAHFEKQYESSSSSTCGDSSSDNEQDFVSSILPGKRPNATGMGPQLHQKSIMKKKAGQKTNSTVKDKEQIVVAVTEQLGSCKLGIQEKAADCELPFQKVSTQISSNTPSHERLKASGNFENKYNMSDITLVGISKKSAEHLKKKFAKSNQVSSSVQVCPEVAKTNLLKVLRETLIEWKTEETLRVLYGQNYASVCLKPSSACLVNEELNEDDINSDSDDHSLGLRGSQNSLDEFLSFRGSDTATKPLPSYENLKKETETLNLRIREFCRGQYVLNEETTISQDSEEHDPTFPLIDSSSQDQIRKHIVLEKLSKVLPGLLGPLQITLGDIYTQLKNLVRTFRLTNRNIIHSPVEWTLIAVVLLSLLTPVLGIQKHSPKNVLFTQFIATLLEELHLKNEDLKSLTIVFRISC