Details from NCBI annotation

Gene Symbol Abca4
Gene Name ATP-binding cassette, sub-family A (ABC1), member 4
Entrez Gene ID 101725111

Database interlinks

Part of NW_004624742.1 (Scaffold)

For more information consult the page for NW_004624742.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ABCA4 ENSCPOG00000015461 (Guinea pig)

Gene Details

ATP-binding cassette, sub-family A (ABC1), member 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013942, Guinea pig)

Protein Percentage 91.94%
CDS Percentage 92.48%
Ka/Ks Ratio 0.23015 (Ka = 0.0436, Ks = 0.1892)

ABCA4 ENSG00000198691 (Human)

Gene Details

ATP-binding cassette, sub-family A (ABC1), member 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000359245, Human)

Protein Percentage 89.0%
CDS Percentage 88.72%
Ka/Ks Ratio 0.17053 (Ka = 0.059, Ks = 0.3458)

Abca4 ENSMUSG00000028125 (Mouse)

Gene Details

ATP-binding cassette, sub-family A (ABC1), member 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000013995, Mouse)

Protein Percentage 87.92%
CDS Percentage 86.18%
Ka/Ks Ratio 0.1484 (Ka = 0.0696, Ks = 0.4688)

Abca4 ENSRNOG00000012892 (Rat)

Gene Details

ATP-binding cassette, subfamily A (ABC1), member 4 (Abca4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017878, Rat)

Protein Percentage 87.42%
CDS Percentage 85.79%
Ka/Ks Ratio 0.14371 (Ka = 0.0707, Ks = 0.4922)

Genome Location

Sequence Coding sequence

Length: 7002 bp    Location: 3536591..3661706   Strand: +
>XM_004841560.1
ATGGGCTTTGCCAGACAGATACAGCTTTTGCTCTGGAAGAACTGGACTCTTCGGAAAAGGCAAAAGATTCGCTTTGTGGTGGAACTCGTATGGCCTTTATCTTTGTTTCTGGTCTTGATCTGGCTAAGGAATGCCAACCCACTCTACAGCCAGCATGAATGCCATTTTCCTAACAAGGCCATGCCCTCTGCAGGAGTGTTGCCATGGCTCCAGGGGATTTTCTGCAACATGAACAATCCTTGTTTTCAAAGCCCTACCCCAGGAGAATCTCCTGGAATTGTGTCAAACTATAACAACTCCATCTTGGCAAGAGTGTTTCAAGATTTTCAAGAACTCCTCATAGATGCACCAGAGAACCAGCACCTTGGCCAGATTTGGAGAGACCTTCAAACCTTGTCCCGGCTCATGGACACTCTGCGGACTCACCCTGAGAGAATTGCAGGAAGAGGAATACAAATTCGGAATGTTCTAAAAGATGAAGAGACATTGACACTATTTCTCAGGAAAAACATTGGCCTGTCCAACTCAGTGGCCCACCTTCTGGTCAATTCCCAAGTCCGTGTGCAGCAGTTTGCTCATGGTGTCCCAGATCTGGTGCTGAAGGACATTGCCTGCAGCGAGGTTCTTTTGGAACGTTTCATCATTTTCAGCCAGCGACGTGGGGCACATACTGTGCGAGATGCCTTGTGTTCCCTCTCCCAGGGCACCCTACAGTGGATGGAAGACACTCTGTATGCCAATGTGGACTTCTTCAAGCTCTTCCAAGTGCTTCCCACACTCCTAGACAGTGGTTCTCAAGGTATCAACCTGAGATTCTGGGGAAGAATATTATCTGATATGACACCAAGAATTCAAGAGTTCATTCATCAGCCAAGTGTTCAAGACCTGCTGTGGGTGACCAGATCCCTCCTGCAGAACAGGGGTCCGGAGACCTTCACAGAACTGAAGGGCATCCTGTCTGATCTCCTGTGTGGCTACCCAGAGGGAGGAGGCTCTCGGGTGTTCTCCTTCAACTGGTATGAAGACAATAACTATAAGGCCTTCCTGGGGATGGACTCCACAAGGAAAGATCCCAGTTATTCATATGACAAAAGAACAACACCCTTTTGTAATGCATTGATCCAGAGTTTGGAGTCAAACCCTTTAACCAAAATAGCCTGGAGGGCAGCAAAGCCTTTGCTGATGGGAAAAATCCTCTTTACTCCTGATTCCCCTGCAGCTCGAAGGATACTGAAAAATGCCAACTCAACTTTTGAGGAACTGGAGCGTCTTAGGAAGCTGATCAAAGCCTGGGAAGAAGTAGGGCCCCAGATCTGGTACTTCTTTGACAACAGCACACAGATGACCATGATCAGAGACACCCTGGAACACCCAACAGTAAAAGACTTTTTGAATAGACAACTTGGTGAAGATGGTATTATTGTGGAGGCCATGAAAAGCTTCCTCTACAAGGGTCCTCAAGAAAATCAGGCTGATGATATAACCAACTTTGACTGGAGGGACATATTTAATATCACTGACCTCTCCCTACGCATGGCTGGTCAATACCTGGAGTGCCTGGTCTTGGATAAGTTTGAAAGCTATGATGATGAAATTCAGCTCACCCAACAAGCCTTGTCTCTGCTGGAAGAAAACAGGTTCTGGGCTGGTGTGGTGTTCCCTGACATGTATCCCTGGACCAGCTCCCTACCACCGCACGTGAAGTACAAGATCCGGATGGACATAGACGTGGTGGAAAAAACCAATAAGATCAAGGACAGGTACTGGGATTCTGGTCCCAGGGCAGATCCTGTGGAAGATCTCCGGTACATCTGGGGAGGCTTTGCCTATCTTCAGGACATGGTTGAGCAGGGGATCACAAGGAGTCAGGCCCGGAAGGAAGCTCCGATAGGAGTCTATCTTCAGCAGATGCCTTATCCCTGCTTTGTGGATGACTCTTTTATGATCATCCTGAACCGCTGTTTCCCTATCTTCGTGGTGCTGGCATGGATCTACTCTGTCTCCATGACCGTTAAGGGCATCGTCTTGGAAAAGGAGTTGAGGCTAAAGGAGACCTTGAAAAATCAGGGTGTCTCCAATGCAGTAATTTGGTGTACCTGGTTCCTGGACAGCTTCTCTGTCATGTCAATGAGCATCTTTCTCCTGACACTATTCATCATGCATGGAAGAATCCTACATTATAGTGATCCTTTCATCATCTTCCTGTTCCTGTTGGCTTTCTCCACTGCCACAATCATGCAGTGCTTCCTGCTCAGCACCTTCTTCTCCAAAGCCAGCCTGGCAGCAGCCTGCAGTGGTGTCATCTACTTCACCCTCTACCTGCCACATATTCTGTGCTTCGCCTGGCAGGACCAGATGACAGCTGAGCTAAAGAAAGCTGTGAGCCTTCTGTCTCCTGTGGCATTTGGGTTTGGCACTGAGTACCTGGTCCGCTTTGAAGAGCAAGGCCTGGGGCTACAGTGGAGCAACATTGGGAACAGCCCCATGGAAGGGGATGAGTTCAGTTTCCTGTTGTCCATGCAGATGATGCTCCTTGATGCAGCTCTGTATGGTTTGCTTGCCTGGTACCTTGACCAGGTGTTCCCAGGGAACTATGGAACCCCACTTCCTTGGTACTTCCTTCTACAAGAATCTTATTGGCTTAGTGGTGAAGGGTGTTCAACTAGAGAAGAAAGAACATTAGAAAAGACAGAACCCATAACGGAGGAAATGGAGGATCCTGAACACCCAGAAGGAATGAATGACTCTTTCTTTGAACATGAGCTTCCGGGATCGGTTCCTGGAGTATGCGTGAAGAATCTGGTAAAGATTTTTGAGCCCTCTGGCCGGCCAGCTGTGGACTATCTTAACATTACCTTCTATGAGAACCAGATCACTGCATTCCTTGGTCACAATGGAGCAGGAAAAACCACCACCTTGTCCATCCTGACAGGTCTGATGCCACCGACATCAGGAACGGTGCTCATTGGGGGAAAGGACATTGAAACTAACCTAGATGCAATCCGGCAGAGCCTTGGCATGTGTCCACAGCATAACATCCTGTTCCACCACCTCACAGTGGCCGAACACATCCTGTTCTATGCCCAGCTGAAAGGGAAGTCCTGGGAGGAGGCCCAGCTGGAGATGGAGACCATGCTAGAGGACACAGGCCTGCACCACAAGAGGAACAAAGAAGCTCAGAATCTTTCAGGTGGCATGCAGAGAAAGCTGTCCGTTGCCATTGCATTCGTGGGAGATGCCAAGGTGGTTGTTCTGGACGAGCCCACCTCTGGGGTGGACCCCTACTCCAGACGCTCGATCTGGGACCTGCTCCTGAAGTACCGCGCAGGCAGAACTATCATCATGTCCACCCACCACATGGACGAGGCAGACCTCCTTGGGGACCGAATTGCCATCATTTCCCAGGGAAGGCTTTACTGCTCGGGCACCCCATTCTTCCTGAAGAACTGCTTTGGCACAGGCTTCTACTTGACCTTGGTTCGCAAGATGAAAACCATCCAAAGCCAAGGTGGCAGATGTGAGGGGACCTGCAGCTGTGCGTCTAAGGGTTTCTCTGTCAGGTGTCCAGCCCGTGTGGATGAGATAACTCCAGAACAAGTCTTGGACGGGGATGTGAATGAGCTGATGGATGTGGTTTGCCACCATATTCCAGAGGCGAAGCTGGTGGAATGCATCGGTCAAGAACTTATCTTCCTTCTTCCAAATAAGAATTTCAAGCAGAGGGCATATGCTAGCCTCTTCAGAGAGCTGGAAGAGACTCTGCCGGACCTGGGGCTGAGCAGTTTTGGAATTTCTGACACTCCTCTGGAAGAGATTTTTCTGAAGGCCACAGAGGAATCTGATTCAGGACTTCTGTTTGCTGGCAGCACTCAGCAGAAAAGGGAACATGTCAACCTCCGACACCCCTGTTTGGGGCCTAGCAAGAAAGACAGGCAGCCTACCCAAGGCTCCAACATCTGCTCTCTGGAGCAGGCTGCCCACCCTGAGGGCCAGGCTCCCCCAGAGCCAGAGGAACCCAACATCCCACTCAACACAGGCATGCGGCTCATCCTCCAGCAGGTGCAAGCGCTGCTGGTCAAGCGATTCCACCACACAGTTCGAAGCCACAAGGACTTCCTGGCTCAGATTGTGCTCCCGGCCACTTTTGTGTTTTTAGCTCAGATGCTTTCCATCATTGTGCCTCCTTTTGGTGAATTTCCTGCTTTGACTCTTCACCCCTGGATATATGGGCACCAGTATACCTTCTTCAGCATGGATGAGCCTGGCAGTGAGCGCCTTGCAGTGCTGGCAGATGTCCTCCTGAACAAGCCAGGCTTTGGCAACCGCTGCCTGAAGGAAGAGTGGCTTCCGGAGTACCCCTGTGGCAACTCAACGCCCTGGAAGACTCCCTCTGTGTCCCCGAACGTCACCCACCTATTCCAGAAGCAGAAGTGGACGCCATCCAACCCCTCACCGTCCTGCACGTGCAGCACCAGAGAGAAGCTCACCATGTTGCCTGAGTGCCCCGAGGGCGCCGGGGGGCTCGCACCCCCACAGAGAACACAGGGCAGCACTGAAATCCTACAAGACCTATCCCGCAGGAACATTTCTGACTACTTGGTAAAAACATATCCTGCTCTTATAAGAAACAGTTTAAAGAGCAAATTCTGGGTCAATGAACAAAGGTATGGAGGAATTTCCATCGGAGGAAAGCTCCTGGTTCTCCCCATCACTGGGAAAGCACTTGTTGGTTTTTTAAGTGACCTTGGCCAGATAATGAATGTGAGCGGGGGTCCTATCACCAGAGAAGCCTCTAGAGAAATGTCTGATTTCCTCAAACATCTTGAAACTGAAGACAATGTTAAGGTGTGGTTTAACAACAAAGGCTGGCATGCCCTGGTCAGCTTCCTGAACGTGGCCCACAATGCCATTCTTCGGGCTAGCCTGCCTCAGGACAGGCATCCAGAGGAGCACGGAATCACCATCATCAGCCAGCCCCTGAACCTGACCAAGGAGCAGCTCTCAGAGATTACAGTGCTGACCACTTCAGTGGATGCTGTGGTTGCCATCTGTGTGATTTTCGCCATGTCCTTCGTCCCAGCCAGCTTTGTTCTTTACTTGACCCAAGAGAGGGTGACTAAAGCTAAGCACCTCCAGTTTATCAGTGGAGTGAGTTCCACCACCTACTGGCTGACCAACTTCTTCTGGGACATTATGAATTACGCTGTGAGCGCAGGACTGGTGGTTGGCATCTTCATTGGGTTTCAGAAGAAAGCCTACACTTCCACAGAAAATCTTCCTGCCCTCGTTGCACTGCTCATGCTGTATGGATGGGCAGTCATTCCCATGATGTACCCAGCATCCTTCCTGTTTGATGTCCCCAGCACAGCTTATGTGGCTTTGTCTTGTGCTAATCTGTTCATCGGAATCAACAGCAGCGCCATCACCTTCATCTTGGAATTATTTGAGAATAACCAGACTCTGGCCAGGTTCAACGCCATGCTGAGGAAGTTGCTCATTATCTTCCCTCACTTCTGCCTGGGCCGGGGCCTCATTGACCTGGCAGTGAGCCAAGCTGTGACAGATGTCTATGCCTGGTTTGGTAAAGAGCACTCTTCAAATCCATTCCAGTGGGACATGATTGGGAAGAACCTGGTTGCCATGGCAGTAGAAGGGGTGGTGTATTTCCTTCTGACCCTCTTGGTCCAGCACCATTTCTTCCTCACCAGATGGGTTGCTGAGCCTGCTAAGGAGCCCATTGTTGATGAAGATGATGATGTGGCTGAAGAAAGACAAAGAATTACCAGTGGAGGAAATAAAACTGATATCCTAAGGCTAAATGAACTAACCAAGGTTTATTCAGGCTCCTCCAGCCCAGCAGCGGACAGGCTGTGTGTTGGGGTCCGCCCTGGAGAGTGCTTTGGCCTACTTGGAGTGAATGGAGCTGGCAAAACAACCACATTCAAGATGCTCACTGGGGAGACCACAGTGACCTCAGGTGATGCCACTGTAGCAGGCAAGAGCATTTTAACCAATATTTTTGATGTTCATCAAAGAATGGGCTACTGTCCTCAGTTTGATGCAATTGATGACCTGCTCACAGGCCGAGAACATCTTTACCTTTACGCTCGGCTTCGAGGTATACCAGCAGAAGAAATTGAAAAGGTTGCAAACTGGGGTATTCAGAGCCTGGGACTGTCTCTCTACGCTGACCGCCTGGCCGGCACCTACAGTGGGGGCAATAAGAGGAAACTCTCCACAGCCATCGCGCTCATTGGCTGCCCACCGCTGGTGCTGCTGGATGAGCCCACCACAGGGATGGACCCTCAGGCACGCCGCATGCTGTGGAACACCATTGTGAGCCTCATCAGAGAAGGGAGAGCCGTGGTCCTCACTTCCCACAGCATGGAAGAATGTGAGGCACTGTGCACCCGGCTGGCCATCATGGTGAAGGGCACTTTTCAGTGCCTGGGCACCATTCAGCACCTCAAGTACAAGTTTGGAGATGGCTACATTGTCACAATGAAAATCAAGTCCCCAAAGGACGACCTCCTCCCTGACCTGAACCTGGTGGAGCAGTTCTTCCAAGGGAACTTTCCGGGCAGCGTGCAGCGGGAGAGGCACTACAACATGCTCCAGTTCCAGGTCTCCTCCTCCTCCCTGGCCAGGATCTTCCAGCTGCTCATCTCCCACAAGGACAGCCTGCTCATCGAGGAGTACTCGGTCACACAGACCACGCTGGACCAGGTATTTGTGAACTTTGCTAAACAGCAGACTGAAACTCATGACCTCCCTTTGCACCCTCGAGCTGCTGGAGCCAGACAACAAGCCAAGAATACAATTAGGTCTGACCTCCTTCCACACTACTTGTTCCCTACATCTGGAAAGGAACTGTGGGCAGCTGGAGTACAGGAGCCTCTGTCCATAGGGTCATCTGAACCACTGGCCAGCATAAGTGACCCTGCTGCTGCAGGAAACAAACACATGAGGTCATGCAGTGAGCTCAAGAGGAGGCTCTCGTAG

Related Sequences

XP_004841617.1 Protein

Abca4 PREDICTED: retinal-specific ATP-binding cassette transporter [Heterocephalus glaber]

Length: 2333 aa      View alignments
>XP_004841617.1
MGFARQIQLLLWKNWTLRKRQKIRFVVELVWPLSLFLVLIWLRNANPLYSQHECHFPNKAMPSAGVLPWLQGIFCNMNNPCFQSPTPGESPGIVSNYNNSILARVFQDFQELLIDAPENQHLGQIWRDLQTLSRLMDTLRTHPERIAGRGIQIRNVLKDEETLTLFLRKNIGLSNSVAHLLVNSQVRVQQFAHGVPDLVLKDIACSEVLLERFIIFSQRRGAHTVRDALCSLSQGTLQWMEDTLYANVDFFKLFQVLPTLLDSGSQGINLRFWGRILSDMTPRIQEFIHQPSVQDLLWVTRSLLQNRGPETFTELKGILSDLLCGYPEGGGSRVFSFNWYEDNNYKAFLGMDSTRKDPSYSYDKRTTPFCNALIQSLESNPLTKIAWRAAKPLLMGKILFTPDSPAARRILKNANSTFEELERLRKLIKAWEEVGPQIWYFFDNSTQMTMIRDTLEHPTVKDFLNRQLGEDGIIVEAMKSFLYKGPQENQADDITNFDWRDIFNITDLSLRMAGQYLECLVLDKFESYDDEIQLTQQALSLLEENRFWAGVVFPDMYPWTSSLPPHVKYKIRMDIDVVEKTNKIKDRYWDSGPRADPVEDLRYIWGGFAYLQDMVEQGITRSQARKEAPIGVYLQQMPYPCFVDDSFMIILNRCFPIFVVLAWIYSVSMTVKGIVLEKELRLKETLKNQGVSNAVIWCTWFLDSFSVMSMSIFLLTLFIMHGRILHYSDPFIIFLFLLAFSTATIMQCFLLSTFFSKASLAAACSGVIYFTLYLPHILCFAWQDQMTAELKKAVSLLSPVAFGFGTEYLVRFEEQGLGLQWSNIGNSPMEGDEFSFLLSMQMMLLDAALYGLLAWYLDQVFPGNYGTPLPWYFLLQESYWLSGEGCSTREERTLEKTEPITEEMEDPEHPEGMNDSFFEHELPGSVPGVCVKNLVKIFEPSGRPAVDYLNITFYENQITAFLGHNGAGKTTTLSILTGLMPPTSGTVLIGGKDIETNLDAIRQSLGMCPQHNILFHHLTVAEHILFYAQLKGKSWEEAQLEMETMLEDTGLHHKRNKEAQNLSGGMQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRAGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPFFLKNCFGTGFYLTLVRKMKTIQSQGGRCEGTCSCASKGFSVRCPARVDEITPEQVLDGDVNELMDVVCHHIPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLPDLGLSSFGISDTPLEEIFLKATEESDSGLLFAGSTQQKREHVNLRHPCLGPSKKDRQPTQGSNICSLEQAAHPEGQAPPEPEEPNIPLNTGMRLILQQVQALLVKRFHHTVRSHKDFLAQIVLPATFVFLAQMLSIIVPPFGEFPALTLHPWIYGHQYTFFSMDEPGSERLAVLADVLLNKPGFGNRCLKEEWLPEYPCGNSTPWKTPSVSPNVTHLFQKQKWTPSNPSPSCTCSTREKLTMLPECPEGAGGLAPPQRTQGSTEILQDLSRRNISDYLVKTYPALIRNSLKSKFWVNEQRYGGISIGGKLLVLPITGKALVGFLSDLGQIMNVSGGPITREASREMSDFLKHLETEDNVKVWFNNKGWHALVSFLNVAHNAILRASLPQDRHPEEHGITIISQPLNLTKEQLSEITVLTTSVDAVVAICVIFAMSFVPASFVLYLTQERVTKAKHLQFISGVSSTTYWLTNFFWDIMNYAVSAGLVVGIFIGFQKKAYTSTENLPALVALLMLYGWAVIPMMYPASFLFDVPSTAYVALSCANLFIGINSSAITFILELFENNQTLARFNAMLRKLLIIFPHFCLGRGLIDLAVSQAVTDVYAWFGKEHSSNPFQWDMIGKNLVAMAVEGVVYFLLTLLVQHHFFLTRWVAEPAKEPIVDEDDDVAEERQRITSGGNKTDILRLNELTKVYSGSSSPAADRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGETTVTSGDATVAGKSILTNIFDVHQRMGYCPQFDAIDDLLTGREHLYLYARLRGIPAEEIEKVANWGIQSLGLSLYADRLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSLIREGRAVVLTSHSMEECEALCTRLAIMVKGTFQCLGTIQHLKYKFGDGYIVTMKIKSPKDDLLPDLNLVEQFFQGNFPGSVQRERHYNMLQFQVSSSSLARIFQLLISHKDSLLIEEYSVTQTTLDQVFVNFAKQQTETHDLPLHPRAAGARQQAKNTIRSDLLPHYLFPTSGKELWAAGVQEPLSIGSSEPLASISDPAAAGNKHMRSCSELKRRLS