Details from NCBI annotation

Gene Symbol Nfia
Gene Name nuclear factor I/A, transcript variant X2
Entrez Gene ID 101721781

Database interlinks

Part of NW_004624742.1 (Scaffold)

For more information consult the page for NW_004624742.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NFIA ENSCPOG00000010091 (Guinea pig)

Gene Details

nuclear factor I/A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009061, Guinea pig)

Protein Percentage 89.25%
CDS Percentage 86.5%
Ka/Ks Ratio 0.1312 (Ka = 0.0699, Ks = 0.5331)

NFIA ENSG00000162599 (Human)

Gene Details

nuclear factor I/A

External Links

Gene Match (Ensembl Protein ID: ENSP00000360231, Human)

Protein Percentage 88.7%
CDS Percentage 80.48%
Ka/Ks Ratio 0.08619 (Ka = 0.0792, Ks = 0.9194)

Nfia ENSMUSG00000028565 (Mouse)

Gene Details

nuclear factor I/A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000074899, Mouse)

Protein Percentage 92.37%
CDS Percentage 83.33%
Ka/Ks Ratio 0.05782 (Ka = 0.049, Ks = 0.8472)

Nfia ENSRNOG00000006966 (Rat)

Gene Details

nuclear factor I/A (Nfia), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004017, Rat)

Protein Percentage 92.62%
CDS Percentage 83.42%
Ka/Ks Ratio 0.05776 (Ka = 0.0478, Ks = 0.8277)

Genome Location

Sequence Coding sequence

Length: 1596 bp    Location: 32197181..31893957   Strand: -
>XM_004841556.1
ATGCTGCTGGAGAAAGTTAACTTTGCTTTAGTTGTTTCACACTCGGGGAAGCTGGTAACTGTCGTGGAGAGCGGCGCTCAGTTTCTCCAGCAAATGCGTGGCTTCTTCTCCCACCGAGGGACTGCGGATGAGTTCCACCCTTTCATCGAAGCACTGCTGCCCCACGTCCGAGCCTTCGCCTACACGTGGTTCAACCTGCAGGCCCGGAAACGAAAATACTTCAAGAAGCACGAGAAGCGCATGTCCAAGGAAGAGGAGCGGGCTGTGAAGGATGAGCTGCTGAGCGAGAAGCCGGAGGTCAAGCAGAAGTGGGCGTCCCGGCTCCTGGCCAAGCTGCGGAAAGACATCCGACCCGAGTACCGAGAGGACTTTGTGCTCACGGTCACGGGCAAGAAGCCTCCCTGCTGCGTGCTTTCCAACCCGGACCAGAAAGGCAAGATGCGGAGAATTGACTGCCTGCGCCAGGCAGACAAAGTCTGGAGGTTGGACCTGGTGATGGTGATCCTGTTTAAGGGCATCCCGCTGGAAAGTACTGATGGCGAGCGTCTGGTGAAGGCCCCGCAGTGCTCCAACCCCGGGCTCTGCGTCCAGCCCCACCACATAGGGGTGTCCGTCAAGGAGCTCGACTTGTACTTGGCCTACTTTGTGCACGCGGCAGATCCAAGTCAATCTGAAAGTCCCAGCCAGCCAAGTGACGCTGACATTAAGGACCAGGCAGAAAACGGACATCTGGGCTTCCAGGACAGCTTCGTCACGTCAGGGGTGTTCAGTGTCACTGAGCTGGTCCGTGTGTCGCAGACGCCTATAGCTGCAGGAACCGGCCCCAATTTTTCTCTCTCAGACTTGGAAAGCTCTTCCTACTACAGCATGAGCCCGGGAGCCATGAGGAGGTCGCTCCCCAGCACATCCTCCACGAGCTCCACGAAGCGCCTCAAGTCTGTGGAGGACGAGATGGACAGCCCCAGCGAGGAGCCGTTCTACACAGGCCAGGGCCGCTCCCCGGGCAGTGGCAGCCAGTCCAGCGGGTGGCATGAGGTGGAGCCAGGGATGCCGTCTCCAACCACGCTGAAGAAGTCGGAGAAGTCGGGCTTCAGCAGCCCCTCGCCCTCGCAGACCTCCTCACTGGGCACAGCGTTCACGCAGCACCACCGGCCGGTCATCACGGGACCCCGAGCGAGCCCTCACGCCACGCCATCGACGCTGCACTTCCCGACATCCCCCATCATCCAGCAGCCCGGGCCATACTTCTCCCACCCGGCCATCCGGTACCACCCTCAGGAGACGCTGAAGGAGTTCGTCCAGCTTGTCTGCCCTGACGCTGGTCAGCAGGCCGGACAGGTGGGGTTCCTCAATCCCAATGGAAGCAGCCAAGGCAAGGTGCACAACCCATTCCTCCCCACCCCGATGCTGCCACCGCCACCGCCACCACCAATGGCCAGGCCGGTGCCTCTGCCAGTGCCGGACACGAAGCCTCCGGCCACATCCACGGAAGGGGGCCCAGCCTCCCCCACCTCCCCAATCCTGGTACCTGGGATAAAAGTCACCGCGTCCCACCACCCACCAGACAGACCACCCGACCCCTTCTCAACTCTGTAA

Related Sequences

XP_004841613.1 Protein

Nfia PREDICTED: nuclear factor 1 A-type isoform X2 [Heterocephalus glaber]

Length: 531 aa      View alignments
>XP_004841613.1
MLLEKVNFALVVSHSGKLVTVVESGAQFLQQMRGFFSHRGTADEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKAPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADPSQSESPSQPSDADIKDQAENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPSEEPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPATSTEGGPASPTSPILVPGIKVTASHHPPDRPPDPFSTL