Sequence details NCBI ID: XM_004841517.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Dnajc6
Gene Name DnaJ (Hsp40) homolog, subfamily C, member 6, transcript variant X4
Entrez Gene ID 101707904

Database interlinks

Part of NW_004624742.1 (Scaffold)

For more information consult the page for NW_004624742.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

DNAJC6 ENSCPOG00000008733 (Guinea pig)

Gene Details

DnaJ (Hsp40) homolog, subfamily C, member 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007840, Guinea pig)

Protein Percentage 91.94%
CDS Percentage 87.63%
Ka/Ks Ratio 0.06878 (Ka = 0.0401, Ks = 0.5836)

DNAJC6 ENSG00000116675 (Human)

Gene Details

DnaJ (Hsp40) homolog, subfamily C, member 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000360108, Human)

Protein Percentage 92.43%
CDS Percentage 85.41%
Ka/Ks Ratio 0.06321 (Ka = 0.0416, Ks = 0.6578)

Dnajc6 ENSMUSG00000028528 (Mouse)

Gene Details

DnaJ (Hsp40) homolog, subfamily C, member 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000102546, Mouse)

Protein Percentage 91.65%
CDS Percentage 84.0%
Ka/Ks Ratio 0.05506 (Ka = 0.0453, Ks = 0.8223)

Dnajc6 ENSRNOG00000011968 (Rat)

Gene Details

DnaJ (Hsp40) homolog, subfamily C, member 6 (Dnajc6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059262, Rat)

Protein Percentage 91.73%
CDS Percentage 84.16%
Ka/Ks Ratio 0.05496 (Ka = 0.0443, Ks = 0.8067)

Genome Location

Sequence Coding sequence

Length: 2703 bp    Location: 29525987..29398545   Strand: -
Raw sequence   
>XM_004841517.1
ATGGAGCCCAGTTATGGGGGAGGCCTTTTTGACATGGTGAAGGGAGGCGCGGGGAGGCTCTTCAGTAACCTAAAGGACAACTTGAAAGACACCCTGAAGGACACCTCTTCCCGAGTGATACAGTCTGTATCCAGCTACACGAAGGGAGATTTAGACTTCACTTACGTTACCTCCAGAATTATTGTCATGTCCTTTCCCGTGGACAGTGTCGACATAGGATTCAGGAATCAGGTGGACGACATCCGAAGTTTTTTGGATTCCAGACATCTCGACCACTACACAGTCTACAACCTGTCACCCAAGTCTTACCGGACGGCCAAGTTTCACAGCCGGGTCTCAGAGTGCAGCTGGCCCCTCAGGCAGGCCCCCAGCCTGCACAACCTTTTCGCTGTGTGTCGGAATATGTACAACTGGCTGCTGCAGAACCCCAAAAACGTCTGTGTGGTCCACTGCTTGGACGGCCGGGCCGCCTCGTCCATCCTGGTCGGTGCTATGTTCATCTTCTGCAATCTCTACTGCACCCCTGGGCCTGCCATTCGGTTGCTGTACGCAAAGAGGCCGGGAATCGGACTGTCGCCGTCCCACCGGAGGTACCTGGGCTACATGTGTGACCTCCTGGCAGACAAGCCCTACCACCCTCACTTCAAGCCTCTCACCATGAAGTCCATCACCGTCAGTCCTGTCCCCTTCTTTAACAAGCAGAGGACTGGATGTCGCCCTTACTGCGACGTGCTGATCGGAGAAACCAAAATATACTCGACCTGCACAGAGTTTGAGCGAATGAAAGAATATCGTGTCCAAGATGGAAAAATCTTCATTCCCTTGAACATCACTGTGCAGGGAGACGTGGTTGTGTCCGTGTTCCACCTGAGGTCCACCATTGGGAGCCGGCTGCAGGCTAAGGTGACCAACACGCAGATCTTGCAGCTTCAGTTTCACTCTGGATTCATCCCCCTGGACACCACAGTTTTAAAGTTCACCAAGCCTGAGTTAGATGCGTGTGATGTCCCAGAGAAGTATCCCCAGCTGTTTCAAGTCACACTGGATGTGGAGCTCCAGCCGCAGGACAAGGCGGTGGACCTGACCCCGCCGTGGGAGCACTGCTGCACAAAGGACGTCAGTCCCAGCGTGCTCTTCTCCTCTCACCAGGAGCACCAGGACACGCTGGCCTTGGGAGGACAGGCTGCGGTGGACGCGCCCCCCGACACCCCCAGGCACCCCGGCCAAGGCGGCTTCTTCTCATCTCTCTGTTGGCAAGATCAGAAGCCGGAGAAGTCCTGCGAGGAGGACCACGCAGCCCTGGTGAACCAGGAGAGCGAGCAGTCGGACGATGAGCTCCTGACGCTGTCCAGTCCGCACGGCAGCGCCAACGGTGACCGGCAGCACGGGCCCAAGAGGCCCAGCAAGAAGCAGCAGGAGCCCGTGGTGCCCCCGGCCCCAGAGGAGGTGGACCTGCTGGGCCTCGAGGGCTCCGACGTGAGCCAGAGCTTCTCCCCGCAGGCGCCCCCGCCCACCAACACCGAACTGCTCAGTGACCTGGACCTGTTCGGGGGCACAGGTGCCGCTGGCCCAGCCCCGGCCGGACAGTCGGGGGTGGAGGATGCGTTCCACCCCAGCGGGGCAGCGTCCGCCCAGTCTACACCGCGCCGCAGCGCCTCCAGCTCCGCCTCGCCCACCCTGCGCGTGGGAGAAGGTGCCACCTTTGACCCATTTGGAGCCCCTGCTAAGCCATCTGGCCAAGACTTGCTGGGTTCCTTTCTAAGCACATCCAGTGCTTCCAGTGACCCCTTCCTTCAGCCCACGAGAAGTCCTTCACCTACTGTTCTTGCGTCTAGCACCCCTGCTGTGAGCATTCAGCCAGATGTTTTGGGAGGCTGGGACTGGCACGCTAAACCAGGAGGTTTTGGAATGGGAAGCAAATCAGCAGCCACCAGCCCGACAGGCTCCTCACATGGCACCCCGACCCATCAGAGCAAGCCCCAGACGCTGGACCCTTTTGCCGACCTCGGGACACTAGGCAGCTCTTCATTTGCTAGCAAACCTACCACACCAACTGGCCTGGGTGGAGGATTCCCACCTCTCAGCTCACCACAGAAAGCATCTCCCCAGCCCATGGGCAGCGGGTGGCAGCAAGGGGGTGGCTACAGCTGGCAGCAGTCACAGTCTAAGCTGCAGCCCAGCATGCCACACTCCTCGCCCCAGAACCGGCCCAACTACAACGTGAGCTTCTCCTCCGTGCCCGGGAGCCAGAGCGAACGTGGGAAAGGACCCACTAATTTGGAAGGGAAACAAAAAGCAGCTGACTTTGAAGACCTCCTTTCTAGTCAGGGCTTCAATGCTCACAAAGACAAGAAGGGACCTCGAACAATAGCAGAGATGAGAAAGGAGGAGATGGCCAAGGAAATGGATCCGGAAAAGTTGAAGATCCTGGAATGGATAGAAGGTAAGGAGAGGAATATCAGAGCCCTTCTCTCCACGATGCACACAGTGCTGTGGGCCGGGGAGACAAAGTGGAAACCCGTGGGCATGGCGGATCTGGTGACACCAGAGCAGGTGAAGAAGGTGTATCGGAAGGCCGTGCTGGTGGTGCACCCGGACAAGGCGACCGGGCAACCCTATGAACAATATGCAAAGATGATTTTTATGGAGCTCAATGATGCCTGGTCTGAATTTGAAAACCAAGGACAAAAGCCCTTGTATTAA

Related Sequences

XP_004841574.1 Protein

Dnajc6 PREDICTED: putative tyrosine-protein phosphatase auxilin isoform X4 [Heterocephalus glaber]

Length: 900 aa      View alignments
>XP_004841574.1
MEPSYGGGLFDMVKGGAGRLFSNLKDNLKDTLKDTSSRVIQSVSSYTKGDLDFTYVTSRIIVMSFPVDSVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRTAKFHSRVSECSWPLRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFCNLYCTPGPAIRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYHPHFKPLTMKSITVSPVPFFNKQRTGCRPYCDVLIGETKIYSTCTEFERMKEYRVQDGKIFIPLNITVQGDVVVSVFHLRSTIGSRLQAKVTNTQILQLQFHSGFIPLDTTVLKFTKPELDACDVPEKYPQLFQVTLDVELQPQDKAVDLTPPWEHCCTKDVSPSVLFSSHQEHQDTLALGGQAAVDAPPDTPRHPGQGGFFSSLCWQDQKPEKSCEEDHAALVNQESEQSDDELLTLSSPHGSANGDRQHGPKRPSKKQQEPVVPPAPEEVDLLGLEGSDVSQSFSPQAPPPTNTELLSDLDLFGGTGAAGPAPAGQSGVEDAFHPSGAASAQSTPRRSASSSASPTLRVGEGATFDPFGAPAKPSGQDLLGSFLSTSSASSDPFLQPTRSPSPTVLASSTPAVSIQPDVLGGWDWHAKPGGFGMGSKSAATSPTGSSHGTPTHQSKPQTLDPFADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGSGWQQGGGYSWQQSQSKLQPSMPHSSPQNRPNYNVSFSSVPGSQSERGKGPTNLEGKQKAADFEDLLSSQGFNAHKDKKGPRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY