Sequence details NCBI ID: XM_004841499.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Sgip1
Gene Name SH3-domain GRB2-like (endophilin) interacting protein 1, transcript variant X2
Entrez Gene ID 101702838

Database interlinks

Part of NW_004624742.1 (Scaffold)

For more information consult the page for NW_004624742.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SGIP1 ENSCPOG00000012044 (Guinea pig)

Gene Details

SH3-domain GRB2-like (endophilin) interacting protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010834, Guinea pig)

Protein Percentage 94.06%
CDS Percentage 89.98%
Ka/Ks Ratio 0.10001 (Ka = 0.0337, Ks = 0.3367)

SGIP1 ENSG00000118473 (Human)

Gene Details

SH3-domain GRB2-like (endophilin) interacting protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000360076, Human)

Protein Percentage 93.84%
CDS Percentage 89.49%
Ka/Ks Ratio 0.08673 (Ka = 0.0323, Ks = 0.3725)

Sgip1 ENSMUSG00000028524 (Mouse)

Gene Details

SH3-domain GRB2-like (endophilin) interacting protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000079553, Mouse)

Protein Percentage 92.68%
CDS Percentage 87.97%
Ka/Ks Ratio 0.09725 (Ka = 0.0413, Ks = 0.4246)

Sgip1 ENSRNOG00000006357 (Rat)

Gene Details

SH3-containing GRB2-like protein 3-interacting protein 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000048424, Rat)

Protein Percentage 92.74%
CDS Percentage 86.98%
Ka/Ks Ratio 0.09225 (Ka = 0.0443, Ks = 0.4797)

Genome Location

Sequence Coding sequence

Length: 2490 bp    Location: 28439677..28245169   Strand: -
Raw sequence   
>XM_004841499.1
ATGATGGAAGGATTGAAAAAACGTACAAGGAAGGCCTTTGGAATACGGAAGAAAGAGAAGGACACTGATTCCACAGGTTCTCCAGATCGAGATGGAATTCAGCCCAGCCCACACGAGCCACCCTACAGTAACAGAGCAGAGTGTGTGCGTGAAGGAGGAAAGAAGGTTTCGAAGAAAAGCAATGGAGCACCAAATGGATTTTATGCAGAAATTGATTGGGAAAGATATAACTCACCTGAACTGGATGAAGAAGGCTACAGCATCAGACCCGAGGAACCCGGCTCTACCAAAGGAAAGCACTTTTACTCCTCCAGTGAATCAGAAGAGGAAGAAGAATCACACAGGAAGTTCAATATCAAGATCAAGCCATTGCAATCAAAAGACATTCTTAAGAATGCTGCCACTGTCGATGAGCTGAAAGCATCAATAGGGAACATCGCGCTGTCCCCATCACCCGTGAGGAAAAGTCCGAGGCGCAGCCCGGGTGCAATTAAAAGGAACTTATCCAGTGAAGAAGTGGCGAGACCCAGGCGTTCCACACCAACTCCAGAACTCATAAGCAAAAAGCCCCCGGATGACACTGCGGCCCTCGCGCCCCTCTTTGGGCCCCCACTAGAATCGGCTTTCGATGAGCAGAAGACAGAAGTTCTTTTAGATCAGCCTGAAATATGGGGTCCGGGCCAACCAATTAATCCAAGCCTGGAGTCACCGAAGCTAACAAGGCCTTTTCCCACTGGAACACCTCCACCACTGCCTCCAAAACATGTCCCAGCCACCCCACCTCGGACAGGCTCCCCCTTAACAGTTGGACCAGGAAGTGACCAGTCAGCCACAGAGGCCAAAGTTGAAAAACTTCCGTCCATCAATGACTTGGACAGCATTTTTGGCCCAGTGCTGTCCCCCAGGTCCGTTGCTGTTAACACTGAAGAAAAGTGGGTGCAGTTTTCTGACACGCTCCTGGAACACGTTACTCCAGAGTTGGCTTCAAGGGAAAAGGTGGCGTCCCCAAGGGCGGCATCAGACGACCCAGCCGACTCCCCACCGCCAGGCTCTCCTGGCCCCCTGGGACCCTCGGGTCCCCCAGGGCCTGCTGGTCGTCCTCGTCATGTACCATCTCCACTCAATTTAGAAGAAGTGCAGAAGAAAGTGGCTGAGCAGAGCTTCATCAAGGATGATTACTTAGAAACAATCTCATCCGCGAAGGACTGGGGGTTGGGACAGAGAGCAACTCCGCCCACCCCCCCACCTCCCACCTACAGGACTGTGGTCTCGTCCCCTGGACCTGGCTCGGGCAGTGGTACCGGGACCGCCAGCGGTGCGTCATCGCCTGCTCGGCCAGCCACTCCCTTGGTCCCTTGCAGCGGCAGCAGCACTCCACCGCCCCCTCCTCCCCGCCCTCCATCAAGACCAAAGCTGCCTCCAGGGAAGCCTGGAGTCGGAGATGTGTCCAGGCCCTTTAGCCCTCCCGTACACTCTTCCAGCCCTCCTCCGATAGCACCCTTAGCCCGCGCAGAAAGCACTTCTTCAATCTCATCCACCAATTCCCTGAGCGCAGCCACCACTCCCACCGTCGAGAATGAACAGCCTTCCCTCGTTTGGTTTGACAGAGGAAAGTTTTATTTGACTTTTGAAGGTTCTTCCCGGGGACCCAGCCCCCTAACCATGGGGGCCCAGGACACCCTCCCCGTGGCAGCGGCTTTCACGGAAACCGTCAACGCCTACTTCAAAGCTGCGGACCCCACCAAGTGTATCGTGAAGATTACCGGAGAGATGGTGTTGTCTTTTCCTGCCGGCATCACCAGACACTTTGCCAACAACCCGTCCCCAGCGGCTCTGACCTTCCGGGTGATAAATTTCAGCAGGTTAGAACACGTCCTGCCAAATCCCCAACTGCTCTGCTGTGATAACACTCAAAATGATGCCAATACCAAGGAATTCTGGGTAAACATGCCAAATTTGATGACTCACCTCAAAAAGGTGTCTGAACAAAAACCCCAAGCTACCTATTATAATGTGGACATGCTCAAATACCAGGTGTCAGCCCAGGGCATTCAGTCCACACCCCTGAACCTGGCGGTGAACTGGCGGTGTGAACCAGCCAGCACCGACCTGCGCATCGACTACAAGTACAACTCGGACGCCATGGCCACCGCAGTGGCCCTCAACAACGTGCAGTTCCTGGTCCCTGTGGATGGCGGTGTGACCAAGCTCCAGGCCGTGCTCCCGCCAGCCGTCTGGAATGCTGAACAACAAAGAATATTGTGGAAGATCCCTGATATCTCTCAGAAGTCAGAAAACGGAGGGGTGGGTTCTCTATTGGCAAGATTTCAGTTATCTGAAGGTCCGAGCAAACCTTCCCCGCTGGTTGTCCAGTTCACAAGTGAAGGAACCACTCTTTCTGGCTGTGACATTGAACTTGTCGGAGCAGGGTATCGATTTTCACTCATCAAGAAGAGGTTTGCTGCAGGAAAGTACTTGGCAGATAACTAA

Related Sequences

XP_004841556.1 Protein

Sgip1 PREDICTED: SH3-containing GRB2-like protein 3-interacting protein 1 isoform X2 [Heterocephalus glaber]

Length: 829 aa      View alignments
>XP_004841556.1
MMEGLKKRTRKAFGIRKKEKDTDSTGSPDRDGIQPSPHEPPYSNRAECVREGGKKVSKKSNGAPNGFYAEIDWERYNSPELDEEGYSIRPEEPGSTKGKHFYSSSESEEEEESHRKFNIKIKPLQSKDILKNAATVDELKASIGNIALSPSPVRKSPRRSPGAIKRNLSSEEVARPRRSTPTPELISKKPPDDTAALAPLFGPPLESAFDEQKTEVLLDQPEIWGPGQPINPSLESPKLTRPFPTGTPPPLPPKHVPATPPRTGSPLTVGPGSDQSATEAKVEKLPSINDLDSIFGPVLSPRSVAVNTEEKWVQFSDTLLEHVTPELASREKVASPRAASDDPADSPPPGSPGPLGPSGPPGPAGRPRHVPSPLNLEEVQKKVAEQSFIKDDYLETISSAKDWGLGQRATPPTPPPPTYRTVVSSPGPGSGSGTGTASGASSPARPATPLVPCSGSSTPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPPVHSSSPPPIAPLARAESTSSISSTNSLSAATTPTVENEQPSLVWFDRGKFYLTFEGSSRGPSPLTMGAQDTLPVAAAFTETVNAYFKAADPTKCIVKITGEMVLSFPAGITRHFANNPSPAALTFRVINFSRLEHVLPNPQLLCCDNTQNDANTKEFWVNMPNLMTHLKKVSEQKPQATYYNVDMLKYQVSAQGIQSTPLNLAVNWRCEPASTDLRIDYKYNSDAMATAVALNNVQFLVPVDGGVTKLQAVLPPAVWNAEQQRILWKIPDISQKSENGGVGSLLARFQLSEGPSKPSPLVVQFTSEGTTLSGCDIELVGAGYRFSLIKKRFAAGKYLADN