Details from NCBI annotation

Gene Symbol Serbp1
Gene Name SERPINE1 mRNA binding protein 1, transcript variant X4
Entrez Gene ID 101696577

Database interlinks

Part of NW_004624742.1 (Scaffold)

For more information consult the page for NW_004624742.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SERBP1 ENSCPOG00000020069 (Guinea pig)

Gene Details

SERPINE1 mRNA binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015980, Guinea pig)

Protein Percentage 93.26%
CDS Percentage 87.39%
Ka/Ks Ratio 0.05333 (Ka = 0.0229, Ks = 0.429)

SERBP1 ENSG00000142864 (Human)

Gene Details

SERPINE1 mRNA binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000360034, Human)

Protein Percentage 97.93%
CDS Percentage 90.85%
Ka/Ks Ratio 0.02257 (Ka = 0.0096, Ks = 0.4246)

Serbp1 ENSMUSG00000036371 (Mouse)

Gene Details

serpine1 mRNA binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000039110, Mouse)

Protein Percentage 97.67%
CDS Percentage 89.38%
Ka/Ks Ratio 0.02059 (Ka = 0.0108, Ks = 0.5255)

SERBP1 ENSRNOG00000005890 (Rat)

Gene Details

Plasminogen activator inhibitor 1 RNA-binding protein Plasminogen activator inhibitor 1 RNA-binding protein, N-terminally processed

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009503, Rat)

Protein Percentage 97.93%
CDS Percentage 89.81%
Ka/Ks Ratio 0.01859 (Ka = 0.0095, Ks = 0.5119)

Genome Location

Sequence Coding sequence

Length: 1461 bp    Location: 27813269..27827434   Strand: +
>XM_004841481.1
ATGCTCGCGGCTCTCGCGCCCGAGAACCCGCCTCCGCGGCGCGCGCGAAGAGTGGCCGCGCAGGACGCACCGGGAATTGTAGTCCCGACTCCTGCAAACACCGTAGGGAAAACGATTTTAGCCTACAAACCCCATGATGCCACGCGGCGCAGGCCACCCCCGGAAGTGCGCCTGGCGCCGGAAGAGAAGACGGCCCCCCTCTCTCTGTCCGGCCATCTTGTGGGAAGAGCTGAAGCAGGCGCTCTTGGCTCGGTGCGGCCCGCTGCAATCCGTGGAGGAACGCGCCGCCGAGCCACCATCATGCCTGGGCACCTACAGGAGGGCTTCGGCTGCGTGGTCACTAACCGATTCGACCAGTTATTTGACGACGAATCGGACCCCTTCGAGGTGCTGAAGGCTGCGGAGAACAAGAAAAAAGAAGCCGGCGGGGGCGGCGTTGGGGGGCCCGGGGCCAAGAGCGCTGCTCAGGCCGCGGCCCAGACCAACTCCACCGCGGCGGGCAAGCAGCTGCGTAAGGAGTCCCAGAAGGACCGCAAGAACCCGCTGCCGCCCAGCGTCGGCGTGGCGGACAAGAAAGAGGAGGCGCAGCCGCCCGTGGCGCTGAAGAAAGAAGGAATAAGACGCGTTGGAAGAAGACCCGATCAGCAACTTCAGGGGGAAGGCAAAATAATTGATAGGAGACCCGAACGGCGACCACCTCGTGAAAGAAGATTTGAAAAACCACTAGAAGAAAAGGGTGAAGGGGGAGAGTTTTCCGTTGATAGGCCCATCATTGAGCGGCCTCTCCGGGGGCGCGGGGGCCTTGGAAGGGGGCGAGGCGGCCGGGGCCGAGGCGTGAGCCGAGGAGATGGGTTCGACTCTCGAGGCAAGCGTGAATTTGACAGGCACAGCGGAAGTGATAGATCTGGCCTGAAGCATGAGGACAAGCGAGGAGGTAGCGGATCTCACAACTGGGGGACTGTCAAAGACGAATTAACTGACTTGGATCAATCAAATGTGCCTGAGGAAACACCAGAAGGTGAAGAGCACCCTGTGGCAGACACTGAAAATAAAGAGAACGAAGTTGAAGAGGTTAAGGAAGAGGGTCCAAAAGAGATGACTTTGGATGAGTGGAAGGCGATCCAAAATAAAGACCGGGCAAAAGTAGAATTTAATATCCGAAAACCAAATGAAGGTGCTGATGGGCAGTGGAAGAAGGGATTTGTTCTTCATAAATCAAAGAGCGAAGAGGCTCACGCTGAAGACTCCGTGATGGACCATCACTTCCGGAAGCCCGCAAATGATATCACGTCCCAGCTGGAGATCAACTTTGGAGACCTTGGCCGCCCAGGGCGGGGCGGCAGGGGAGGACGAGGTGGACGCGGGCGCGGAGGGCGTCCAAACCGTGGCAGCAGGACCGACAAGTCGAGCGCTTCTGCCCCAGATGTGGATGACCCGGAGGCCTTCCCGGCTCTGGCCTAA

Related Sequences

XP_004841538.1 Protein

Serbp1 PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein isoform X4 [Heterocephalus glaber]

Length: 486 aa      View alignments
>XP_004841538.1
MLAALAPENPPPRRARRVAAQDAPGIVVPTPANTVGKTILAYKPHDATRRRPPPEVRLAPEEKTAPLSLSGHLVGRAEAGALGSVRPAAIRGGTRRRATIMPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQTNSTAAGKQLRKESQKDRKNPLPPSVGVADKKEEAQPPVALKKEGIRRVGRRPDQQLQGEGKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIERPLRGRGGLGRGRGGRGRGVSRGDGFDSRGKREFDRHSGSDRSGLKHEDKRGGSGSHNWGTVKDELTDLDQSNVPEETPEGEEHPVADTENKENEVEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMDHHFRKPANDITSQLEINFGDLGRPGRGGRGGRGGRGRGGRPNRGSRTDKSSASAPDVDDPEAFPALA